Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SNRPE
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name small nuclear ribonucleoprotein polypeptide E
Also known as HYPT11|SME|Sm-E|snRNP-E
Coordinate chr1:203861599-203871152
Strand +
Gene summary The protein encoded by this gene is a core component of U small nuclear ribonucleoproteins, which are key components of the pre-mRNA processing spliceosome. The encoded protein plays a role in the 3' end processing of histone transcripts. This protein is one of the targets in the autoimmune disease systemic lupus erythematosus, and mutations in this gene have been associated with hypotrichosis. Several pseudogenes of this gene have been identified. [provided by RefSeq, Jun 2016]

Retrocopy(s) from SNRPE

Retroname Coord Strand Genomic Region ENSG
SNRPEP12 chr1:109591315-109591532 - Intragenic
N/A UCSC
SNRPEP8 chr10:53038406-53038584 + Intergenic
ENSG00000231399 UCSC
SNRPEP10 chr1:223643956-223644390 - Intragenic
ENSG00000227002 UCSC
SNRPEP7 chr1:27211194-27211481 + Intergenic
ENSG00000225990 UCSC
SNRPEP3 chr16:20238816-20239304 - Intergenic
ENSG00000227624 UCSC
SNRPEP4 chr19:5576507-5576951 - Intergenic
ENSG00000233270 UCSC
SNRPEP11 chr2:85261895-85262371 - Intragenic
ENSG00000230299 UCSC
SNRPEP5 chr2:8603066-8603504 + Intergenic
ENSG00000225642 UCSC
SNRPEP13 chr5:160326666-160327125 + Intergenic
ENSG00000270612 UCSC
SNRPEP6 chr6:148567234-148567718 - Intergenic
ENSG00000217824 UCSC
SNRPEP2 chr9:6748552-6749005 - Intragenic
ENSG00000256968 UCSC
SNRPEP9 chrX:24513403-24513705 + Intragenic
ENSG00000214124 UCSC

