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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL12
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L12
Also known as L12
Coordinate chr9:127447674-127451406
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L11P family of ribosomal proteins. It is located in the cytoplasm. The protein binds directly to the 26S rRNA. This gene is co-transcribed with the U65 snoRNA, which is located in its fourth intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL12

Retroname Coord Strand Genomic Region ENSG
RPL12P26 chr10:117196202-117196723 - Intergenic
ENSG00000236171 UCSC
RPL12P28 chr10:5862201-5862582 - Intergenic
ENSG00000240180 UCSC
RPL12P8 chr10:67874331-67874891 + Intergenic
ENSG00000219932 UCSC
RPL12P29 chr10:84389119-84389701 - Intragenic
ENSG00000233189 UCSC
RPL12P27 chr10:97309095-97310040 - Intergenic
ENSG00000237169 UCSC
RPL12P46 chr11:115578058-115578199 + Intergenic
ENSG00000255903 UCSC
RPL12P30 chr11:30368249-30368688 + Intergenic
ENSG00000242353 UCSC
RPL12P31 chr11:35997224-35997761 - Intragenic
ENSG00000241228 UCSC
RPL12P14 chr1:15792726-15793339 + Intergenic
ENSG00000224321 UCSC
RPL12P33 chr12:120916654-120917281 + Intergenic
ENSG00000244585 UCSC
RPL12P32 chr12:31948245-31948871 + Intergenic
ENSG00000242314 UCSC
RPL12P13 chr1:26980083-26981023 + Intergenic
ENSG00000172746 UCSC
RPL12P5 chr14:30791097-30791489 + Intergenic
ENSG00000243855 UCSC
RPL12P6 chr14:34740290-34740850 - Intergenic
ENSG00000243824 UCSC
RPL12P7 chr14:68693098-68693538 + Intergenic
ENSG00000242941 UCSC
RPL12P35 chr15:72379173-72379798 - Intergenic
ENSG00000243007 UCSC
RPL12P36 chr16:58825993-58826291 + Intergenic
ENSG00000242423 UCSC
RPL12P38 chr17:60433681-60434300 - Intergenic
ENSG00000213228 UCSC
RPL12P37 chr17:80976398-80976990 + Intergenic
ENSG00000240270 UCSC
RPL12P40 chr18:37672852-37673219 + Intergenic
ENSG00000243516 UCSC
RPL12P42 chr19:13158312-13158871 - Intergenic
ENSG00000213253 UCSC
RPL12P41 chr19:46219340-46219966 + Intergenic
ENSG00000269637 UCSC
RPL12P12 chr20:19823406-19824031 - Intragenic
ENSG00000236992 UCSC
RPL12P3 chr20:33272281-33272652 - Intergenic
ENSG00000233106 UCSC
RPL12P11 chr20:41547353-41547966 + Intragenic
ENSG00000232493 UCSC
RPL12P4 chr20:55074558-55075178 + Intergenic
ENSG00000185834 UCSC
RPL12P15 chr2:121658422-121659047 - Intergenic
ENSG00000230993 UCSC
RPL12P16 chr2:203190691-203191319 + Intergenic
ENSG00000204196 UCSC
RPL12P17 chr2:208057201-208057830 - Intergenic
ENSG00000224839 UCSC
RPL12P19 chr2:44270532-44271155 + Intergenic
ENSG00000226972 UCSC
RPL12P18 chr2:84874536-84875055 + Intragenic
ENSG00000213400 UCSC
RPL12P44 chr3:44937584-44938525 + Intragenic
ENSG00000227123 UCSC
RPL12P20 chr4:41389303-41389632 + Intragenic
ENSG00000239627 UCSC
RPL12P21 chr5:139035106-139035563 - Intragenic
ENSG00000242683 UCSC
RPL12P1 chr6:33400014-33400644 - Intragenic
ENSG00000204194 UCSC
RPL12P2 chr6:37091226-37091845 + Intergenic
ENSG00000216412 UCSC
RPL12P47 chr6:43310230-43310404 + Intergenic
ENSG00000219222 UCSC
RPL12P10 chr7:22881890-22882429 + Intergenic
ENSG00000226279 UCSC
RPL12P24 chr8:105737238-105737564 - Intragenic
ENSG00000243601 UCSC
RPL12P48 chr8:37983071-37983898 + Intergenic
ENSG00000270865 UCSC
RPL12P25 chr9:477853-478316 + Intragenic
ENSG00000235330 UCSC
RPL12P43 chrX:118145988-118146604 + Intergenic
ENSG00000234524 UCSC
RPL12P50 chrX:151023562-151023731 - Intergenic
ENSG00000270916 UCSC

Expression

Transcript Sequences

>NM_000976.4
CCTCTCGGCTTTCGGCTCGGAGGAGGCCAAGGTGCAACTTCCTTCGGTCGTCCCGAATCCGGGTTCATCCGACACCAGCCGCCTCCACCATGCCGCCGAAGTTCGACCCCAACGAGATCAAAGTCGTATACCTGAGGTGCACCGGAGGTGAAGTCGGTGCCACTTCTGCCCTGGCCCCCAAGATCGGCCCCCTGGGTCTGTCTCCAAAAAAAGTTGGTGATGACATTGCCAAGGCAACGGGTGACTGGAAGGGCCTGAGGATTACAGTGAAACTGACCATTCAGAACAGACAGGCCCAGATTGAGGTGGTGCCTTCTGCCTCTGCCCTGATCATCAAAGCCCTCAAGGAACCACCAAGAGACAGAAAGAAACAGAAAAACATTAAACACAGTGGGAATATCACTTTTGATGAGATTGTCAACATTGCTCGACAGATGCGGCACCGATCCTTAGCCAGAGAACTCTCTGGAACCATTAAAGAGATCCTGGGGACTGCCCAGTCAGTGGGCTGTAATGTTGATGGCCGCCATCCTCATGACATCATCGATGACATCAACAGTGGTGCTGTGGAATGCCCAGCCAGTTAAGCACAAAGGAAAACATTTCAATAAAGGATCATTTGACAACTGGTGGA