Retrocopy Name | WtapP3 |
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Species | Mus musculus | |
Coordinates | chr10:47200081-47201947 UCSC | |
Strand | - | |
Parental Sequence | NM_175394.2 | |
Parental seq. overlap | 1517 bp | |
Parental seq. overlap (%) | 30.4% | |
Genomic Region |
Intergenic |
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Retrocopy Summary | WtapP3, located on chr10:47200081-47201947, is a retrocopy of the parental gene Wtap. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | Wtap |
Full Name | WT1 associating protein |
Also known as | 2810408K05Rik|9430038B09Rik |
Coordinate | chr17:13185686-13211430 |
Strand | - |
Gene summary | Predicted to enable identical protein binding activity. Predicted to be involved in mRNA methylation and regulation of alternative mRNA splicing, via spliceosome. Predicted to act upstream of or within RNA splicing and mRNA processing. Located in cytoplasm and nucleoplasm. Part of RNA N6-methyladenosine methyltransferase complex. Is expressed in several structures, including early conceptus; embryo mesoderm; genitourinary system; hemolymphoid system gland; and liver. Orthologous to human WTAP (WT1 associated protein). [provided by Alliance of Genome Resources, Apr 2022] |
Species | Scientific Name | Retrocopy | |
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Human | Homo sapiens | Without Homology |
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Chimpanzee | Pan troglodytes | Without Homology |
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Bonobo | Pan paniscus | Without Homology |
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Gorilla | Gorilla gorilla | Without Homology |
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Orangutan | Pongo abelii | Without Homology |
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Gibbon | Nomascus leucogenys | Without Homology |
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Green monkey | Chlorocebus sabaeus | Without Homology |
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Crab-eating macaque | Macaca fascicularis | Without Homology |
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Rhesus | Macaca mulatta | Without Homology |
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Baboon | Papio anubis | Without Homology |
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Golden snub-nosed monkey | Rhinopithecus roxellana | Without Homology |
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Marmoset | Callithrix jacchus | Without Homology |
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Mouse lemur | Microcebus murinus | Without Homology |
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Rat | Rattus norvegicus | Without Homology |
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Chinese hamster | Cricetulus griseus | Without Homology |
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Rabbit | Oryctolagus cuniculus | Without Homology |
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Pig | Sus scrofa | Without Homology |
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Cow | Bos taurus | Without Homology |