Expression

Transcript Sequences

>NM_001328637.2
AAGAAAGCGCGGGTAGTTGAACCGTGATGGTGGGGAGGTGGTCTTGGGGGGACCCCTGCCGTGGGGAATGCAGGAATGGACGCGGCAAAAGGAGGGAAGAGAACTTCAGCCACTGTGGTGCAGAACCTCATCTTCAGATACTTACAAAATAGATCGCGGATTCAGGTGTGGCTCTATGAGCAAGTGAATATGCGGATAGAAGGCTGTATCATTGGTTTTGATGAGTATATGAACCTTGTATTAGATGATGCAGAAGAGATTCATTCTAAAACAAAGTCAAGAAAACAACTGGGTCGGATCATGCTAAAAGGAGATAATATTACTCTGCTACAAAGTGTCTCCAACTAGAAATGATCAATGAAGTGAGAAATTGTTGAGAAGGATACAGTTTGTTTTTAGATGTCCTTTGTCCAATGTGAACATTTATTCATATTGTTTTGATTACCCTCGTGTTACTACAAGATGGCAATAAATACTATGGGATTGTTTGTATTAAAAAATTTACATTGCTTCTTACTATTCAGCAGTAGAAACTTTTTACACAGTAACACCATTCGTTGCTGGTATTTAGTTTTCTGAAGGGTCGCAGTTGCCTTGAGCACTTGGTATTCGCAGAGCTTGGACCTGTAGATTTTGAGGCAGATTAGGAATTCTGCCTGATGGGTAAGCTTCCAGTATTGGGAGGTGGAGAAGGGGAGGGTTCAGAAAAATAAATAAGAGTTATTGCACTAACAAAAGTCTTCATCACTTGTAGTTCTGGATGCTGGAATACCAGAGTTTCTAACCTAAATATGTTGGGTACATTATTTAATGGGGTCAGTATTGCTCAACACTCTCATTGAGTCACTGTGAGGTCTTTGTGAATTTTATCGCTAAGATCAGAATGTGAGAAGTATTTGGATATAGGGAAAGAATGAAGTGCCTTTCAAGTACATTAAAAATCAGTTAAGAGTTTACAGGAAAGAGACTGAGATTGGTAATCTGAAAAGGACCACAAGCATAGCTGGTAGGCAAATTGTTAGGCAGAATAATGGTATGTTGGAGAAATACACCTGTCTCTTATTCTTATCTCTTAAGAATTTTGGTTCTTCCCCCAGTGATTGCTGGTTGAATTCTTATATGGACAGGTTTCCCTTCCCCCAGTATCGCACATGGTTCTAGTTAGAATCCTGTTAGATAGTGAGCATCTGCTGTTAGCTAGACACTGTTGAATCAATACAGTGAAACAGACAGGTAAGCAGGTGGTTTTAATGCCTCATTCTAAGTGCTATTTAAATTGGATCTTGAAAGATGAATAAGGCCTGCCTTAAGTTCTGCTAAAGGCCATGTTGTTATTAAGGACGGGTGAGGAAGGACCAAGAAGTCTGGCTCCTGCTTTTCTACATGCCTGTGAAGGAGACTTTTCATGAAACTGAATAAAAGAAATCCTTTCCGAGATAGAGGAGATTTGTAGGTGAATGCAGAAGTGTATCCAGCTTTGAACCATGCATTCCATCTATATTCCTCCTGTCTGAACTCATGCTCTTTTGATTATGTTTTGAAATAAAGGGCTGCATTAGTTCTTTTAA
>NM_001328638.2
AAGAAAGCGCGGGTAGTTGAACCGTGATGGTGGGGAGGTGGTCTTGGGGGGACCCCTGCCGTGGGGAATGCAGGAATGGACGCGGCAAAAGGAGGGAAGAGAACTTCAGAGATCGCGGATTCAGGTGTGGCTCTATGAGCAAGTGAATATGCGGATAGAAGGCTGTATCATTGGTTTTGATGAGTATATGAACCTTGTATTAGATGATGCAGAAGAGATTCATTCTAAAACAAAGTCAAGAAAACAACTGGGTCGGATCATGCTAAAAGGAGATAATATTACTCTGCTACAAAGTGTCTCCAACTAGAAATGATCAATGAAGTGAGAAATTGTTGAGAAGGATACAGTTTGTTTTTAGATGTCCTTTGTCCAATGTGAACATTTATTCATATTGTTTTGATTACCCTCGTGTTACTACAAGATGGCAATAAATACTATGGGATTGTTTGTATTAAAAAATTTACATTGCTTCTTACTATTCAGCAGTAGAAACTTTTTACACAGTAACACCATTCGTTGCTGGTATTTAGTTTTCTGAAGGGTCGCAGTTGCCTTGAGCACTTGGTATTCGCAGAGCTTGGACCTGTAGATTTTGAGGCAGATTAGGAATTCTGCCTGATGGGTAAGCTTCCAGTATTGGGAGGTGGAGAAGGGGAGGGTTCAGAAAAATAAATAAGAGTTATTGCACTAACAAAAGTCTTCATCACTTGTAGTTCTGGATGCTGGAATACCAGAGTTTCTAACCTAAATATGTTGGGTACATTATTTAATGGGGTCAGTATTGCTCAACACTCTCATTGAGTCACTGTGAGGTCTTTGTGAATTTTATCGCTAAGATCAGAATGTGAGAAGTATTTGGATATAGGGAAAGAATGAAGTGCCTTTCAAGTACATTAAAAATCAGTTAAGAGTTTACAGGAAAGAGACTGAGATTGGTAATCTGAAAAGGACCACAAGCATAGCTGGTAGGCAAATTGTTAGGCAGAATAATGGTATGTTGGAGAAATACACCTGTCTCTTATTCTTATCTCTTAAGAATTTTGGTTCTTCCCCCAGTGATTGCTGGTTGAATTCTTATATGGACAGGTTTCCCTTCCCCCAGTATCGCACATGGTTCTAGTTAGAATCCTGTTAGATAGTGAGCATCTGCTGTTAGCTAGACACTGTTGAATCAATACAGTGAAACAGACAGGTAAGCAGGTGGTTTTAATGCCTCATTCTAAGTGCTATTTAAATTGGATCTTGAAAGATGAATAAGGCCTGCCTTAAGTTCTGCTAAAGGCCATGTTGTTATTAAGGACGGGTGAGGAAGGACCAAGAAGTCTGGCTCCTGCTTTTCTACATGCCTGTGAAGGAGACTTTTCATGAAACTGAATAAAAGAAATCCTTTCCGAGATAGAGGAGATTTGTAGGTGAATGCAGAAGTGTATCCAGCTTTGAACCATGCATTCCATCTATATTCCTCCTGTCTGAACTCATGCTCTTTTGATTATGTTTTGAAATAAAGGGCTGCATTAGTTCTTTTAA
>NM_003094.4
CTTTATTCCGGAAGTTGCTCTCAGAGGCAGCGTGCGGGTGTGCTCTTTGTGAAATTCCACCATGGCGTACCGTGGCCAGGGTCAGAAAGTGCAGAAGGTTATGGTGCAGCCCATCAACCTCATCTTCAGATACTTACAAAATAGATCGCGGATTCAGGTGTGGCTCTATGAGCAAGTGAATATGCGGATAGAAGGCTGTATCATTGGTTTTGATGAGTATATGAACCTTGTATTAGATGATGCAGAAGAGATTCATTCTAAAACAAAGTCAAGAAAACAACTGGGTCGGATCATGCTAAAAGGAGATAATATTACTCTGCTACAAAGTGTCTCCAACTAGAAATGATCAATGAAGTGAGAAATTGTTGAGAAGGATACAGTTTGTTTTTAGATGTCCTTTGTCCAATGTGAACATTTATTCATATTGTTTTGATTACCCTCGTGTTACTACAAGATGGCAATAAATACTATGGGATTGTTTGTATTAAAAAATTTACATTGCTTCTTACTATTCAGCAGTAGAAACTTTTTACACAGTAACACCATTCGTTGCTGGTATTTAGTTTTCTGAAGGGTCGCAGTTGCCTTGAGCACTTGGTATTCGCAGAGCTTGGACCTGTAGATTTTGAGGCAGATTAGGAATTCTGCCTGATGGGTAAGCTTCCAGTATTGGGAGGTGGAGAAGGGGAGGGTTCAGAAAAATAAATAAGAGTTATTGCACTAACAAAAGTCTTCATCACTTGTAGTTCTGGATGCTGGAATACCAGAGTTTCTAACCTAAATATGTTGGGTACATTATTTAATGGGGTCAGTATTGCTCAACACTCTCATTGAGTCACTGTGAGGTCTTTGTGAATTTTATCGCTAAGATCAGAATGTGAGAAGTATTTGGATATAGGGAAAGAATGAAGTGCCTTTCAAGTACATTAAAAATCAGTTAAGAGTTTACAGGAAAGAGACTGAGATTGGTAATCTGAAAAGGACCACAAGCATAGCTGGTAGGCAAATTGTTAGGCAGAATAATGGTATGTTGGAGAAATACACCTGTCTCTTATTCTTATCTCTTAAGAATTTTGGTTCTTCCCCCAGTGATTGCTGGTTGAATTCTTATATGGACAGGTTTCCCTTCCCCCAGTATCGCACATGGTTCTAGTTAGAATCCTGTTAGATAGTGAGCATCTGCTGTTAGCTAGACACTGTTGAATCAATACAGTGAAACAGACAGGTAAGCAGGTGGTTTTAATGCCTCATTCTAAGTGCTATTTAAATTGGATCTTGAAAGATGAATAAGGCCTGCCTTAAGTTCTGCTAAAGGCCATGTTGTTATTAAGGACGGGTGAGGAAGGACCAAGAAGTCTGGCTCCTGCTTTTCTACATGCCTGTGAAGGAGACTTTTCATGAAACTGAATAAAAGAAATCCTTTCCGAGATAGAGGAGATTTGTAGGTGAATGCAGAAGTGTATCCAGCTTTGAACCATGCATTCCATCTATATTCCTCCTGTCTGAACTCATGCTCTTTTGATTATGTTTTGAAATAAAGGGCTGCATTAGTTCTTTTAA