Retrocopy Name | ZNF347P1 |
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Species | Homo sapiens | |
Coordinates (hg38) | chr12:67978110-67978431 UCSC | |
Coordinates (T2T) | chr12:67957699-67958020 UCSC | |
Coordinates (hg19) | chr12:68371890-68372211 UCSC | |
Strand | - | |
Parental Sequence | NM_001172674.2 | |
Parental seq. overlap | 257 bp | |
Parental seq. overlap (%) | 3.1% | |
Genomic Region |
Intergenic |
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Retrocopy Summary | ZNF347P1, located on chr12:67978110-67978431, is a retrocopy of the parental gene ZNF347. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | ZNF347 |
Full Name | zinc finger protein 347 |
Also known as | ZNF1111 |
Coordinate | chr19:53134935-53159053 |
Strand | - |
Gene summary | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022] |
Species | Scientific Name | Retrocopy | |
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Chimpanzee | Pan troglodytes | ZNF160P1 |
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Bonobo | Pan paniscus | ZNF347P1 |
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Gorilla | Gorilla gorilla | ZNF160P1 |
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Orangutan | Pongo abelii | ZNF347P1 |
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Gibbon | Nomascus leucogenys | ZNF160P1 |
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Green monkey | Chlorocebus sabaeus | ZNF841P1 |
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Crab-eating macaque | Macaca fascicularis | ZNF841P1 |
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Rhesus | Macaca mulatta | ZNF841P1 |
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Baboon | Papio anubis | ZNF347P1 |
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Golden snub-nosed monkey | Rhinopithecus roxellana | ZNF347P1 |
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Marmoset | Callithrix jacchus | Without Homology |
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Mouse lemur | Microcebus murinus | Without Homology |
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Mouse | Mus musculus | Without Homology |
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Rat | Rattus norvegicus | Without Homology |
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Chinese hamster | Cricetulus griseus | Without Homology |
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Rabbit | Oryctolagus cuniculus | Without Homology |
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Pig | Sus scrofa | Without Homology |
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Cow | Bos taurus | Without Homology |
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Sheep | Ovis aries | Without Homology |
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Dolphin | Tursiops truncatus | Without Homology |
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Horse | Equus caballus | Without Homology |
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Dog | Canis familiaris | Without Homology |
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Panda | Ailuropoda melanoleuca | Without Homology |
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Cat | Felis catus | Without Homology |
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Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
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Velvety free-tailed bat | Molossus molossus | Without Homology |
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Greater mouse-eared bat | Myotis myotis | Without Homology |
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Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
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Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
