Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name COX6C
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name cytochrome c oxidase subunit 6C
Also known as -
Coordinate chr8:99877865-99893707
Strand -
Gene summary Cytochrome c oxidase, the terminal enzyme of the mitochondrial respiratory chain, catalyzes the electron transfer from reduced cytochrome c to oxygen. It is a heteromeric complex consisting of 3 catalytic subunits encoded by mitochondrial genes and multiple structural subunits encoded by nuclear genes. The mitochondrially-encoded subunits function in electron transfer, and the nuclear-encoded subunits may be involved in the regulation and assembly of the complex. This nuclear gene encodes subunit VIc, which has 77% amino acid sequence identity with mouse subunit VIc. This gene is up-regulated in prostate cancer cells. A pseudogene has been found on chromosomes 16p12. [provided by RefSeq, Jul 2010]

Retrocopy(s) from COX6C

Retroname Coord Strand Genomic Region ENSG
COX6CP17 chr10:7294979-7295246 - Intragenic
ENSG00000235141 UCSC
COX6CP15 chr10:77433460-77433663 - Intragenic
ENSG00000228092 UCSC
COX6CP18 chr11:2771376-2771713 + Intragenic
ENSG00000236041 UCSC
COX6CP25 chr11:42939870-42940063 + Intergenic
ENSG00000254914 UCSC
COX6CP26 chr11:65603998-65604202 + Intragenic
N/A UCSC
COX6CP27 chr11:74142266-74142493 + Intragenic
ENSG00000256098 UCSC
COX6CP5 chr11:7977660-7977811 + Intergenic
ENSG00000254642 UCSC
COX6CP11 chr14:77652704-77652963 - Intergenic
ENSG00000258668 UCSC
COX6CP4 chr15:36572103-36572311 + Intergenic
ENSG00000270500 UCSC
COX6CP1 chr16:11903800-11904193 - Intragenic
ENSG00000260318 UCSC
COX6CP13 chr1:65298612-65298952 - Intragenic
ENSG00000234144 UCSC
COX6CP16 chr16:85278587-85278951 - Intragenic
ENSG00000270313 UCSC
COX6CP28 chr16:8731263-8731409 - Intragenic
N/A UCSC
COX6CP3 chr18:1176654-1177068 - Intergenic
ENSG00000266251 UCSC
COX6CP19 chr1:92029455-92029705 + Intergenic
N/A UCSC
COX6CP7 chr19:49501982-49502708 - Intergenic
ENSG00000268681 UCSC
COX6CP29 chr20:33629190-33629331 - Intragenic
N/A UCSC
COX6CP2 chr20:50479715-50480105 + Intergenic
ENSG00000231715 UCSC
COX6CP20 chr2:160531201-160531468 + Intergenic
N/A UCSC
COX6CP21 chr2:199872303-199872515 + Intergenic
ENSG00000227004 UCSC
COX6CP10 chr3:33554615-33554989 + Intragenic
ENSG00000238008 UCSC
COX6CP6 chr3:70751069-70751462 + Intergenic
ENSG00000240156 UCSC
COX6CP22 chr4:54076769-54076974 + Intergenic
ENSG00000251105 UCSC
COX6CP23 chr4:75583315-75583714 - Intragenic
N/A UCSC
COX6CP24 chr4:77864508-77864688 - Intragenic
ENSG00000250214 UCSC
COX6CP8 chr8:64331877-64332284 + Intergenic
ENSG00000253231 UCSC
COX6CP12 chrX:68645190-68645415 - Intergenic
ENSG00000234463 UCSC

Expression

Transcript Sequences

>NM_004374.4
ATTCTGCGCCTGCGCGCGGCTACAGCACGGTTCGTTTTTCCTTTAGTCAGGAAGGACGTTGGTGTTGAGgttagcaTACGTATCAAGGACAGTAACTACCATGGCTCCCGAAGTTTTGCCAAAACCTCGGATGCGTGGCCTTCTGGCCAGGCGTCTGCGAAATCATATGGCTGTAGCATTCGTGCTATCCCTGGGGGTTGCAGCTTTGTATAAGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAGGAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCACTGACTTGTGTTCCTGAACTATGACACATGAATATGTGGGCTAAGAAATAGTTCCTCTTGATAAATAAACAATTAACAAATACTTTGGACAGTAAGTCTTTCTCAGTTCTTAATGATAATGCAGGGCACTTACTAGCATAAGAATTGGTTTGGGATTTAACTGTTTATGAAGCTAACTTGATTTCCGTGTTTTGTTAAAATTTCATTGTTCTAGCACATCTTTAACTGTGATAGTTTGTCCGTTTCATTGCAGTTACTTGGTCTTGGGCTATGGATTAAAAAGTGTTCTTCATGAGCCTGTAAGACTACTGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAAATCTATCCTTGGCCTTCA