Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Retrocopy Name TLK1P2
Plot displaying the genomic locations of a retrocopy (in chr15) and its respective parental gene (in chr12). Each line represents a retrocopy.
Species Macaca mulatta
Coordinates chr15:18031217-18035366  UCSC
Strand -
Parental Sequence XM_028830834.1
Parental seq. overlap 3723 bp
Parental seq. overlap (%) 63.6%
Genomic Region Intergenic
Retrocopy Summary TLK1P2, located on chr15:18031217-18035366, is a retrocopy of the parental gene TLK1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name TLK1
Full Name tousled like kinase 1
Also known as -
Coordinate chr12:58131221-58298506
Strand -
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Human Homo sapiens TLK1P1
Chimpanzee Pan troglodytes TLK1P1
Bonobo Pan paniscus TLK1P1
Gorilla Gorilla gorilla TLK1P1
Orangutan Pongo abelii TLK1P1
Gibbon Nomascus leucogenys TLK1P1
Green monkey Chlorocebus sabaeus TLK1P1
Crab-eating macaque Macaca fascicularis TLK1P2
Golden snub-nosed monkey Rhinopithecus roxellana TLK1P2
Baboon Papio anubis Without Homology
Marmoset Callithrix jacchus Without Homology
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>TLK1P2
GCTCCTTCCCTCAGCCTCTTCTCTGGTGCACCCACCCACTCCCTCACTTCTCCCCCTTTCCCTCTTCCCCATCTGCTCTCCTTCCCTCACCTCTTTCCTCCCCACTTCCCCTCTTCTTGGTTTCCTCCCCCATCCCCTTGACTCTCCCCTCCCTGCCCTTACTCTCTCGCTCACCCTCAGCCTGGACCCCCCATGATGGAGGCAGGTGCCAGTGCCATTGTCACTGCTGCCATCGCAGAGTGGGAGTCATGTTCCCAGAACGTAGCATGATGGGTGTCCAAAGTAGCAGTGGAAGTTTGCAGGAGCCACCATCTTGGTACCAGCGCTCCACATCTCCAACCCCAGGCTCAGTGGCAAGCAGCGGCCAGGTCCCTGATAAATCACGCACTACCATCCAGGAGGCCCAGGGAAGATGCAATGGATGAGCTTCATAGTCTGAATCCAAGAAGGCAAGAGTTATTGGAAGCTAGATTTACTGGGTTGTAAGTGAGAACACAGGGAGTACCAGCAATTGCAGTGTTGGAGCTAAAGCCTCAACAAATAATGAAAGCTCTTATCACAGTTTTAGAAGCTTAGGATCTTTAAGTGACAAAGAATCAGAGAAATGACTGGCAGGCAGCTGAAAGGACTGTGCAAGTGACCGGACTTTATCTGCAGTGGGTTCCCTTGAGAAACCAGAGAAGAAACAATCAGAATCATCTAGGAGAAAATATAGAAAAGCAGAAACCCAGAATGAAAATTGTCAGGGAAAAAGTACTGGGGGGATGTGGCCACAAAATTAGTGACTATTTTTAATACCAGGGTGAAAATGGCTCAAGTCCAGTAAGAGGCATACCTTCTGCAATCAGTTCTCCTCAAAATTCATATTCACATTCCACTCCTTCCTCATCTCTTTGACCAAATGGCCCTTCTCCTACTGCATTAGCATTTGGGGACCACCCTATTGTACAATCAAAGCAGTTACCCTTTAAAATTATTCAGACTGTTCTAACGATCCTGAAATTAGCAGCATTAGAAAGTAATAAAATCCAGGAGCTGGAAAAGAAGGAAGGATATATAGATTATTTGCTCAGGGCTAACCATGATCTCAGATGGCAAATAGATGAACAACAAAAATTACTTGAAAAATACAAAGAATGATTAAATAAGTGTATATAAATGAGCAAGAAACTTCTTTTGAAAAGAGTACACAAGAAAAACTGTCAAACAGAGAGAAGAGTATGCAAGATTGATTACATCTCAGGCACTTTACAACAGTTAGACATGGCGTTTCATTTACTGAATAATGGACAGACGGTTTTGCATTTCAGAATCTTGTGAAGCAACAAGAATGGGTGAATTAGCAAAGGGAAGATATTGAAAGGCAAAGGAAAATTTTAGCCAAACACAAACCTCCCACAGCTAATAATTCTCAGACACCCTCTACCACTACTGAACCAAAACAAAGGAAAAACAAAGCAGTCAGTGCAGCAGAAAATGATCCCTTTGTTAGACCAAATTTACTACAACTGTTGACTTTGGCAGAATATCATGAACAGGAAGACATTTTCAAACTTAGACTAGGACATCTCAGAAAGGAAGAGGCAGAAATCCAAGCAGAACTTGAATGTTGACATGACATGAGCTGAGCAGAATAAACAATGAAGATAATTCACAATTCAAAGATCACCCAATGTTAAACGAAAGATATTTATTACTTCATCTGCTTGGTAGAGGTGGCTTTAGCAAAGTGTATAAGGCTTTTGACCTTTATGAACAAAGATATACTGCTGTGAAGCTACATCAGCTTAATAAAGGCTGGAGAGATGAGAAAAAAGAAAACTACTACAAGTATGCCTGCAGTATAGAATACACAAAGAACTGAATCACCCCAGAATAGTTAAACTCTATGATTATTTCTCCTTGGATACAGATACACTTTGTACGGTGTTAGAATACTGTGAAGGCAATGACTTGGATTTCTATCTGAAGCAACAAAAGCTAATGTCAGAGAAAGAAGCTGAGTCTATTGTAATGCAGATTGTAAATGCACTAAGATATCCCAATAAGATCAATCCCCCATTACACATTATGACCTTAAGCCAGGAAACATCCTTTTGGTAGATAGAACAGCATGTGGTGAAATCAAAATCACTGATTTTTGTCTGTCCAAGATTACAGATGATGATAGCTATGGTATAGATGGAACTAATCTACCTCCTGAGTGTAACATAGTTGGAAAAGTGGCACCAAAGATTTCCAACAAGGTTAATGTGTGGTCAATTAGAGTCATCTTCTTTCAGCATCTTTGTGGTAGAAAGCCATTTGGTCACAATCAATCTCAACAAGACATTCTTCAAGAAAATACAATATTAAAAGCCACAGAAGTCCAGTTCCATGTAAAACCAATTGCAAGCAGTGAACCCTAGGCCTTTATAAGACACTGCTTAGCATATGGAAAAGAAGATTGATTTGATGTGCACCAGCTGGCAAATGACCCATACCTCCCCCCACAAAAGTACATCAAATTCTTCAGGAAACCTACAACATGGCTGGGCTGACAGCATCTCCTACACTGCTTTCTTCAAGCATAATTACTTACTGACTTTCCTCCAAGACCGGCATGATGTCTTTGGATTGCTTCCAGATGCACACTTAAGTTTGAGAGCATTTGAGTGtACACAGGACATGGTAAAGAACTGCTTGTGAACTGAAGTTCCTCATAGTGTCATTTCTTTGAGAGTGGATCATGGACAATGAATAAATGCACACTTCTGACTATAACTTTGAGCAGTGAAGGATGACCACGTGTTATAAAGAAACAGGAATACCATGTTAAGACAGAAGAAAAACATTTTTGTTCTTTTATTTGAAGGAACACCGTAAATAATGTTTATAATACTTAAATACATTTGGTTGTTACCAGAGTTCTAATATGAAAGGTAGTTTTTCATATTAGTTTTTCATTTCTAACACATGAACTACAGTGCCTGGATACATTCTTCAGCATTTGGCAGTTAATCTGCTGAAGTCAAAGTAAGAACTGAATGAGAGTGACAGTTGGGTTTTATAGTAATAGAATGTAAGAGTTCTCTTTGGACAAAGTTAGGCTTTGTCATTTGCCTATTCTGACTTTTACCAAGTTGTACCTCGAAATCACATGTCCATTTTCTTTCACTTGTTATATTAAAGGGAGAGCTATTATTTCTAAATTCTTTACGCCTTTGACAAAATGAGCTACTTGTTTTGAAATCAGTTGAATTCACTAAATTGTAATATTGCCAGTGTTTTCAACACATTAGAATTGATAACAGGTACGTTTCTTTTGTTACCAGGCCTTGTTCATCAAAACAGGTGACAGTATGTAACCAAATGCAGACCAGTTCTATGAAGGATAATGATAAAATCCCTTCTAGCTCTATTGTAAATTGCTGTACAGATTTCAATTACTAAGTTTCAGCAGCTTATTCTTGTACAAATGTTTAAAATATGGCTTTTCTAATTGGGTATTGTATTTTTTAAGTCTTCTTGAAGGTGCTCTTATTACTGCTAAATGATGTCACTTCTTTGCTAAAAAAGTAAATGACCCCCTAGAAGGTGCAGGTTGTCTGTCATTAGCAGACATTCATTAACAATCACGACAGGTAAAAATGATCCATGTTGGACATATTGAGTTCTTTAAATCAGTTAGTGGGTTCTAGGGCTGTGGAGCACATAGATACTAGATTTATACATTGTTCATGGTTATTCTACATTTCTAGAAAGTTCTTATCAGCAAGATGATCCCGTAAATAAGTTTCTTGTGGTTTCTTCAAATTTGTTAAAATGTGAACATTTTCTAACTGCCTTGTAGGGTAGAAACCAATATTTTTCAGGATGCTGTATTTCACTCCTGGAAGGACTTTTTCTTTATTGTCACATTAATAATGCTGATACTTAATGTAAGTTGTTCATGTTGCAGAAAAAGGAGGTTATACTTACCATGGATTCTCTTTAATGTTGTACAGTTAAACTGTATTTCTGATGTTGCAAGCCATTTTGTTTTTTCATTGTACATAGACACATTGTCTCTTTAAAATGCTGCTGAAATTTTACAGAATATAGCCAAAACAATAATAAACAATGACAGCTAAAATGTAAAA
>XM_028830834.1
CAGGAGCCTCGCGATAGTGTTTGCACAGGCGGCGCGTGACGCCGCCGCCGCCTGTAACTGATGCAGAGGTTACCCCGCCGCCTCAGCCGCCACCCACCGCCCGCCGCCGCCGCCTCCCGGGCGACGCCGGGGGCCGACGCACTGCAGAGGTGCCGGCAGGTTCCGCCCGCGGAAGTCTCCTCGGCCGGCGCAGCCCGCGCTCCGCCCGCGCTCCGACCCCGGCCCCAGGGCACCCCCTCGACGCCTCCGCTGCCGCGCTCCTTCCCTCCGCCTCTTCTCCGGCGCGCCCGCCCGCTCCctcgcttctccccctttccctcctccctgtcccctctccttccctcacctctttcctcccCACCGCCCCTCTTCTCGGTTTCCTCCCCCATCCCCTTGACTCTCCCCTCCCAGCCCTCGCTCTTTAGCTCGCCCTTAGCGCGGCCCCCGCCATGACGGAGGCGGGTGCCGGTGCCGTTGCCGCCGCTGCCGTCGCAGGGGGGGAGTCGGGTTCCCAGAAAGTAGCTTGATGAGTGTCCAAAGTAGCAGTGGAAGTTTGGAGGGGCCGCCATCTTGGTCCCAGCTCTCCACGTCTCCAACCCCGGGCTCGGCGGCGGCGGCCAGGTCCCTGCTGAATCACACGCCGCCATCCGGGAGGCCCAGGGAAGGTGCAATGGATGAGCTTCATAGTCTGGATCCAAGAAGGCAAGAGTTATTGGAAGCTAGATTTACTGGAGTTGCAAGTGGGAGCACTGGGAGTACGGGCAGTTGCAGTGTTGGAGCTAAAGCCTCAACAAATAACGAAAGCTCTAATCACAGTTTTGGAAGCTTGGGATCTTTAAGTGACAAAGAATCAGAGACACCAGAGAAGAAACAATCGGAATCATCCAGGGGAAGAAAGAGAAAAGCAGAAAACCAGAATGAAAGTAGTCAGGGAAAAAGTATTGGGGGACGTGGCCACAAAATTAGCGACTATTTTGAATACCAAGGTGGAAATGGCTCAAGTCCAGTAAGAGGCATACCTCCTGCAATCCGTTCTCCTCAAAATTCACATTCACATTCCACTCCTTCCTCATCTGTTCGACCGAATAGCCCTTCTCCTACTGCATTAGCATTTGGGGACCACCCTATTATACAACCAAAGCAGTTATCCTTTAAAATTATTCAGACTGATCTCACAATGCTGAAATTAGCAGCATTAGAAAGTAATAAAATCCAGGACCTGGAAAAGAAGGAGGGACGTATAGATGATTTGCTCAGGGCTAACTGTGATCTCAGACGGCAAATAGATGAACAACAAAAATTACTTGAAAAATACAAAGAACGATTAAATAAGTGCATATCAATGAGCAAGAAACTTCTTATTGAAAAGAGTACACAAGAAAAATTGTCAAGCAGAGAGAAGAGTATGCAAGATCGATTACGCCTCGGGCACTTTACAACAGTTAGACATGGCGCTTCATTTACTGAACAATGGACAGATGGCTTTGCATTTCAGAATCTTGTGAAGCAACAAGAATGGGTGAATCAGCAAAGGGAAGATATTGAAAGGCAAAGGAAACTTCTAGCCAAACGCAAACCTCCCACAGCTAATAATTCTCAGGCACCCTCTACCAATTCTGAACCAAAACAAAGGAAAAACAAAGCAGTCAATGGAGCAGAGAATGATCCCTTTGTTAGACCAAATTTACCACAACTGTTGACTTTGGCAGAATATCATGAACAGGAAGAAATTTTCAAACTTAGACTAGGACATCTCAAAAAGGAAGAGGCAGAAATCCAGGCAGAACTTGAACGTTTGGAAAGAGTCAGAAATCTTCACATACGTGAGCTGAAAAGAATAAACAATGAAGATAATTCACAGTTCAAAGATCACCCAACATTAAATGAAAGATATTTATTACTTCATCTACTTGGTAGAGGTGGCTTTAGTGAAGTATATAAGGCTTTTGACCTATATGAACAAAGATATGCTGCTGTGAAGATACATCAGCTTAATAAAAGCTGGAGAGATGAGAAGAAAGAAAACTACCACAAACATGCCTGCAGAGAGTATAGAATACATAAAGAACTGGATCACCCCAGAATAGTTAAACTCTATGATTATTTCTCCTTGGATACAGATACGTTTTGTACAGTGTTAGAATACTGTGAAGGCAATGACTTGGATTTCTATCTGAAGCAACACAAGTTAATGTCAGAGAAAGAAGCTAGGTCTATTGTAATGCAGATTGTAAATGCACTAAGATATCTCAATGAGATCAAACCCCCTATTATACATTATGATCTTAAGCCAGGAAACATCCTACTGGTAGATGGAACAGCATGTGGTGAAATCAAAATCACTGATTTTGGTCTGTCCAAGATTATGGATGATGATAGCTATGGTGTAGATGGAATGGATCTAACTTCTCAGGGGGCAGGCACTTACTGGTATTTACCTCCTGAGTGTTTTGTAGTTGGAAAAGAGCCACCAAAGATTTCCAACAAGGTTGATGTATGGTCAGTTGGAGTCATCTTCTTTCAGTGTCTTTATGGTAGAAAGCCATTTGGTCACAATCAGTCTCAACAAGACATTCTTCAAGAAAATACAATATTAAAAGCCACAGAAGTCCAGTTCCCTGTAAAACCTGTTGTAAGCAGTGAAGCCAAGGCCTTTATAAGACGCTGTTTGGCATATCGAAAAGAAGATCGATTTGATGTGCACCAGCTGGCAAATGACCCATACCTTCTCCCACACATGAGAAGATCAAATTCTTCAGGAAACCTACACATGGCTGGGCTGACAGCATCCCCTACGCCCCCTTCTTCAAGCATAATTACTTACTGACTTTCCTCCAAGATTGGCATGATATCTTTGAATTGCTTCCAGATGCACACTTGAGTTTGAGAGCATTTGAGTGGttttttttttgtttttttgttttttttttttACACAAGACATGGTTAAGAACTGTTTGTGAACTGAAGTTCCTCATAGTATCATTTGTATGAGAGTGGATCATGGACAGTGAATAAATGCACACTTCTGACTATAATTTTGAGCAGTGAACGATGACTGCCTGTTACAAAGAAACAGGAATACCATGTTAAGATAGAAGAAAAAACTTTTGTTTATTTGGGGGAACACTGTAAATAACGTTTATAATACTTAAATACATTTGGTTGTTACTAGAGAGTTCTAATATGAAGGGTAGTTTTTCATTATTTAAAAACACATGGAAAAATAAGAGACATATTTCTAACATACGAACTATAGTGCCTGGATACATTCTTCAGCATTTGGCAGTTAATCTGCTGAAACCAAAGTAAGAACTGAATGACAGTGACAGTTGTGTTTTGTAGTAATAGAATGTGAGAGTTAGAATCTTTGGACAAAGTTAGGCTTTGTCATTTGCCTATTCTGGCTTTTACCAAGTTGTACCTCGAGATCACATGTCCGTTTTCTTTCACTGGTTATATTAAAGGGAGAGCTATTATTTCTAAATACTTTACACTTTTGACAAAATGAGCTGCTTGTTTTGAAATCAGTTGAATTCACTAAATTATAATATTGCCAGTGTTTTCAACATGTTAGAATTGATAACAGGTATTTTTCTTTTGTTACCAGGCCTTGTTCATCAAAACAGGTGACAGTATGTAACCAAATGCAGACCAGTTCTATGCAGGATAATGATAAATTCCCTTCTAGCTCTATTGTAAATTGTTGTACAGATGTCATATTTCAATTACTAAGTTTCAGCAGCTTATTCTTGTACAAATGTTTAAAATATGGCTTTTCTAATTGGATATTGTATTTTTTTTAAGTCTTCTTGAAGGCGCTCTAATTGCTGCTAAATGTTGTTGCTTCTTTGCTAAAAAAATTAAATGACCTAGAAGGTGCAAGTTGACTGTACATCATAGAGAGATATTAAAAAGCATACAGTCATTAATCAAGACGTAAAAGTGATCCATGTTGGACATAATTGAGTTTTTTAAATCAGTTTATTGGGTTCTAGGGCTGTGGAGCACATAGATACTAGATTTATAATTTGTTCATGGTTATTCTGCATTTCTAGAAAGTTCTTATCAGCAAGATGGTCCCATAAACAAATTTCTTGTGGTTTGTACAGATTTGTTAAAATGTGAACATTTTCTAACTGCCTTGTAGGGTAGAAACCATATTTTTCAGGATGCTGTATTTCACTCCTGTAAGGACTTTTTCTTTATTGTCACATTCATAATGCTGATACTTACATGTAAGTTGTTCATGTTGCAGAAAAAGGAGGTTATACTTACCACGGATTCTCTTTAATATTGTACAGTTAAACTGTATTTCTGATGTTGCAAGCCATTTTGTTTTTTCATTGTACATAGACACATTGTCTCTTTAAAATGCTGCTGAAATTGTAGAGAATATAGCCAAAACAGTaataaacaatgacagttaaaatgtaaagactatgaaaatgacattggaaGGGAGCTTTCAAGATGGTAGGATATTGACTGACTGAGCTCCTTAAAAATCAGCTGAATAAATTCCTTAAGTATACTTCAAGACAAGTGTAAATTGTTTCAAGCTGTTAAAGTTAAACCTAATAACCATTATCAAGGCAACTCCTGGGTAAGTAACACTTAGAACTATCAAGAGTGGTTTAAGGGGCCGGCTATACCCATTCCTCTGTAGAGCAGATAGAAATCCTATTTAAAAAAATACTACGCGGTAATGAAATCTTAGCATTGATTGAGTGCTTTAGGTGCTGCCTGCAAGTTTTCAGTTTTGTTGTTGGAGTTTTCATCTTTATGAATTATAAAGTCCTGTGTTCATAAAGTAACATTTAAATTCCTGAACTAAAAGAAAATGCCCAGTTTGCTTAAAATTTTGGGGAGATACGAAGTTAATGTGTAAATCTAACTTTGAGGTTCAGTCAGTTTAATAGTATAGACCTAGAGATCACTGCTTTACCATTTTACTTTCAAATGAGTGAGAGCGACTGCTAGTGTCAGAACGCAGGAAAGGGGAAGAACAAGCCATGAAATGAAGTTGCTTTCTTGACCTGGGTTTAGGTCATCATTTTTAAATCAAAGATGTATAGGAGATGAATCAACTTACAGACCCATGTTTTCCTTCTAAAAGTTTCCCAAAGAAATGTTATAGAGTTTGAATAACATGCCAGTGATCCAGCAGGTCCAAGATGGCTAATTGAGCCACATTGAATAACTTACTTTTACCCTCACGTGGAAAGTTGGTATCTATTGCTAAATGATTTCAAGGTCACTCTGACAGTCTTTGACACTACTGTTTTTTTAGGCTTTGATTGTTTTCTAGTCTCCTGGTGTCTGTCCTCAGAATTAAAGCGTGTCCTACATCCCTAAGATAAGAGCCAAGGCCTCTTTTAAGAGTCAGCACTGATACAGCGTAAAATCTACGGTTTTGCATATGATTTAAAAAAATCTTTCTTTGATTTGAATTTGCTTTAGTGTGTACATGTTGAGAGGAAGTAACTGTAGAAACCACCCTAATTTGTAAGTGGGGAGTTGGAGATACTTGGTAGTTTTTCAAAAATACTCAATCTTTTTTTCCCCTTTTCTTTTTAACACTCACTGCCACCTCCTTCTAAAACAACTCTGTCAGTTTAAATGGCATATAAAATGTGAACAAACACCTCATTACATGAAGTCAAAATGGTGTAGAGCTTCAGTGAAACATATGAAGAGTATAATGTGTTGTTTTGCTGTTCATCATTACTTATTAAATGCAGTAATGTTGATTGC

Publications

PMID - Link Title