Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name CBLL1
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name Cbl proto-oncogene like 1
Also known as HAKAI|RNF188
Coordinate chr7:107743836-107764997
Strand +
Gene summary This gene encodes an E3 ubiquitin-ligase for the E-cadherin complex and mediates its ubiquitination, endocytosis, and degradation in the lysosomes. The encoded protein contains a RING-finger domain and is also thought to have a role in control of cell proliferation. A related pseudogene has been identified on chromosome X. Alternative splicing results in a non-coding transcript variant. [provided by RefSeq, Aug 2011]

Retrocopy(s) from CBLL1

Retroname Coord Strand Genomic Region ENSG
CBLL1P1 chrX:121025408-121026100 - Intergenic
ENSG00000233433 UCSC
CBLL1P2 chrX:22273106-22273488 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_024814.4
ACTGTGCTCTGCGAGCCGAATCATGGATCACACTGACAATGAGTTACAAGGCACTAATAGTTCTGGATCCTTGGGTGGTCTTGATGTTCGCAGACGAATTCCTATAAAGCTCATCTCCAAACAAGCAAACAAAGCGAAACCTGCACCGCGAACTCAAAGAACTATAAACAGGATGCCTGCAAAGGCTCCACCTGGTGATGAAGAAGGATTTGATTATAATGAAGAAGAACGGTATGACTGTAAAGGGGGTGAGCTGTTTGCAAATCAGCGAAGATTTCCTGGACACCTTTTTTGGGACTTTCAGATAAACATCTTAGGTGAAAAGGATGATACACCAGTTCATTTCTGTGACAAGTGTGGATTGCCTATTAAAATCTATGGGAGAATGATTCCATGCAAGCATGTTTTTTGCTATGACTGTGCTATTTTACATGAAAAAAAGGGAGATAAGATGTGTCCAGGCTGTAGTGATCCTGTGCAGCGAATTGAGCAGTGTACACGAGGTTCTCTCTTCATGTGTAGCATTGTTCAAGGGTGCAAGAGAACATATTTGTCTCAGAGAGACTTACAGGCTCATATCAACCATCGCCATATGAGAGCTGGAAAACCTGTTACCCGTGCTTCACTTGAAAATGTTCATCCTCCTATTGCCCCACCACCAACTGAAATCCCTGAGCGTTTTATAATGCCACCAGACAAGCACCATATGAGCCATATTCCGCCAAAGCAGCACATCATGATGCCACCACCTCCTTTGCAACATGTGCCACATGAGCACTATAATCAGCCACATGAGGATATTCGTGCTCCTCCAGCAGAATTGTCCATGGCTCCACCTCCACCTCGATCGGTCAGTCAGGAAACCTTTCGTATTTCAACAAGAAAACACAGCAATTTAATAACCGTCCCTATTCAGGATGACTCAAATTCAGGTGCTAGAGAACCACCACCTCCTGCCCCAGCACCTGCTCACCATCATCCTGAATATCAGGGTCAACCAGTGGTATCGCACCCTCATCATATTATGCCTCCACAGCAACATTATGcaccacccccacctcctccaccaccaATAAGCCATCCAATGCCACATCCTCCCCAGGCTGCAGGTACTCCTCACTTGGTATATAGCCAAGCTCCACCTCCACCAATGACCTCTGCTCCACCACCAATAACCCCTCCCCCTGGACATATTATTGCCCAGATGCCACCTTATATGAATCATCCTCCTCCAGGACCTCCCCCACCTCAACATGGTGGTCCACCTGTAACTGCACCCCCTCCTCACCATTATAATCCTAACTCATTACCCCAGTTCACTGAAGATCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGGGGAATGAGTCCTGGTATATGGCCTGCACCAAGAGGGCCACCACCACCTCCACGATTGCAGGGTCCGCCTTCTCAAACCCCACTTCCTGGACCACATCATCCAGATCAGACAAGATATAGACCGTATTACCAATGATAATAGTATTTTGAATGGAAGATATGAGGGGGAAAAAAACTTATGTGTAGTCAATCTTTTAAGCTTTGACTGTTTTGGGAAGGAAGAGTACCTCTTATCGAGGTAGTATAAAACACATAGGGTCTTGTTTCTTAAAATGGTTTTAAATCTTGACCTTAAGATTGATTTCAAGTACCATACTGTAGTACAGATAAGTGGCTCAGTTGAGCACAGCTATATTTTAACATCTCTTTGTTCCCCTAGTTTAGTAAATTGACCCAGAGGTGACCATTTGTAAAAAATTTGAAAAAATTTTTCATTGTTTTACTTCAAAAGTATTGTTTTGTTAAACCCAACGTTTAGTTTTTCTTGTGATACATTTTGTTAACCTGTGTAAAAGGATTAAATTTCAATATGGTTGTAAAAATGCTATTTTTATGTGAATTTAAGTGCAGCCACATACTGTTTTTTAAACCATATGTTTTACCACTAATTTCCCAAAGTTATAATAAAATCCTGAAAGTAAAAATCTACTAGAATTTGCTGTAAGGCAGACTGTTAAATGATAGAGAATTATTTCACATTTTAGGCACTGAAATGTTGAGGTTTCGAGGTATAGTAAGTATACAATGCACTTCACTTGGATGCCTTTTCATTTTTAGGCAGCCTCAGGAGCACCAAAATACATTGGAATTCTAGTACTAAGATATATTTGTTCGTAATGTTAAAAGACATTACTAATTATTTGGAAAGAGATGGCCAAAATAATCAACTCTACAGGCTTCAAGCTGGTGGGGGAATGCTGTTACTCATTAATGCTTTTTTACTGAATGGTCGGAATCACATATGCACCACACATACTGATCTTAAGTAACATTATTTTATAGAACTGTTTAAATGGGTTTAAATGGTGTTCTTTAGATGAAATGTGTTCTGTTTTGTTCATTGTCTTAAACTGAATAGGGCTGAATAGGCTTTATGTAATTCTTCATTTCATGGTAGAGTTTGATGCTGTGTTTAAGTGGGTTCTTGTTTATAGGATTTTCAACTACAGTTTGAATGCCATGGAGGAATTTGAATAATATATTAATGAAGGACATATTCTTGTAATCACAAATTTGCATTTGCTCAGGTTTCATTGCTGTGTGATAGGATTTTTCCTCTAACTTGAAATTTAAAAACTTTTATTTCCTATTCCTTTTGTCGGTAAAGCAGTCTGAATTTGGAACATTTTATCATGGAGTCAACAGTGAAGACTACCAGATAATTTTGTATTGGAGAAGAGGAAATAACAGCTAAATTGTGGATTTCAGTGCTTTACATGGTGCCTTTCGAGTCAGCTTTTACATTATAGGGGCTTGTTATAGTTTAGCTAAGATGACCACTTAACAGTTTATACAGAACTCATATGTATAAATCAACATTCTTAGGATATTATTTATATCCTTTGAATAAATCCCTGTGAAGTTTTTCCTCCCCACTAAAATGGTGCATAATAAAACATGAAATATGTAGTATGCAGATATCATTTATTAGATAGTTTGTAGTGTATACATTTAGAACATACTTCTTTTGACAAAGGGTGATCTGATTGCTAATTTACCATTTTATTCTGTCAGGTACAGGTGAAACAAATTCTCATCTTGAATGATCAGATGCAAAATCATTTCTGAACCCTAGAGCAGAAGTTAGAAATAACAAAATGGCCGTTTCAACCTTGACTGGCCAAAAATAACTAATAAACTTTTTTGTTTTAAGTCAGGCAAGTGATTTTCTACATTTAGCAGTTTGAAAGTCCAGTGTTAATGCAATATTTCTAGTGAGAAATGCTTGTTATTAAAAGCATGGGAGTGATAGTGTGAAATGGTGGTGAGTGCTTCTATCATATTACTGTAGGTACTTGGACTGGTGCAAACTTGATTCCTTTTCATCCCCCTGTTTAGGAGCTATTAAAATATTACTGTTAAAAATCCAAACCATTCTTTGTTCCATGTAATAAGAAAATAGCCAAAATCACTTTAGAGCTTCTCAACTATTTATGAAGAGCTATCCTGCTTTTATTGAAAGTCACTAGAGTTGAATGTGGTAAGAAACCACTTAGCCTATGTATTGGACGAGAAAATCAGTATCATGATAAAATTTTGAATTAAGAGAACCCTTGTAGAGTTTTTAAAAAATGATTTATTTTCAATTAGGTTTAAGAAATCTATGTTATGCAGGGAGGCATATCAGATGAATGTTGTAGCAGACAAAAGTTTTAAATCGTGTTAGACTTGAATTCATCAATTGTTTGAATGAGGGTGGGTGGGTAGAAGGATAACAAAATTACTGTTAGTGTTTCTTTCCTTACGGAAAAAGATGTGAATCCCAGCCTTATTTCAGGGAAGCCTTTGAAGCTATGATGGACATAAGTCTAAATTAAATGTATGTATGTTTCATTATATTGCTCTTAAGACTACTGAGGTGGCAGTTTAATTCTTAAAAACAATAAAATGGAAGCATAAATACTA