| Name | Zebra Finch |  |
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| Sci Name | Taeniopygia guttata | |||
| Assembly_ID | GCF_008822105.2 | |||
| Assembly_Name | bTaeGut2.pat.W.v2 |  |
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| # of retrocopies | 83 | |||
| # of Parental genes | 60 |
| Retroname | Chr | Start | End | Strand | Ensembl | |
|---|---|---|---|---|---|---|
| ACTA2P1 | chr14 | 5071712 | 5072870 | - | N/A | UCSC |
| ACTBP1 | chr3 | 69897342 | 69897672 | - | N/A | UCSC |
| ACTBP2 | chr5 | 32952241 | 32952560 | + | N/A | UCSC |
| ACTC1P1 | chr18 | 1537642 | 1538001 | + | N/A | UCSC |
| ACTG2P1 | chr10 | 2205570 | 2206757 | + | N/A | UCSC |
| ADIPOR1P1 | chr1 | 26840807 | 26841097 | + | N/A | UCSC |
| ARF3P1 | chr5 | 60122300 | 60122582 | - | N/A | UCSC |
| BCAS2P1 | chr5 | 14289523 | 14290321 | + | N/A | UCSC |
| BUD31P1 | chr12 | 18696061 | 18697022 | + | N/A | UCSC |
| CCDC171P1 | chrZ | 20869962 | 20870227 | - | N/A | UCSC |
| CFHP1 | chr1A | 65111753 | 65112251 | - | N/A | UCSC |
| CFHP2 | chr5 | 9862158 | 9862992 | + | N/A | UCSC |
| CLASP1P1 | chrZ | 63176100 | 63178485 | - | N/A | UCSC |
| CPOXP1 | chrW | 3041809 | 3042248 | - | N/A | UCSC |
| DNAJC15P1 | chr1 | 47952709 | 47952849 | + | N/A | UCSC |
| DNAJC15P2 | chr2 | 89030594 | 89030872 | - | N/A | UCSC |
| DNAJC15P3 | chr2 | 96437657 | 96437897 | + | N/A | UCSC |
| DNAJC15P4 | chr8 | 8443267 | 8443482 | + | N/A | UCSC |
| DNAJC15P5 | chrZ | 10559569 | 10559858 | - | N/A | UCSC |
| ENO1P1 | chr3 | 25273303 | 25273566 | - | N/A | UCSC |
| FSD1LP1 | chr3 | 20050073 | 20051120 | - | N/A | UCSC |
| GET4P1 | chrZ | 36951730 | 36953159 | - | N/A | UCSC |
| GLE1P1 | chr3 | 28044641 | 28044917 | - | N/A | UCSC |
| HPCAL4P1 | chr23 | 2475563 | 2475734 | + | N/A | UCSC |
| HSPA8P1 | chr5 | 54843998 | 54845069 | - | N/A | UCSC |
| ISY1P1 | chr1 | 103305780 | 103306724 | - | N/A | UCSC |
| KINP1 | chr1A | 57447214 | 57448459 | - | N/A | UCSC |
| LOC100219447P1 | chr2 | 83081497 | 83081679 | + | N/A | UCSC |
| LOC100223131P1 | chr7 | 10225262 | 10226189 | - | N/A | UCSC |
| LOC100223131P2 | chr29 | 314558 | 315484 | - | N/A | UCSC |
| LOC100228280P1 | chr1 | 86166245 | 86166415 | + | N/A | UCSC |
| LOC100228280P2 | chr3 | 38978068 | 38978238 | + | N/A | UCSC |
| LOC100228280P3 | chr4A | 4374912 | 4375092 | - | N/A | UCSC |
| LOC100228280P4 | chr23 | 375218 | 375394 | + | N/A | UCSC |
| LOC100228594P1 | chr7 | 28645238 | 28646152 | + | N/A | UCSC |
| LOC101233155P1 | chr2 | 74419045 | 74419195 | + | N/A | UCSC |
| LOC101233155P2 | chr2 | 77679482 | 77679632 | - | N/A | UCSC |
| LOC101233155P3 | chr3 | 82711478 | 82711713 | - | N/A | UCSC |
