Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SELENOK
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Macaca mulatta
Full Name N/A
Also known as SELK
Coordinate chr2:110076408-110083112
Strand -
Gene summary The protein encoded by this gene belongs to the selenoprotein K family. It is a transmembrane protein that is localized in the endoplasmic reticulum (ER), and is involved in ER-associated degradation (ERAD) of misfolded, glycosylated proteins. It also has a role in the protection of cells from ER stress-induced apoptosis. Knockout studies in mice show the importance of this gene in promoting Ca(2+) flux in immune cells and mounting effective immune response. This protein is a selenoprotein, containing the rare amino acid selenocysteine (Sec). Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Multiple pseudogenes of this locus have been identified. [provided by RefSeq, Sep 2017]

Retrocopy(s) from SELENOK

Retroname Coord Strand Genomic Region ENSG
SELENOKP5 chr17:19408971-19409563 - Intergenic
ENSMMUG00000045155 UCSC
SELENOKP1 chr3:121294728-121295101 + Intergenic
N/A UCSC
SELENOKP2 chr4:22285279-22285487 + Intergenic
N/A UCSC
SELENOKP3 chr4:35377519-35378181 - Intragenic
N/A UCSC
SELENOKP4 chr10:68619992-68620665 + Intergenic
N/A UCSC
SELENOKP6 chr17:39326817-39327471 - Intergenic
N/A UCSC
SELENOKP7 chr19:10020380-10020672 - Intergenic
N/A UCSC
SELENOKP8 chr19:36936734-36937278 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001159381.2
CAGAGGCCGAGAGGGGCCAGGCGCCCGGTCGATCTGAAGCCGGGTAGTGGGAGAAGATGGTTTACATCTCGAACGGACAAGTGTTGGACAGCCGGAGTCAGTCTCCATGGAGATTATCTTTGATAACAGATTTCTTCTGGGGAATAGCTGAGTTTGTGGTTTTGTTTTTCAAAACTCTGCTTCAGCAAGATGTGAAAAAAAGAAGAAGCTATGGAAACTCATCTGATTCCAGATATGATGATGGAAGAGGGCCACCGGGAAACCCTCCCCGAAGAATGGGTAGAATCAATCATCTGCGTGGCCCTAGTCCTCCTCCAATGGCGGGTGGATGAGGAAGGTAAATGTCTGCTCTAAGAAGCAGACAACTGGACATGCACATTCACAGCAGAAGGAAACCATCAAGAAGTGGAAGGCCGACCATGCTGAGCCGTAGATGAATGTGTCTGTCTAAACAAGGACTGCTCTGTGTCCTCACAGATGAATGAGGTCATGCTAGGAATTCCCTCTACAGGGAACTGGCCTGACTGACATGCAGTTCCATAAATGCAGATGTTTGTCTCATGACCTTTTTGTATAGTTTATTAAAGTATTAATATAGTTTTAATAAGTAAATATTTTTAGGTTGCAGAGTGGACTCCTCATCTTTATATTCACGAAAAAACAATCTGAAGAAAATAAATAAAAGCCTGTGTATTTAGCA