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Sheep | Ovis aries | Without Homology |
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Dolphin | Tursiops truncatus | Without Homology |
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Horse | Equus caballus | Without Homology |
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Dog | Canis familiaris | Without Homology |
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Panda | Ailuropoda melanoleuca | Without Homology |
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Cat | Felis catus | Without Homology |
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Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
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Velvety free-tailed bat | Molossus molossus | Without Homology |
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Greater mouse-eared bat | Myotis myotis | Without Homology |
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Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
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Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
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Egyptian rousette | Rousettus aegyptiacus | Without Homology |
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Sloth | Choloepus didactylus | Without Homology |
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Tasmanian Devil | Sarcophilus harrisii | Without Homology |
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Opossum | Monodelphis domestica | Without Homology |
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Platypus | Ornithorhynchus anatinus | Without Homology |
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Chicken | Gallus gallus | Without Homology |
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Turkey | Meleagris gallopavo | Without Homology |
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Zebra Finch | Taeniopygia guttata | Without Homology |
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Budgerigar | Melopsittacus undulatus | Without Homology |
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Painted Turtle | Chrysemys picta | Without Homology |
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Lizard | Anolis Carolinensis | Without Homology |
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Frog | Xenopus tropicalis | Without Homology |
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Zebrafish | Danio rerio | Without Homology |
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Drosophila | Drosophila melanogaster | Without Homology |
>WtapP3 |
gaGCCCTGATGGGGCAGGTGCGGGCTTCTGCAGACTGTCTCAGTGCAGCGGCTGTGGTATGCCACTGTCTCTCCGAGTCCTGAGGTCCCCAGTGGGACAGGCCAGCCTGCCCTTGCCTTTTCTCTCTAGAGGTGCCCAGCATGGTGACCGAGGAGGTACCGGAAGTCTCAGGGTGGAAGATGACCAACGAAGAACCTCTTCCTAAAAAGGTCCGACTGAGTGAAACAGATTTCAACATTATGGCACGGGATGAGTTAATTCTAAGTTGGAAACAATATGAAACATATGTTCAAGCTTTGGAGGGAAAGTACACAGATCTTAATTCAAACGATGTGTCTGGTTTAAGAGAATCTGAAGAAAAACTAAAGCAGCAAAGCAGGAGTCTGCACACAGGGGGAACATTCTTGTCATGTAGCTAGCAACCAAGGAGCAGAAGATGCAAGAGTGCACTACTCAAATCCAGTACCTCAATCAAGTTCCACAGCCAAGTGTGACCCAACTGAGATCAACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAACATGAAAGGTGAACTGGAACAGACTAAAGACAAACTGGGACAAGCCCAAAATGAACTGAGTGCCTGGAAGTTTACTCCTGATAGGTAAACAAATCATATTCCCCAGTCATGACTTCCCTGACAGTCCCACCTCAAGAAAGCTGTTGTGGGACAGCCCACTACTCGTTTGTACACCAAGACTCAGACGttttgagcaaaaaaaaaaaaaaaagacacattctTATTCTGTCCAGCTTGTAATGGTTAATGTAATACTTACAGGATGAACCTTGTTTTtcagcttctttctctttccctttcactTGTTTCAGAGGCCTGATGCCTTCGAACTATTCTGAAGAAGAGGCCAACTCTGAAAAATTCCCTTTCTAGGTCGTGTAGACACATAGAGAAGTGTTTCTGTTTGAGGAAAATAGAGGGAAAAACAGAAGTCTTAAGTCTGTGGCACACTGTGTCTTCAGACAGTTTTGAGGACTGAAATactagaggCCTAGAGGTTTTAAATCATGAACTGAACAggtaaaatgtaaaaatgtaataTGCATCACTCTTAACCATGAGCATAGTGACTTAGAGACACTGTACATCAGTAATGCCAATAAGACTGTGGACTTCATGATTGTTGAACTACTGGGTCAAAACTCAAATGAGGTGAATTTGCCTTTATTAAAGGATTTACTTGCTAAGACCCAACTAATAGCCATACGACAATCACGTCATAGCTACCAGTACAAGTAGAGCATATATTTATCCACTTAGCTCTGAGCTCTATATTATATAATGGAGCCTTAAATCTAAGTGGTTTTTATCaatggtttgttttttgaatggTTGTGGAAACTGTAGATAACCTTATCTGAGGACTGTACAAACGTGAAGGTGTAGTCTCACACTTCAGGTTTAAACTGTTTGAAGCACTATAAGAATTCATTTCATAACTAGATCGTATATGGTGTTTGGCTGTGATGAGACTCTCATTATTCAGTAAACCCTCATCTCATTCAGTAGGCACATGTTAAACAGCATTGTCATTGGTATGAAATGGAGGAATGTGTTCCTTCATTGTATTGGGCCTTTTGTATCAAATTCTTGATATTAAATTAAAtgtgccttgaaaa |
>NM_175394.2 |
CGGGCCCGCCCTTCTCTCCGGCCGCTTCCCTTCCCAGCCCCGCTGAGCTTGCAGAGCCCCGACGGGGCCGGTGCGGGCTTCCGCGGACTGTCTCCGTGCGGCGGCGGCGTAGTGCCGCTGCCTCTCCGCGCCCCGAGGTCCCGAGCGGGGCCGAGCCGGCCGCCCCTCGCCCCTTCTCTCCAGAGGCGCCCGGCGCGGTGACCGAGGAGGCGCCCGAGAGGCGCGTCTCGGGGTGCAAGATGACCAACGAAGAACCTCTTCCTAAAAAGgTCCGACTGAGTGAAACAGACTTCAAAGTTATGGCACGGGATGAGTTAATTCTAAGATGGAAACAATATGAAGCATATGTTCAAGCTTTGGAGGGAAAGTACACAGATCTTAATTCAAACGATGTGACTGGTTTAAGGGAATCTGAAGAAAAACTAAAGCAGCAACAGCAGGAGTCTGCACGCAGGGAGAACATTCTTGTCATGCGGCTAGCAACCAAAGAGCAGGAGATGCAAGAGTGCACCACTCAAATCCAGTACCTCAAGCAAGTTCAGCAGCCGAGTGTGGCCCAACTGAGATCAACAATGGTAGACCCAGCAATCAACTTGTTTTTCCTAAAAATGAAAGGTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTGAGTGCCTGGAAGTTTACGCCTGATAGGTAAACAAATCATACTCCCCAGTCAAGACTTCCCTGACAGTCCCACCTCGAGAAAGCTGTGGTGGGACAGCCAAGTACTCGTTTCCACACCAAGACTCAGACTTTTTGAGCCAAAAAAGCCACATTCTTATACTGTCCAGCTTGTAATGGTTAATGTAAAACTTAGCAGATGAACCTTGTGTTTCagcttttctcttcccctcccccttgcttCAGAGGCCTGATGCCGTCGGACTATTCCGAAGAAGAGGCCAACTCCGAAAAATTCCCCTTCTAGGACATGTAGACACTTTGAAAAGTGTTTCTGTTTGAAGAAAATAGAGGGAAAAACAGAAGTCTTAAGTCTGTGGCACACTGTGTCTTCAGACAGTTTCGAGGATTGAAATCCTAGAGGTTTTAAATCATGAATTGAACATGTAAAATTCCAGTAAAATGTAAAAATGGAATATGCATCGCTCTTAGCCATGAGCATAGTGACTTAGAGACACTGTACATCAGTTATGCCAATAAGACTGTGGACTTCATGATTGTTGAACTACTGGGTCAAAACTCAAATGAGGTGAATTTGCCTTTAAAGGACTTACTTATGCTAAGAACCAACTAATAGCCGTGAGACAATCACGTCATAGCTACCAGTACAAGTAGAGCAAATATTTATCCATTTAGCTCTGAGCTCTATATTATATAATGGAGCCTTAAATCTATGTGGTTTTTATCAATGGTTTGTCTTTTGAATGGTTGTGGAAACTGTAGATAACCTTAACCAAGGACTGTACAAACGTGAAGGTGTGGTCTCACACTTCAGGTTTAAAGTGTTTGAAGCATTATAAGCATTCATTTCACAACTAGATTGTATATGGTATTTGGCTGTGATGAGACTCCCATTATTCAGTAAACCCTCATCTCATTCAGCAGGCACATGTTAAACAGCATTGTCGTTGGTGTGAAATGGGGGAATGTGTTCCTTCATTGTATTGGGCCTTTTGTATCTATCGAATTCCTGATATTAAATTAAATGTGCCTTGaaatagttgggttttttttaattcaaggaatACTCTGATAATTTTGTTGTATTCAATATTTTACTTTGGGGGGCTATGGAGAGCAGATCAACACTTTGGAAAATTTATTCTGTGCTCTTCAAAGTGAAGGGAAAGGCTGTCTCGCTTAAAAGACTATTCCAGATGGTATAAAAGACAAGGAGACTTGGCATTTGGCCCCAGGATATTACAGTAGAACATATTGTGGGACAGTCTCACAAGGTGCCTGCCAGAAGATTGGGGAAATAATGTGTTGGATCTCTGGGCTGGCCCAAGTGAGATGGTTTGTGAATTGAAAAAGGTATAGTGATCATTTCTAGCAAACTCATTTGCTCATTTAGATAAATGAGGCATTATATTCTTCATGCTTCCATCCAATCCTGGAGGTGAATTTTTTTCGTCTATAAGTCACCAGTTTGAATTTTCCCTTGGTGATAATGGAGTCTGAGATGAGTAGAAGATAAATGTTCCAGCATGCCCCAACGTTTAAGTGCAGTTTTAACAAGGGTGACTTAAGTTCTCTCTTAATCGTTCCAATCAATTGTAAGTATGCTTATGTTTGTGCTTTAGTGGACTGACTGTGGGCAGGGTGGGCTGGAGGAATGATGTGTATAATTTTTCAGGAACAAGTCTGCTTCTAAAATTGTCACTGGGGGTTTGGAGGGTAAGTAAACCAGTCTGTTTAAAAGTAGTTTATTGTGACAAAATTGgatcttttgtatttatttcatgcatTTTCAGGTTCATGGTTGAAATGATTCTGAATATAGTTTTAGTGGGTTGAATAGTAATTGGTAAAATGTATTGCTAGTATGTACTCAGATTTAGCCAGTCTTTCTCTGCTGCTTGAATACAGTGACTTTGAGGCCTGTGGGCCTGCTTTCTTGTTATTGTTAATCTTCTCTCTTAATAAGACAATACATGTTCATGTATACAAATGAAATACTAGAGAAAGATGGGAGATGGAAAGTGTCACTCATGGACCTGATGTCAAACTACCCCATTCTGCTCTACAGGACCAGTACCACTGTTAAATATCTTGGGTGTCATCGAGATAATTTGTGGATACACAATGATTTCATGTATATtggttttaaagaaatgtaatcaTATGGTACATACACATGCTTCAAAGCTTTATTATTTCCCTTCATTTTTATCTTCTAGGTATTTTTTTAGCATATCTAGATTACTACCTTTTTAATGGTCTCTTagtattttttaatcttattttaacaACCCATCAATGAGGTTTCATTATATAAAACTAAACCATGTGATATAATGAATCAAGTACTAAAACTACATTATTAATTTGAAAATAAGTAGTACTTAATTAGTAATGTGGAATGATTCCAATGATTGGGTTGTAAGGTTTCCTATATGTATATGGTATTCCTGCCCTTTGCTGCAGGTCTAATTTTGAGGGATAAAGATCTTtttagctggatgtggtggcttatgcctttaatcccagcagtgatGAGGCTGATACAGAAGGAGAGGGGACTTAGGAGTACGTTCATAGATTTgtatctcaaagaataaacaaaagaacTACTAAGAAATGGATTGTGATTCCTTCCATAATATTGTCAGCTCTACACTTTCATTTGACAACACAATCATTGTAAGAGTGTTTAGGAATATACTGGTCATTTTCAACTTAGTCATTTAGGCAGTTGTATGTACAACTCTACAAAGTAACCTGGCTTCCTTCCCTTGATTATTAAGGTAATATACTGATGCCCCTTGTGTTTTAAGTATTTCCTGTTACTGGGATTATTTGGTTTTAGGAGTcacctcagcacttaggaggcagaggcaggcagatcaggaAGTTGAGTGTAGCCAGGACATCACAttgagaaacaaaaggaactagaGGGTTTGGCCCAGTGGTTAacaactggctgctcttccagaggacccagattcaatttccagcacctacatggcaacttACAGCTTTCTAAAACTCCAGTCCAGGAGAACTAATATGCTTCCCTCTAGCACCCGGCGTGCATGTGTTGCATAGActtacatgcaaacaaaatacccacactcatgaaaagagaacagaaatatttttaaaatacaaaggcattttattttttaaagacttatttgtatgtatatgtgagtgattTGTCTACATGTCTTTCTCTCCACcatgtgcatatggaggccagaagaggatgtcaggtcctttagaattggagttatagaaggTTGGGAGCCAGCATGTGTGTGAtggggatcaaacctgggtcctgtaaagtagccagtgttcttaactattgacctcactttccagcaccaatttttaaattttttttttaatgaaagcaaTAACCTCTACTATCCATTTTAAAATAGTTGTAgttaagttctctctctttctacttatTTTGTGTTGCTGAGGATTGGATCTAGGGCTTTGACATGGCTAGATGAGCACTTTACAATAGAGCTATATCCTTAGCCTTTTCTTTGGTGAAGAGTACTAAGGATTGAACCCATGACCTCACTTGCTAAATAAACTCAGAGTACACTCCCAGGTCCCTCACTGTTTTATGTGtggagtgtgtttatgtgtgctgtTATAACCACAAGTACAGATTTTATACAACATAGTTgctaacataaaaattaaagcagTTTTGAGGTATTTTAGAGGTactccttgagacagggtctctctgtgtgtctagtGCTGGCCTATAAAACTAACTTCAGTTTATGCTAGGACAATATCAGCCTGCTAAGCATTAAGCTATGttacacatttttaaataaaatactttaacatttttgatatttttgtatGGGGCTAAGGCAAGTGACCAATTaatgtattttatacttttttttaaagtctttattttctggcTAGAAAATCTGTTGTATATGATTCCAAGAAACAGGTAGCCATAACTTTAATCCAATACTTACAAAGTAATACAAACTGTAAGAACAgtcagttccagggcagccaggggtaGTAAGAATCTTTCTCTCCCCTcacccccttttttgttttgtttcattttgttttttttttttgagacaggatttctttgtgtagtcctggctgtcctagaactcgctctgtatatcaggttggcctcaaactcagaaatcttgcctgctgggattaaaggcaaacacGTGTTgggccagaccctgtctcaaaagaaaaaaagaaacgaaGTTATTGGAATATGGGTAGC |
PMID - Link | Title |
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No publications available for this retrocopy |