Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ZCRB1
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name zinc finger CCHC-type and RNA binding motif containing 1
Also known as MADP-1|MADP1|RBM36|SNRNP31|ZCCHC19
Coordinate chr12:42312086-42326107
Strand -
Gene summary Pre-mRNA splicing is catalyzed by the spliceosome. U12-type spliceosome binds U12-type pre-mRNAs and recognizes the 5' splice site and branch-point sequence. U11 and U12 snRNPs are components of U12-type spliceosome and function as a molecular bridge connecting both ends of the intron. The protein encoded by this gene contains a RNA recognition motif. It was identified as one of the protein components of U11/U12 snRNPs. This protein and many other U11/U12 snRNP proteins are highly conserved in organisms known to contain U12-type introns. These proteins have been shown to be essential for cell viability, suggesting the key roles in U12-type splicing. [provided by RefSeq, Jul 2008]

Retrocopy(s) from ZCRB1

Retroname Coord Strand Genomic Region ENSG
ZCRB1P2 chr15:78290606-78290797 - Intragenic
ENSG00000259562 UCSC
ZCRB1P3 chr16:69264133-69264947 + Intragenic
N/A UCSC
ZCRB1P1 chrX:71312324-71315996 - Intergenic
ENSG00000224208 UCSC

Expression

Transcript Sequences

>NM_033114.4
AAACAGTCGGGAAGAAGCACCGTGGCTGCTATTATCTGCTCTCCGCGCCTGACCCCTCCCAGGACTCGTGATGCCAAGGCCGCTGCGAGCGGCTACGAAGAGTCGGGGTTGAGCCCCAGCTGAGCCGAGGGCTCGCACTCTTCTGGTCTCCCAGGCCCAACCCACCTGAAGAAATGAGTGGTGGATTGGCTCCAAGTAAGAGCACAGTGTATGTATCCAACTTGCCTTTTTCCCTGACAAACAATGACTTGTACCGGATATTTTCCAAGTATGGCAAAGTTGTAAAGGTTACCATCATGAAAGATAAAGATACCAGGAAGAGTAAAGGGGTTGCATTTATTTTATTTTTGGATAAAGACTCTGCACAAAACTGTACCAGGGCAATAAACAACAAACAGTTATTTGGTAGAGTGATAAAAGCAAGCATTGCTATTGACAATGGAAGAGCAGCTGAGTTCATCCGAAGGCGAAACTACTTTGATAAATCTAAGTGTTATGAATGTGGGGAAAGTGGACACTTAAGTTATGCCTGTCCGAAAAATATGCTCGGAGAACGTGAGCCTCCaaagaagaaagaaaaaaagaaaaaaaagaaagctcctgaaccagaagaagaaATTGAGGAAGTAGAAGAAAGTGAAGATGAAGGGGAGGATCCTGCTCTTGACAGCCTCAGTCAGGCCATAGCATTCCAGCAAGCCAAAATTGAAGAAGAACAAAAAAAATGGAAACCCAGTTCAGGAGTCCCCTCAACATCAGATGATTCAAGACGCCCAAGGATAAAGAAAAGCACATATTTCAGTGATGAGGAAGAACTTAGTGATTAAAATCTTGCCCCAGCACAGTAATAAAAATCAAGATTTGTTAGTAACAATCTTGAAGAGCTAATTTTAATAAAAATAAGAAAAATTAATACTATCATGTTAATACTATTATTGTCATCCCAAGAAAAAAGATATTTTAAAAATTTATTTGAAAAGTTCATTATAAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCTTAAAACAAACTTCCTGAAGACCGAAAAGTTGAATGATTTATTGTTACTTATATTAATAAACTTTTCAAGAGAATTTTGTCTTTAAATATGGGTGTTTTGTCATCATATTTCTTGTAGCTTTATCCCAATCTGGataaattgtaaatacctataaaataaattataaatacctataaaatataaagtaACATAGCTCTAAAAGGCTTAAAATCAAACACAGGTGTTATTTGTCTGCCCTACCCATAGCACCAAATTCCATTCCCTAGAAGAAACTACTTACATGTGCACACATGTAGCTAAATAAAGTACATATATTTCAGTCACTTAATAAAAGAATAAAGGAGAATTATTCAATCTCTTATACTTCTCCTACCttcctcaatattcccaatgtggctgtattaaaaatttgggggaatccatatatatcttttttaataaccaagtaaatacttttcatttctgagccaaggaatatgctatgattacgttttttcctagagttaataattgtctattttttttccatgtattgtctttgtatttatgactaaatcttcccATTCTGTCTGCAGGTGGGTATATGGTAATGGGATTAGAGAGCCTTTAATTTTCTGCTTTGTATATTTCTATATTGTTTAACTTTGTAAGAATGCCCATTACTTTTTtaactagtaaaagcaatagaaataagttaatactatcatagtaatattattaTTGTCATCCCAAGAAAAAATATATTAAAAAGATATTTGAAATTTCA