| LOC101233155P4 | chr4 | 59313252 | 59313451 | - | N/A | UCSC |
| LOC101233155P5 | chr28 | 92877 | 93586 | + | N/A | UCSC |
| LOC101233155P6 | chrW | 15598649 | 15599441 | + | N/A | UCSC |
| LOC101233943P1 | chrW | 14132860 | 14134617 | + | N/A | UCSC |
| LOC101233943P2 | chrW | 15682673 | 15682977 | - | N/A | UCSC |
| LOC101233943P3 | chrW | 4857200 | 4858347 | + | N/A | UCSC |
| LOC101233943P4 | chrW | 8003482 | 8003984 | + | N/A | UCSC |
| LOC105759033P1 | chrZ | 18646733 | 18646989 | + | N/A | UCSC |
| LOC105760992P1 | chr2 | 83065107 | 83065286 | + | N/A | UCSC |
| LOC115492167P1 | chr12 | 725425 | 725622 | - | N/A | UCSC |
| LOC115492167P2 | chr26 | 1781343 | 1781647 | + | N/A | UCSC |
| LOC115493148P1 | chr1A | 45850580 | 45850987 | - | N/A | UCSC |
| LOC115498367P1 | chrW | 15548347 | 15550192 | + | N/A | UCSC |
| LOC116807077P1 | chrW | 10771639 | 10773162 | - | N/A | UCSC |
| LOC116807077P2 | chrW | 1743624 | 1745123 | + | N/A | UCSC |
| LOC116807077P3 | chrW | 18617487 | 18619000 | - | N/A | UCSC |
| LOC116807101P1 | chrW | 7988042 | 7988600 | + | N/A | UCSC |
| LOC116807536P1 | chrW | 8088573 | 8089075 | - | N/A | UCSC |
| LOC116807778P1 | chr13 | 11802305 | 11802674 | + | N/A | UCSC |
| PFKFB2P1 | chr1A | 3545843 | 3545985 | + | N/A | UCSC |
| PPIL4P1 | chr1A | 57456123 | 57457439 | - | N/A | UCSC |
| PPIL4P2 | chr11 | 4133831 | 4133985 | + | N/A | UCSC |
| PRPF18P1 | chr4 | 11881057 | 11881436 | + | N/A | UCSC |
| PRPF6P1 | chr4 | 53451367 | 53454220 | - | N/A | UCSC |
| PWWP3AP1 | chr1 | 92052286 | 92052604 | + | N/A | UCSC |
| RAB7AP1 | chrW | 1862104 | 1863612 | - | N/A | UCSC |
| RAP2AP1 | chr9 | 24963727 | 24964089 | - | N/A | UCSC |
| RHOCP1 | chr3 | 7830595 | 7831008 | - | N/A | UCSC |
| RNF113A2P1 | chr1A | 57460187 | 57461193 | - | N/A | UCSC |
| RPAP2P1 | chr4 | 20646362 | 20648245 | + | N/A | UCSC |
| RPS27AP1 | chr23 | 4768800 | 4769983 | - | N/A | UCSC |
| RPS6P1 | chrZ | 47649563 | 47651634 | + | N/A | UCSC |
| SAP30BPP1 | chr4A | 5280548 | 5281319 | + | N/A | UCSC |
| SAP30P1 | chr5 | 34491968 | 34492114 | + | N/A | UCSC |
| SHCBP1P1 | chr3 | 15956063 | 15958895 | - | N/A | UCSC |
| SP1P1 | chr2 | 30947265 | 30947515 | - | N/A | UCSC |
| SP1P2 | chr7 | 14462920 | 14463193 | + | N/A | UCSC |
| SP1P3 | chr7 | 15830857 | 15831085 | + | N/A | UCSC |
| SUMF1P1 | chr2 | 22215823 | 22216035 | + | N/A | UCSC |
| TDP2P1 | chrZ | 39789599 | 39792335 | + | N/A | UCSC |
| TENT5BP1 | chr3 | 32278075 | 32278302 | - | N/A | UCSC |
| TJP1P1 | chr2 | 80214713 | 80214878 | + | N/A | UCSC |
| TUBA8P1 | chr1A | 1458503 | 1459405 | + | N/A | UCSC |
| UBE2NP1 | chr7 | 32922087 | 32922295 | - | N/A | UCSC |
| YJU2P1 | chr4 | 849006 | 850029 | + | N/A | UCSC |