Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Retrocopy Name WIZP1
Plot displaying the genomic locations of a retrocopy (in chr11) and its respective parental gene (in chr19). Each line represents a retrocopy.
Species Homo sapiens
Coordinates (hg38) chr11:23403385-23407050  UCSC
Coordinates (T2T) chr11:23527199-23530864  UCSC
Coordinates (hg19) chr11:23424931-23428596  UCSC
Strand +
Parental Sequence NM_001330395.4
Parental seq. overlap 3227 bp
Parental seq. overlap (%) 54.1%
Genomic Region Intergenic
Retrocopy Summary WIZP1, located on chr11:23403385-23407050, is a retrocopy of the parental gene WIZ. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name WIZ
Full Name WIZ zinc finger
Also known as ZNF803
Coordinate chr19:15419978-15449956
Strand -
Gene summary Enables several functions, including DNA-binding transcription factor activity, RNA polymerase II-specific; histone methyltransferase binding activity; and transcription corepressor binding activity. Involved in positive regulation of nuclear cell cycle DNA replication and protein stabilization. Located in midbody and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]

Homology

Species Scientific Name Retrocopy
Chimpanzee Pan troglodytes WIZP1
Bonobo Pan paniscus WIZP1
Gorilla Gorilla gorilla WIZP1
Orangutan Pongo abelii WIZP1
Green monkey Chlorocebus sabaeus WIZP1
Crab-eating macaque Macaca fascicularis WIZP1
Rhesus Macaca mulatta WIZP1
Baboon Papio anubis WIZP1
Golden snub-nosed monkey Rhinopithecus roxellana WIZP1
Gibbon Nomascus leucogenys Without Homology
Marmoset Callithrix jacchus Without Homology
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>WIZP1
GGGAGCCAAGATGGCCGCCTCCACCGCCCAGTTTCGTGACAGAAGCGGAGAGCAAGGCGGCGGCGGGGCCGCGCGCTGGGCGCGACGGGAGCGCGCGCCCGCCTGGCCACCCCAGCCCAGGCTCCCGAGCCCGGGCCCTGCGGCACAGGCCTGGGTTCTGAGGAAAAGGCAATGGTGGCCATGGACCTGGGCTCTCTTCACTCCCTAAGAAAAGCCTGCCTGTCCCTGGGGCCCTGGAGCAGGTGGCCAGTTGGCTGAGCAGCAAAGTGGCTCCAGAGGTTCCTCATGGCAGCAAACAGGAGCTGCAGGACCTCAGATCCCAGAGCCTGCCACCTGCAAGGTCTGTGGCGCCTGCTTTGGGACCGGAAAGGGCCTGTCCATCCACACACGCTCCCACCTGCGGCAGCTGGGAGTGGCAGAGTCAGAGACGAGCGGCGTACCCATCAACCTCCTCTAGGAGCTTGTGAAGCAGAAGAGCATGCCCGACGCCCACCTTGGGCTGCCCCCGGGCCTGGCTAAGAAGTCCAGCTGGCTGAAGGAGGTGGTCGCCCGGGACCCCGGCCCGGCTTGCTTACCCTGGCCAAATCCTTGGATGCCCCTGCTGTCAACAAAACCATCAAGTTGCCTCTCGGCTTCTCGACCAAGGGCCTGGGCCAACTCCCAGCTCTCCGCTCCTTGAAAAGACACCACTGGCCCTGGAGGGCTCCCCTACTCCTAAGAATCCTGAGGACAAGAGCCCCGAGCTATCCCCGAGCCCATGGCCGGCCTCCCAAAAGGCACAGTGGCCTCAGTCAGGCCCTTGAACCTCACCTCAGGCCTAGAGCCAGCACAAGAAATCTGTTGCTGTGAGTTCTCTGGTGAGTTCTTCTAGAACCGCAAGGGCCACTCGAGCCACACGGGCTCCCACCTGCAGCAAATAGGCGTGACCGGGGGGTACGTCAATGGCTCGCCCATCGACAGACTGTGGGAGATCCTGAAGAGACGGACCCAGTTTCGCTCTGGCAGACCTCCCAACCCGCCAGGGCCAAGTCCAAAAGCCCTGGCCAAGATGATGGACGGCACAGGTCCTGGCAGCTCACTGGAAACCCGCAGCCCCTCTGACCTTCACATCTCACCCTTGGCCAAGAAGTTGCCGCCGCCACCAGGCAGACCCCTGGGCCACTCACCAACTGCCTTTCCTCCTCCCGTGCCCGGAAGATGTTCCCAGGTCTGGCTGCACACTCCCTGCCCAAGAAGCTGAAGCCTGAACAAATACGGGTGGAGATCAAGCGGGAGATGCTGCCGGGGGCCCTTCGTGGGGAGCTGCACCCATCTGAGAGTCCCTGGGAGGCACCACGGGAAGACATGATACCCCTGAACCTGTCTTCCCGGGCAGAGCCGGTGCGCAATATCCCCTGTGAGTTCTGCAGCGGGTTCTTTGAGAACCGCAAGGGCCTGTGTAGTCACGCACGCTCCCACTTGCTGCAGATGGGTGTGACCGGGTGGTCCGTCCATGGTTCGCCCATTGACACTGCGAGAGATCCTCAAGAAGTCCAAGCTGTGCCTCATCAAGGAGGAGCCACTGGCTGCAGACCTGGCCCCGGCCTTGGCTGAGGATGGGCCTCCCACTGTGGTCCCTGGGCCCGTTGCCGGTATCTTCTGGCCGGCCAGGCAAACCAGGCTCAGGGCCGGCCCAGGTTTCCTCGCGAGCTCAGCCTGAAGCCCATCACTGGGGCCAAGCCCTCACCCACTGGCTACCTGGGCTCAGTGGCAGCCAAGTGGCCTCTGCAGGAGGACTGCCTCCTCCCAGCAGAGGTCAAGGCCAAGACCTACATCCAGACTGAACCGCCCTTCAAGGCAAAGACCCTTCACGAGAAGACCTCCCATTCCTCCACCGAGACCTGCTGCGAGTTGTGTGGGCTTTACTTTGAAAACCGCAAGGCTCTGGCCAGCCACGCACGGGAACACCTGAGGCAGTTCGACGTGACCGAGTGGTGCGTCAGTGGTTCGCCCATCGAGACACTGAGCGAGTAGATCAAGCACCAGCCCCAGAAGGTGGGCACCTACCACAACTACATCCAGGGCGGCTGCCCCTTCACCAAGAAGTTCCCCAGTGCCATCCATGGCCGTGACAGTGACAAGCGGCCGTCCCTGGGGCTGGCACCTGGGAGCCTGGCCATGGTAGGACGCAGCGCTGGGGGCAGGGCCTGAGGCTGGCGCGGCAGTCGACAGTGGTAAGAGGCCTCTGGCAGCCAGCCCGCCAGGCACCGTGAAGGCTGAGGAGCACCAGCCGCAGAACATCAACAAATTCGAACGCCGACAAGCTCGCCCTGCAGATGCCTCCGCAGCCCGGGGAGGTGAGGAGACCAATGACCTACAGCAGAAGCTGGAGGAGGTGAGGCAACCTCCAACCCGAGTCCGGCCAGTCCCCTCCCTGGTGACCTTGACATCACTTGTCAAGTTCGTGGGCAACATCTACACGTGTCCTCAAATGCAGGTTCTGCGAGGTGGAATTCCAGGGCCCCCTCTCTATCCAGGAAGAGTAGGTGCGGCACTTACAGCGGCACATCCTGGAGATGAACTTCTCCAAAGCGGACCCCCAGCCTAAGGAGTCCCAGGTCCCGCAGGCACAGACAGTGGCGGCAGAGGCTTCCTAACACAAAAGCATTCCAGATCCCCTCTCGTGCCACCTATGTCATAGGAGTAAGCCAAAACCTCAAACCAGCGCCCCCTTGGGGGCTGGGCACACTACAGCCAGGGCGCCGGGAGCCAGCTAGCCGCCCTTCCCCCAGCCCAAAGACTCTGGGACCACAGGGTGTCTTCCTTCAGCCTATGCCCACCTGGTCCAGCAGGGGCAGCAGCCAGGTCTCGGGTGGCAGCCGATCTGGTCACAGGGGAGGACAGCATTCCCCCGTCTAGCAGCCAGGCAGGGCGATGTCTGCCATCGGTGGCCATTTGCAAAGACCCCAAAGACCCCTGTTCTGGTTTCCTCTCGCCCCCATGAATATCCTCTCAAACGCGTCTACATGCGAACACACACGCACCTCGTGAGACCTGGGATCTGCCCCGGACCCCCAGTTCCAGGGTTGAACGACCACATCATGCCACAGTGCTTGCTCAGGGGAAGCCACGCTCCCTCTGTGGGGCCCGCTGGAGCCTGGGAGCCCCCCACTGACCCCACAATGCCACGGAAATCCTTGTTGGCTGCCCCCCAGAGGGGCCTTCCCAACTGGGAAGAGCCTAGAGCTGACAGCTGGCTCCTGCCATGTCAAGACTCCCAAAGAGCGGGGTGGGAtTTTCACTGTTGCTTTCTATGTATGGCTCCCTACATTTTTCACTTTTTTAAAAACGCGTTTTGTGTATAAAATAAAGAACGTGGATCTTTTTATTTTGCAATCCTGGGCCAGCTAGAAGCCAGGAGCTGATTGACCTTTTAGCTTTTTTCAGTGGCCGCATTTTGATTATCGATGTACCTAGAAGTATGTAAATTAGATTAAATTTCTCTTCTGGAAA
>NM_001330395.4
ACTCGGCGCTCAGCTGCTCCCGCCTGGGGCGGCCGCCCCGCGTGCGCCGGAGCCAAGATGGCCGCCTCCACCGCCCAGTGCCGAGTGACAAAAGCGGAGAGCAAGGCGGCGGCGGGGCCGCGCGCGGGGGGCGCCCGGGAGCGCGCGCCCGCGGGGGcgcccccgcccagccccccgagcccgggccccgcggcaccccccgcgccgccgccgccgcccccacccccgccgccgccgccaccaccaccgccaccgccaccgccgccgcGGGACGGGCCCAAGGCCGAGCCGGAGCCGGGGCCCGGGCCCGCGTCCGCTCCCGCGCCCGGCCTGGGTTCTGAGGAAAACGCAATGGTGGCCATGGACTTGGGCTCTCCCTCGCTCCCTAAGAAGAGCCTGCCTGTCCCTGGGGCCCTGGAGCAGGTGGCCAGTCGGCTGAGCAGCAAAGTGGCTGCAGAGGTTCCTCATGGCAGCAAACAGGAGCTGCAGGACCTCAAGGCCCAGAGCCTGACCACCTGCGAGGTCTGCGGTGCCTGCTTTGAGACCCGAAAGGGCCTGTCCAGCCACGCGCGCTCCCACCTGCGGCAGCTGGGAGTGGCAGAGTCGGAAAGCAGCGGCGCACCCATCGACCTCCTCTACGAGCTTGTGAAGCAGAAGGGTCTGCCTGACGCCCACCTTGGGCTGCCCCCAGGCCTGGCTAAGAAGTCCAGCTCACTGAAGGAGGTGGTCGCCGGGGCCCCCCGGCCCGGCTTGCTCAGCCTGGCCAAGCCCTTGGATGCCCCTGCTGTCAACAAAGCCATCAAGTCGCCTCCCGGCTTCTCGGCCAAGGGCCTGGGCCACCCGCCCAGCTCTCCACTCCTCAAAAAGACACCACTGGCCCTGGCGGGCTCCCCTACCCCTAAGAATCCTGAGGACAAGAGCCCCCAGCTGTCCCTGAGCCCCCGGCCGGCCTCCCCAAAGGCACAGTGGCCTCAGTCTGAGGATGAGGGGCCCTTGAACCTCACCTCAGGCCCAGAGCCAGCACGAGACATCCGCTGCGAGTTCTGTGGTGAGTTCTTCGAGAACCGCAAGGGCCTCTCGAGCCACGCGCGCTCCCATCTGCGGCAAATGGGCGTGACCGAGTGGTACGTCAATGGCTCGCCCATCGACACGCTGCGGGAGATCCTGAAGAGACGGACCCAGTCTCGGCCTGGTGGACCTCCCAACCCACCAGGGCCAAGCCCAAAAGCCCTGGCCAAGATGATGGGCGGCGCAGGTCCTGGCAGCTCACTGGAAGCCCGCAGCCCCTCGGACCTTCACATCTCACCCTTGGCCAAGAAGTTGCCACCACCACCGGGCAGCCCCCTGGGCCACTCACCAACTGCCTCTCCTCCTCCTACGGCCCGAAAGATGTTCCCAGGCCTGGCTGCACCCTCCTTGCCCAAGAAGCTGAAGCCTGAACAAATACGGGTGGAGATCAAGCGGGAGATGCTGCCGGGGGCCCTTCATGGGGAACTGCACCCATCTGAGGGTCCCTGGGGGGCACCACGGGAAGACATGACACCCCTGAACCTGTCGTCCCGGGCAGAGCCGGTGCGCGACATCCGCTGTGAGTTCTGCGGCGAGTTCTTCGAGAACCGCAAGGGCCTGTCGAGTCACGCGCGCTCACACCTGCGGCAGATGGGTGTGACCGAGTGGTCCGTCAATGGTTCGCCCATCGACACACTGCGAGAGATCCTCAAGAAGAAGTCCAAGCCGTGCCTCATCAAGAAGGAGCCACCGGCTGGAGACCTGGCCCCTGCCCTGGCTGAGGACGGGCCTCCCACCGTGGCCCCTGGGCCCGTGCAGTCCCCACTGCCGCTGTCGCCCCTGGCTGGCCGGCCAGGCAAACCAGGTGCAGGGCCGGCCCAGGTTCCTCGTGAGCTCAGCCTGACGCCCATCACTGGGGCCAAGCCCTCAGCCACTGGCTACCTGGGCTCAGTGGCAGCCAAGCGGCCCCTGCAGGAGGACCGCCTCCTCCCAGCAGAGGTCAAGGCCAAGACCTACATCCAGACTGAACTGCCCTTCAAGGCAAAGACCCTTCATGAGAAGACCTCCCACTCCTCCACCGAGGCCTGCTGCGAGCTGTGTGGCCTTTACTTTGAAAACCGCAAGGCCCTGGCCAGCCACGCACGGGCACACCTGCGGCAGTTCGGCGTGACCGAGTGGTGCGTCAATGGCTCGCCCATCGAGACACTGAGCGAGTGGATCAAACACCGGCCCCAGAAGGTGGGCGCCTACCGCAGCTACATCCAGGGCGGCCGCCCCTTCACCAAGAAGTTCCGCAGTGCCGGCCATGGCCGTGACAGTGACAAGCGGCCGTCCCTGGGGCTGGCACCCGGGGGCCTGGCCGTGGTCGGCCGCAGTGCCGGAGGGGAGCCAGGGCCCGAGGCTGGCCGGGCAGCCGACGGTGGTGAGCGGCCTCTGGCAGCCAGCCCGCCAGGCACCGTGAAGGCTGAGGAGCACCAGCGGCAGAACATCAACAAATTTGAACGCCGACAAGCCCGCCCTCCAGATGCCTCCGCAGCCCGGGGAGGCGAGGACACCAATGACCTACAGCAGAAGCTGGAGGAGGTGCGGCAACCCCCACCCCGAGTCCGGCCAGTCCCCTCCCTGGTGCCCCGGCCCCCCCAGACATCACTTGTCAAGTTCGTGGGCAACATCTACACCCTCAAATGCAGGTTCTGTGAGGTGGAATTCCAGGGCCCCCTCTCCATCCAGGAAGAGTGGGTGCGGCACTTACAGCGGCACATCCTGGAGATGAACTTCTCCAAAGCGGACCCCCCACCTGAGGAGTCCCAGGCCCCGCAGGCACAGACAGCGGCGGCAGAGGCTCCCTAACACAAAAGCATTCCAGATCCCCTCTCGTGCCAcctctgtctcctcttcttcctcctctgtgtccttgtccctcttcctctttctttccgtttccAAAGGAGCAAGCCAAAACCTCAAACCGGCGCCCCTTGGGGGCCGGGCACACTACAGCCAGGGCGCCGGGAGCCAGCTAGCTGCCCTTCCCCCAGCCCGAGGACTCTGGGGCCACAGGGTGTCTTCCTTCAGCCCATGCCCACCTGGTCCAGCAGGGGCAGCAGCCAGGTCTCTGATGGCAGCCGGTCTGGTCACAGGGGAGGACAGCACTCCCCCGTCTAGCAGCCAGGCAGGGCGATGTCTGCCATCCGTGGCCATTTGCAAAGACCCCAAAGACCCCTGTTCTGGTTCCCTCTCTCCCCCATGAATATCCTCTCACACACATGTACATGCGAACACACACAACACGCACCTCGTGAGACCCGGGACCTGCCCCGGACCCCCAGTTCCTGGGTTGAACGACCACATCATGCCACGGTGCTTGCTCAGGGGAAGCCACGCTCCCTCTGTGGGGCCTGCTGGGGCCTGGGAGCCCCCCACTGAGCCCACAATGCCACGGAAATCCTTGTTGGCTGCCCCCGAGAGGGGCCTTCCCAGCTGGGAAGAGCTCAGAGCTGACAGCTGCCTCCTGCCATGTCAAGGCCCCCCAAAGAGCCTCAGGGGCTCTGGGGCCCTGGAGGGTGGGGTTGGGGGGTGGGACTCTCCTCCCCCACTCCTGCTCCCTCTCCCTTTTCACTGTTGCTTTCTATGTATAGCTCCCTAGACCTTTCACTTTTTTAAAAACGCGTTTTGTGTAGAGAATAAGGAACGTGGATCTTTTTATTTTGCAATCCTGGGCCAGCTAGAAGCCAGGAGCTGATTGACCTTTTAACTTTTTTCAGTGGCCACATTTTGGTTATCGATGTACCTAGAAGTATGTAAATTAGATTAAATTTCTCTTCTGGAAACACCCTGGGGCAGGCGGCCAGCGTGTGTTTTTCTGTCAAGTGGACAGGCTGGCATTGGCTGGCAGCCGGGGCTGGGATCGGGGCCTCCTCTGTCCAGAGCGCCATGGAGGCCCTGGGTTTTCCAGTTGGCCGCCAAGCCGACCAGACGCAGCTGGGGATGAGCCCAAGTTCCCAGCTGTTGGCTCTTTAGGCCATGGCTGGGAGGGGGTCTCTGGCTGGCTGGCAAAGCGGCTCCAGTGAGCAGATGAACCAGGGTTCTGGGCAGCCTGTCTGGGAAGGGAGCCAGGATCAAGAAGCAGTTGAGGCTAGAGGAGCTTATCAAAGGCAGGAGCTACCAGCGAGGGTGTCAGGGACCCGTTGGGAGCATTTGGGTGGGGGCCAGTGGGGTTGTAGAGAGCTGGAACTCACCTGCTTTTAATACATGTGACTTCTAGTGAGACACATGCACCCCTGACCCAAGGAACATGCGGGGAAAAGAGGAGCCACTGGCTCCTTTGCGATGTTATTTATTTTCTCGCTCTGCAAATGTTTATTGAACATTTCTGAGATTTTAAGAGATTTTGTTGGCTGCTCCTTCTTGTTTATTGCATGTGGTTTTTCAGCTCATCGTTTTTACTAAACGGTCAAGTGCTGGAGAGTGGGAACGACCTCATGGCGTGTGGACAGAAGGGGCCACCTCTACCCCCAGCCCTGCTTTCTGGGCCCTCCCACCATACCCCTTCCTGGGAAGGAGGGATTAACAGGCTGCAATAACGCCCACAAGGGTGGTCTTGGCCCACACGTCTGCTCCTGTGGGGTCAGGACGCACATCTCGCCTGGTGGCAGAAGGCCGCAACCACTTCTCTCCATCCTGTGCTGTGGGTGGGTGGATGTATCCAGGACTTAGGAAGCAGGGAGAGCATCTTGTGAGCTGACTCAAAGGTGTTTCTTCCTCTTTCAACTTTTCATAAGTCAGtttttatttttttattttattttttgagacagggtctcattttgttgcccaagctggagtgcagtgtagggacctcggctcgctgcagtctctgcctcctgggttcaagtgattctcctgcctcagccatccaggtagctgggatcacaggcatgcaccaccacccctggcttatatctgtaatttttgtagagacgggggtttcaccatgttgcccgggctggtcttgaactcctgagctcaagtgatcagcctcccaaagtgctgggattacaggcgtgagccactatgcccggccCGTAAGTCAGTTTTTGAAATATAAAAGTGGTATAGGCTAGATGTGACAAAAAACAGTCAAATGATACAAGAGCTTATAAAGTCATATGGCAAGTTCCTCCCCACCAATCATGCAGTGAAGTGAGGGTCATGTGTGTCCTTGGAAGAGTCACCTCCAGTTCTTGCAGGGGGATGTTTTCCTAAAACTTTCTGAGCATTGCTCTTCTCTGCTCAAGCCACTTCAATACACCTCAGGCAGCAAAGTCTCAGCTTTTGAGCCGTGGTCTCTGAGGGTGTTGGATGTGAACGAAATCAAATCGGTACAATGATGACTGTGGCAAGTGCGATGAAGGAACGAACCTGCAGGGCGCAGAAGACGTGTCCTGGGGCCCTGCCTTGGTTTGGAAGACAGGCAGGCATCCCTGAGGCTGATGGGGAGATGAACCCCGAAGCCAGAGTGCTTATCCGTCAGATCTCTGCTTCATGTTTGGAGTTTGCTCACTTAACACATCAGAAGTGGCTTTGTTCCGTATGGCAGCAAGTTCTGCAGAAGCCTCATTTGGGTGGGGGGAGttttattaaaacagtttatcatggagaattccaactatacaaaagtagagcaaacagtaaaatggactctcatctatccatcaccaacccatgaccaatgtcttcagctgtcagagatttatcttatagctccttgcttcctcctcctctctctacctgtctgaattgtgtgaagcacatcctggccataagatcagttaacttcttagtatttcagtatgtttctctcaacgttgtaaatgccactattacacctaaagaaatcaacaataTCAAAAAGAAACAGCATACCTTAAAAAAAGTTTTAAAACACA

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