Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Retrocopy Name UHRF2P1
Plot displaying the genomic locations of a retrocopy (in chrX) and its respective parental gene (in chr12). Each line represents a retrocopy.
Species Chlorocebus sabaeus
Coordinates chrX:63686738-63690617  UCSC
Strand +
Parental Sequence XM_007969305.1
Parental seq. overlap 3139 bp
Parental seq. overlap (%) 85.3%
Genomic Region Intergenic
Retrocopy Summary UHRF2P1, located on chrX:63686738-63690617, is a retrocopy of the parental gene UHRF2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name UHRF2
Full Name N/A
Also known as -
Coordinate chr12:73010697-73106163
Strand -
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Human Homo sapiens UHRF2P1
Chimpanzee Pan troglodytes UHRF2P1
Bonobo Pan paniscus UHRF2P1
Gorilla Gorilla gorilla UHRF2P1
Orangutan Pongo abelii UHRF2P1
Gibbon Nomascus leucogenys UHRF2P1
Crab-eating macaque Macaca fascicularis UHRF2P1
Rhesus Macaca mulatta UHRF2P1
Baboon Papio anubis UHRF2P1
Golden snub-nosed monkey Rhinopithecus roxellana UHRF2P1
Marmoset Callithrix jacchus UHRF2P1
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>UHRF2P1
CGGTCCAGTGTGTGCGCTCACCCGCCTGCCGCGGAGGGCCGAAGCCACAGGCTAAGCGGCGTGGACAGGGCGGGGTGCAGCGCCTTGAGTGCAGGGGGAGACAAATGGGACCGGCTCCTCTCCCAGTGCCAAGATGTGGATCCAGGTTCGCATCATCGACGGCTCCGAGATGTGCACCTTTGAGAACATGTCTCACAAAGCGACGATTGAGGAGCAGCGCGAGCAGATGTGGGCGCTGTTCGACGTGCGGCCCGAGTGCCAGCACCTCTTCTACCAGGGTAAGCAGTTTGAAAATGGATATACCTTATTTGACTAGGATGTTGGACTGAATTATATAATTCAGCTGCTAGTTATCCAGACCCTAATCATCTTCCTGGAACATCTATGCAGATTGAGGTTAAACCCTGTTCTGATAGTCCACCTAAAGGCAAGAACGCTCCAAGGGTGGGACCTTCCAGTCAGCCATCTACAACAGCTCATGCCCATCTTATTGATCCTAGCTTCGAACTATATAAAGTAAATGAATTGGTGGATACCAGAGATGTCGGCCTTGGTGCTTGGTTTGAAGCACACATACATAGCATTACTAGAGCTTCTGATGGACAGTCACGTGGCAAAACTCCACTGAAGAATGGCAGTTCTTGTAAAAGGACTAATGGAAATATAAATCATAAATCAAAGAGAACATAAATAAACTGGACAATGTACTCTCTACATCTAATTCAGACTCTGTCGCTGCTGGTGAAGACGTTATTTGCCATATCCAGTATGATGAATACCCAGAAAGTGGTACTCTAGAAATGAATATCAAGGACCTTAGACTACGAGCTAGAACCATTTCGAAATGAAAGGAACTAAATGTTGGTGATGTGGTAATGGTTAATTATAACATAAAAAGTCCTAGACAAAGAGGATTCTGGTTTGATGCAGAAATTACCACACTGAAGGCAATCTCTAGGACCAAAAAAGAACTTCGTGTGAAAATTTTCCTAGGTGGGGATGGGAGGGTTCTGAAGGAATATTAAATGAGTGCAAGATAGTATCTGTAGATGAAATCTTCAAGATTGAGAAACCTGGAGCCCATCCTCTTTTGTTTGCAGATGTAAAGTTTTTAAGGAGAAATAACCCTGAATGTGACCTATGTTCTGGAGACCCAGATAAGAAATGCCATTCTTGCTTCTTTCTTGTATGTGTTGGGAAACATGAACCCAACATGCAGTTTCTATGTGATGAATGTAATGTGGCTTATCACATTTACTGCTTGAATACACCTTTGGATAAGGTCCCAGAAGAGGAATACTGGTATTGTTCTTCCTGTAACTGATTCCAGTTAAGTTGTAAAGGCTGGTGAAAGACTCAAGATGCACGAAAAGAAAGCAAAGATGCCATCCGCTAGTACTGAAAGCCAGAGAAACTGGTGCAGGAGAATGACTTGTGTTGGTCATATGAGAGAATGTACTATCGTCTCTTCTAATCCTTATGGACCTATTCCTGTTGGATCAACTTGGAGATTTAGAGTTCAAGTGAGTGACGTAGGTGTTCACAGACCCCATGTTTGTGGACTTCATGGTCGAAGTAATGATGGGGCTTATTCTCTTGTCTAGGCTGGTGGATTTGCAGATAAAGTCGACTGAGGTGATGAGTTCTTGTACACTGGAAGTGGTGGTAAAAAGCTTGTTGGTAATAAAAGAATTGGCACACCTTCAGATGATCAAACATTAACAAACACAAACAGGGCATTGGCCCTAAACTATGATGCTCCATTGGGTGATAGAATTGGAGCAGAGTCTTGGAATTTGAGAGCTGGCAAGCCAGTCAGAGTGATATGCAGTTTTAAAGGGAGGAAGATCAGCAAATAAACTCCCGAAGAAGGCAACAGATATGATGGCATTTATAAGGTAGTGAAATACTGGCCAGAGATTTCATCAAGTGATGAATTCTTGATTTGGCACTATCTTTTAAGAAGAGATGATGTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAATGGTTAAGGAGATTATGTCTACATTTACAGTATCCAGCAGGTTACCCTTCAGATAAAGAAAGGAAGAAGACTAAAGGAGAGTCAAAGAAGCAGGCCAGTGGAACCACAAAAAGGCTGATTTCAGATGTCTAAGTGCCTCCAAAGTATACAAAGCATCAGATTCAGCAGAAGCAATTGAGACTTTTCAACTAACTCCTCAATAGCAACATCTCATCAGAGAAGACTGTCAAAGCCAGAAGCTGTGGGATGAAATGCTTGCATATCTTGTGGAAGGACCAAATTTTCTGAAAAAATTGGAACGTTTTTTATGTGTGTTTGCTGCCAGAAGCTAGTTTACCAGCCTGTGATGATGGAGTGCTTCCACAATGTCTGTAAAGATTGCCTACAGCGCTCCTTTAAGGCACAGGTTTTCTCCTGCCCTGCTTACTGGAATGATCTTGGCCAGAATTACATCATAATTCCCCATGAGATTCTGCAGACTCTACTAGACCTTTTCTTCCCTGGCTACAGCAAAGGATGATGATCTGTCTGCTTTCACTGTGTTGTTCATGGTGGGTTTTTGCACAATAAAGAATCTAAAATGGGTGGGGAGGGTGGAATAGTGGACAGTATCTCTCATGTTCTGAAGCAGCTATTTCTCTTTCCCACAGCCATCATCTTGTGTGTGTAGTAAGAGGCCCATTTCTCAACTGTCTTTTAAATATCTAAAGGTAGTTCCTGTAACAACTAGTTTTTTcTCAACAACTAGTTTTAATGAATAAAAAGTCAAAGCCCCAGCTCTAGATGATATCCAAGTTACGATTTATTTTGCAACTACCTCAGGACAGAAAAGATTCATGGGGATTTAAAAAATCATTGAATAACCAGTTAAATGAAATTTTAGCAACACACTGCCTCCCAAATATTAATTGTGCCTGGTTCTTGTAATTTTATTTTACAGAAAAGTAAATGACACTTGAGATCCTTGCAATGAGCACAGCTTCTATAGtgtgcatatacttgtgcatatacttTTTTAGTGTGCGTATACTTTTTTTAACGTCTCTTGTTCCATTACAATGTGTGTTTTGCAAGGACAGGTTAATTTTTTCAGGCCACTTTGTGAACTCCATTGTGCTTTTATCTGATGTTTTATGCAAGTTGACTACTAATGACTAATGAGAACAATAATGAATGCATTGTTGCTGTATTAACGTAATGTGGTGTGTTTTTGCACTTGAAAGGTATTCATATGCTCTAGTTGTAAATGTTCATGAAAATCCACTTCTGTACTAGTCGAATTGCTTTTAGTGTCTCCACAGTGGTTTTACATCTGCAGAGTTTTGAGAGCTGTGTTGACCTTTGAGAGGATTTGAAATTGCTTCATATTGTGATCCTGAATTTTATATTTACTATATTCCCTAAAGTATGCCTTAGTAAATATTTTATTATCAGGAAAA
>XM_007969305.1
ATCCGGCTTGGCGCCGTGACCTCCATGTGGGAGCTCCAGCTCTATAAGTAAACACTCTGCGCGGCGCAGACATGGCCTCTTCCTCTTTTTGAGGCGGTGTCTGCGGCAGCGCCTCGGAGTGGTTCCGGTCGTCTCTTCTCAAGTCGGCTGGTCGGTCGCGCGGGCTGAGAGTCGCCGCCGCCTGTCGGGCCCGGCGTCCGGTAGGTCCAGTGCGCGCGCTCGCCCGCCTGCCGCGGAGGGCCCGAGCCGCAGGGGAAgcggcgcgggccgggcggggcgcggcgCCCCGAGCGCAGGGGGAGACAAAGGGGACCGGCTCCTCTCTAGGCGCCAAGATGTGGATCCAGGTTCGCACCATTGATGGCTCCAAGACGTGCACCATTGAGGACGTGTCTCGCAAAGCCACGATTGAGGAGCTGCGCGAGCGGGTGTGGGCGCTGTTCGACGTGCGGCCAGAATGCCAGCGCCTCTTTTACCGGGGCAAACAGTTGGAAAATGGATATACCTTATTTGACTATGATGTTGGACTGAATGATATAATTCAGCTGCTAGTTCGCCCAGACCCTGATCATCTTCCTGGCACATCTACACAGATTGAGGCTAAACCCTGTTCTAATAGTCCACCTAAAGTAAAGAAAGCTCCGAGGGTAGGACCTTCCAGTCAGCCATCTACATCAGCTCGTGCCCGTCTTATTGATCCTGGCTTTGGAATATATAAGGTAAATGAATTGGTGGATGCCAGAGATGTCGGCCTTGGTGCTTGGTTTGAAGCACACATACATAGTGTTACTAGAGCTTCTGATGGACAGTCACGTGGCAAAACTCCACTGAAGAATGGCAGTTCTTGTAAAAGGACTAATGGAAATATAAAGCATAAATCCAAAGAGAACACAAATAAATTGGACAGTGTACCCTCTACGTCTAATTCAGACTCTGTTGCTGCTGATGAAGACGTTATTTACCATATCCAGTATGATGAATACCCAGAAAGCGGTACTCTAGAAATGAATGTCAAAGATCTTAGACCACGAGCTAGAACCATTTTGAAATGGAATGAACTAAATGTTGGTGATGTGGTAATGGTTAATTATAATGTAGAAAGTCCTGGACAAAGAGGATTCTGGTTTGATGCAGAAATTACCACATTGAAGACAATCTCAAGGACCAAAAAAGAACTTCGTGTGAAAATTTTCCTGGGGGGTTCTGAAGGAACGTTAAATGATTGCAAGATAATATCTGTAGATGAAATCTTCAAGATTGAGAAACCTGGAGCCCATCCTCTTTCGTTTGCAGATGGAAAGTTTTTAAGGCGAAATGACCCTGAATGTGACCTGTGTGGTGGAGACCCAGATAAGAAATGCCATTCTTGCTCCTGTCGTGTATGTGGTGGGAAACATGAACCCAACATGCAGCTTCTGTGTGATGAATGTAATGTGGCTTATCATATTTACTGTCTGAATCCACCTTTGGATAAAGTCCCAGAAGAGGAATACTGGTATTGTCCTTCCTGTAAAACTGATTCCAGTGAAGTTGTAAAGGCTGGTGAAAGACTCAAGATGAGTAAAAAGAAAGCAAAGATGCCATCAGCTAGTACTGAAAGCCGGAGAGACTGGGGCAGGGGAATGGCTTGTGTTGGTCGTACGAGAGAATGTACTATTGTCCCTTCTAATCATTATGGACCTATTCCTGGTATTCCTGTTGGATCAACTTGGAGATTTAGAGTTCAGGTGAGCGAAGCAGGTGTTCACAGACCCCATGTTGGTGGAATTCATGGTCGAAGTAATGATGGGGCTTATTCTCTTGTCCTGGCTGGTGGATTTGCAGATGAAGTCGACCGAGGTGATGAGTTCACATACACTGGAAGCGGTGGTAAAAATCTTGCTGGTAATAAAAGAATTGGCGCACCTTCAGCTGATCAAACATTAACAAACATGAACAGGGCATTGGCCCTAAACTGTGATGCTCCATTGGATGATAAAATTGGAGCAGAGTCTCGGAATTGGAGAGCTGGTAAGCCAGTCAGAGTGATACGCAGTTTTAAAGGGAGGAAGATCAGCAAATATGCTCCTGAAGAAGGCAACAGATATGATGGCATTTATAAGGTGGTGAAATACTGGCCGGAGATTTCATCAAGCCATGGATTCTTGGTTTGGCGCTATCTTTTAAGAAGAGATGATGTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTCAAGGAGATTATGTCTACGTTTACAGTATCCAGCAGGTTACCCTTCAGATAAAGAAGGGAAGAAGACTAAAGGACAGTCAAAGAAGCAGCCCAGTGGAACCACAAAGAGGCCAATTTCAGATGATGACCGTCCAAGCGCCTCCAAAGTATACAAAGCATCAGATTCAGCAGAAGCAATTGAGGCTTTTCAGCTAACTCCTCAGCAGCAACATCTCATCAGAGAAGACTGTCAAAACCAGAAACTGTGGGATGAAGTGCTTGCACATCTTGTGGAAGGACCAAATTTTCTGAAAAAATTGGAACAATCTTTTATGTGTGTTTGCTGCCAGGAGCTAGTTTACCAGCCTGTGACAACTGAGTGCTTCCACAATGTCTGTAAAGATTGCCTACAGCGCTCCTTTAAGGCACAGGTTTTCTCCTGCCCTGCTTGCCGGCATGATCTTGGCCAGAATTACATCATGATTCCCAATGAGATTCTGCAGACTCTACTTGACCTTTTCTTCCCTGGCTACAGCAAAGGACGATGATCTGTCTACTTTCACTGTGTTGTTCATGGTGGCTTTTTGGACAATAAAGAATCTAAAATGGGCGGGGAGGGTGGAAGAAATGGTGGACTGTATCTCTCACGTTCTGAAGCAGCTAATCCTCTTTCCCACATAGCCATCATCTTGTGTGTGTAGTAAGAGGCCCATTTCTCAACTGTCTTTTAAATATCTAAAGGTAGTTCCTGTAACAACTAGTTTTAATGAGTAAAAAGTCAAAGCCTCAGCTCTAGTTGATATCCAAGTTACGATTTATTTTGCAACTACCTCAGGACAGAAAAGATTCATGGGGATTTTAAAAATCATTGAATAACCAGTTAAATGAAATTTTAGCAACACACTGCCTCCCAAATATTAATTGTGCCTGGTTCTTGTAATTTGATTTTACAGAAAAGGAAATGACACTTGAGATCCTTGGAATGAACACAGCTTCTATAGTGTGCATATACTTTTTTAATGTCTCTTCTTCCACAATGTGTGTTTTGCAAGGACAGGTTCATTTTTTTAGCCCACTTTGTGAACTCCATTGTGCTTTTTTCTGGTGTTTTATGCAAGTTGACTACTAATGACTAATGAGAACAATAATGAATGCATTGTTGCTGCATTAGTGTAATGTGGTGTGGTTTTGCACTTAAAAGAGGTATTCATGCTCTAGTTGTAAATGTTCATGAAAATCCACTTCTGTACTAGTCGAACTGCTTTTAGTGTCTCACCAGTGGTTTTACATCTGCAGAGTTTTGAGGGCTGTGCTGACCTTTGAGAGGATTTGAAATTGCTTCATATTGTGATCCTAAATTTTATATTCACTATATTCCCTAAAGTATACCTTAATAAATATTTTATGATCAGAAAAACA

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