Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Retrocopy Name ZNF732P2
Plot displaying the genomic locations of a retrocopy (in chr19) and its respective parental gene (in chr4). Each line represents a retrocopy.
Species Pan paniscus
Coordinates chr19:20595408-20595634  UCSC
Strand +
Parental Sequence XM_034958100.1
Parental seq. overlap 193 bp
Parental seq. overlap (%) 6%
Genomic Region Intragenic (ZNF738)
Retrocopy Summary ZNF732P2, located on chr19:20595408-20595634, is a retrocopy of the parental gene ZNF732. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name ZNF732
Full Name N/A
Also known as -
Coordinate chr4:273229-309179
Strand -
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Gorilla Gorilla gorilla LOC109024078P2
Gibbon Nomascus leucogenys LOC100585703P4
Crab-eating macaque Macaca fascicularis LOC102128845P4
Baboon Papio anubis LOC101000404P6
Golden snub-nosed monkey Rhinopithecus roxellana LOC115892070P2
Mouse lemur Microcebus murinus LOC109730347P2
Rabbit Oryctolagus cuniculus LOC100340194P2
Cow Bos taurus LOC104974936P1
Tasmanian Devil Sarcophilus harrisii LOC100917187P4
Opossum Monodelphis domestica LOC100616802P19
Human Homo sapiens Without Homology
Chimpanzee Pan troglodytes Without Homology
Orangutan Pongo abelii Without Homology
Green monkey Chlorocebus sabaeus Without Homology
Rhesus Macaca mulatta Without Homology
Marmoset Callithrix jacchus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Pig Sus scrofa Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>ZNF732P2
GCCTTACTACACATAAGAGAATCCATACTGGTGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACATAAGATAATTCATACTGGAGAGAGACCCTACAAGTGTGAAGAATGTGGCAAAGCCTTTAATGTATTCTCAACCCTTACTAAACATAAGAGAATTCATAATGGAGAGAAACCCTACAAATGTTTAGAATGT
>XM_034958100.1
ataggttaaaattataaacaatttcacttgtttctttttattatttttgatgtggctaataaaaaattgaaaattcacaaatagctaacattttatttttTAAAGGATTGCTTCCCCCTTAAAATCCTACTCAAAAGACCAGAGGACAGAGAGGTTATGAAATCTAAAATATTAAAATAATTGTCATTATATTGTTTCCATTTGTGAACAAgtgtgtgtctgtgtgtgtgCGCGCGCGTACGTACACAATTGATAAACGGGCGTAACCTTACACACCAGAAGGTTAAAAATGAACCCCCAACAGAGCCAAGCCTAGCACAGAAAGCCCTGACTGAAAATACCTGGAGGCACGAGTCTGTCTCTCTTGCCTCATTAAGTGCACTGTGTGGTGGCAAGTTCTGTCACTCAAATTCTGAGGGTGGGGAGCTTGGTATCTTATCCAATCAGAGCGCTGGACTGAGAACTGCCCAATCAGGCGCGCAGCCGGAGAGGAGGGGGCGGCATCCGGGATCTGGCGCGGCTTTTGCCTTTTGCGCCAGCGAGAGCTCGGTTAGGGTCTCCGCCGCCGTGCTTTCACCCCTCAGGGAGGCGTCGGTGATTCGGTCACAGCCTCAGCCTCCGTCGCTCTGTGACCTGCGGGTATTGGATGATTCGTAGCTGAGACTCCGCTACACCCCTGAAGTGGGGAAATGTCCccttgccctgtgcacctcctccgcgtggctgttcctgagtggcatcttttagaatacgctggtgtgggcgcgcacagcgcttcgctgagttctGAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTGACCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTGTTGCTATCTCTAACCCAGACCTGGCCATCTATCTGGAGCAAAGAAAGGAGCCCTACAAAGTGAAGATACATGAGACAGTAGCCAAACACCCAGCTGTGTGTTCTCATTTCACCCAAGACTTTTTGCCAGTGCAGGGGATAGAAGATTCGTTCCACAAACTTGTATTAAGAAGATATGAGAAATGTGGACATGAGAATTTACAATTAAGAAAAAGCTGTAAAAGGAAGGTGCAGAAAGGAGGTTATAATGAATTTAATCAATGCTTGTCAACTATCCAGAGCAAAATATTTCAGTGTAGTGCACATGTCAAAGTATTTAGTACATTTTCAAATTCAAACCAACGTAGGATAAGACATACTGGAGAGAAACACTTTAAAGAATGTGGCAAGTCATTTCAGAAGTTCTCAGACCTAACTCAACATCAAGGAATTCATGCTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGACTTTAAATGGTATTTAATCTTTAATGAATATAAGATAATTCATACTGGAGAGAAACCCTTCACATGTGAAGAATGTGGCAACATCTTTACCACATCCTCAAACTTTGCTAAACATAAAGTTCATACTGGAGAGAAATCTTACAAATATGAAGAATGTGGCAAAGCCTTTAATAGGTCCTCAACCCTTTCTAAGCATAAGAGAATTCATGCTGAAGAGAAACCCTTCACATGTGAAGAATGTGGCAAAATCATTACCTCATCCTCAAATGTTGCCAAACATAAGAAAATTCATACCGGAGAGAAACTCTACAAATGTCAGGAATGTGGCAAAGTCTTTAATAGGTCCACAACTCTTACTAAACATAACAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCCTTTAGTAGGTCCTCAGTTCTGAATGAACATAAGAGAATTCATACTGGAGAGAAGCCCTACAAATGTGAACAATGTGGCAAAGCCTTTAGACAATCCGCAACCCTTAATAAACATAAGAGTATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGAAAAGCCTTTAGTCGGTTCACAACCCTTAATGAACATAAGAGAATTCATACTGGAGAGAGGCCCCACAAATGTGAAGAGTGTGGCAAAGCCTTTGGATGGTCCACAGACCTGAATAAACATAAGATAATTCATACTGGAGAGAAACCTTACAAATGTGAAGAGTGTGGCAAAGCCTTTGGATGGTCCACATACCTGAGTAAACATAAGAAAATTCATACTGGAGAGAAACCTTATAGATGTGAAGAGTGTGGCAAAGCATTTAGACGTTCCAGAGTCCTGAATAAATATAAGACAATTCATACTGGAGATAAAACCCCCAAATGTAAAGGATGTGGCAAAGCCTTTAAGCGGTCCTCAAACCTGAATGAACATAAGAAAATTTATACTGGAAATAAACTATACAAATGTGAAGAATGTGGCAAAGCTTTTGGATGGTCCACAACCCTGAATGAAAATAAGAATCATACTGGAGAAAAACCCTACAAATGTAAAGAATGTGGGAAAGCCTTCAAACAGTCCGCATACCTGAATCAACATAAGAAAATTGATGCTGGAGAGCAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGATGGTCCACAGCCCTGAATGAACATAAGAAAATTCATATGGGAGACGAATCCTACAAATGTAAAGAATGTGGGAAAGCCTATAAACGGTCCTCAACCATAAATAAACGTAAGAGAATCCATACTGGTGAGAAACCCTATAAATGTTTAGAATGTCATAAAACCTTTAATAGCTCCAAAACCCTAATTGAACATAGGATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTTGCAAAGCCTTTAGACAGTCCGGAAACCTTTATGTACATAGGAGAATTCATACTGGAGATAAAACCATACAAGTGTAAAGGATGTGGAAAAGCCTTTAAGCTGTACTCCAGCATTCTTAAACATAAGAGAACTCGTACTGGAGGAATGTCTTACCAATATGAAGAATGTGGCAGTCTTTAAATGTTCCTCAATCTTTTCTAATCATAAGATAATTCATAATGGAGAGAAACTCCAGAAATGTGAAAAATATGAGAAAGCTTTTAACCACACCTCACTGTGTTCTAAACATAAGATAAATGATATTAGTGAGAAGCCATATGAAAAATGAAAATGTGGCAAAGACTTCAAAttctttttttttttttttttgagacagagtcttgctctctcccccagtctggagtgcagtggcacgatcttggctca

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