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Egyptian rousette | Rousettus aegyptiacus | Without Homology |
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Sloth | Choloepus didactylus | Without Homology |
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Tasmanian Devil | Sarcophilus harrisii | Without Homology |
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Opossum | Monodelphis domestica | Without Homology |
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Platypus | Ornithorhynchus anatinus | Without Homology |
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Chicken | Gallus gallus | Without Homology |
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Turkey | Meleagris gallopavo | Without Homology |
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Zebra Finch | Taeniopygia guttata | Without Homology |
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Budgerigar | Melopsittacus undulatus | Without Homology |
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Painted Turtle | Chrysemys picta | Without Homology |
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Lizard | Anolis Carolinensis | Without Homology |
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Frog | Xenopus tropicalis | Without Homology |
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Zebrafish | Danio rerio | Without Homology |
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Drosophila | Drosophila melanogaster | Without Homology |
>ZNF347P1 |
CAGGAAGAAGCCTAGAAGAGGAGGAAGAGAAAACAAAAGGAGTCAGGGATGACTCCTACTCTGGGACCATTGACATTTAGGGATGTGGCCATAGAATCCTCTTGGGAGAAGTGGCCATGCCTGGAGACTCTACTCAGAGGGGTTTATGCAGAGATGTGATGTTGGAGAACTAAAGGAACTTTATCTTCCTGGGAATCTCTCTTTTTGACCTGGGTAGTATCTCCATGTTGGAGTAAGGGAAAGAGCCTTGGACTGTAGAGAGGCAAGTGCAAATAGCAAGAAACTGAAATGGGTGACAATGGATCAAATGTGTGATCACAGG |
>NM_001172674.2 |
AGTTCCGGAAGCGGATCGTGTTGGGTGCGGGTGACGCCGCCGAGCGTGAGTGTCCCTCAGTATGGATTAAACTTGCGAACCGCCGTGCCCCGTTTCCGCAGCCAGTTCCCGGGCTCGCTACAGACCtttttttttttctttttttttttttttggtgagacggagatttactcttgttgtccaggctggagtgcaatggcgcgatttcggctcaccgcatcctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccggctaattttgtatttttagtagagacggggtttcaccgtgttgcccaggctgatctcgaactcctgacctcagGAAGAACCCTTGAAGAAGAGGAAGAGGAAAGAAAGACAAGTCAGGCATGGCTCTCACCCAGGGACAGGTGACATTCAGGGATGTGGCTATAGAATTCTCTCAGGAGGAGTGGACATGCCTGGACCCCGCTCAGAGGACTTTGTACAGGGACGTGATGTTGGAGAATTATAGGAACCTGGCCTCCCTGGCAGGAATCTCTTGTTTTGACCTCAGTATTATCTCTATGTTGGAGCAAGGGAAGGAGCCTTTCACTTTGGAGAGCCAAGTACAAATAGCAGGAAACCCAGATGGATGGGAATGGATCAAAGCTGTGATCACAGCTCTCTCTTCCGAATTTGTAATGAAAGATTTACTACACAAAGGGAAGAGTAATACAGGAGAAGTATTCCAAACAGTGATGTTGGAAAGACAGGAAAGCCAAGACATTGAAGGATGTTCCTTCAGGGAAGTCCAGAAAAATACACATGGCCTTGAGTATCAATGCAGAGATGCTGAAGGAAATTACAAAGGAGTGCTTTTGACCCAAGAAGGCAATCTCACTCATGGAAGAGATGAACATGATAAAAGAGATGCAAGAAACAAGCTTATTAAAAATCAGCTTGGATTAAGCCTTCAGTCACATCTGCCTGAACTGCAGCTTTTTCAATATGAAGGGAAAATTTATGAATGTAATCAGGTTGAGAAGTCTTTCAACAATAATTCCTCAGTTTCACCACCTCAACAAATGCCTTATAATGTCAAAACCCACATTTCTAAGAAATATCTCAAAGATTTTATCTCTTCTTTATTACTCACACAGGGGCAAAAAGCAAATAATTGGGGAAGCCCTTACAAATCTAATGGATGTGGCATGGTCTTTCCTCAAAATTCACACCTTGCAAGTCATCAGAGAAGTCATACTAAAGAGAAACCTTACAAATGTTATGAGTGTGGCAAAGCCTTTAGAACACGTTCAAACCTAACTACCCATCAGGTGATCCATACTGGCGAAAAACGTTACAAATGTAATGAGTGTGGTAAGGTCTTTAGTCGAAATTCACAACTCTCACAACATCAGAAAATTCACACTGGAGAGAAACCTTATAAATGTAACGAATGTGGCAAGGTCTTCACTCAGAATTCACACCTTGTAAGACATCGAGGAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGGAAAGCCTTTAGAGCTCGTTCAAGCTTAGCTATCCATCAGGCAACCCACAGTGGAGAAAAACCTTACAAATGTAATGAATGTGGCAAGGTCTTCACTCAAAATTCACACCTTACAAATCACTGGAGAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGCGGCAAAGCCTTTGGTGTTCGTTCAAGCCTAGCTATTCATCTGGTAATTCACACCGGAGAAAAGCCTTACAAATGTCATGAATGCGGCAAGGTCTTTAGGCGTAATTCACACCTTGCAAGGCATCAGCTAATTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAAGCCTTTAGAGCACATTCAAACCTAACTACCCATCAGGTCATCCATACTGGAGAAAAGCCTTACAAATGTAATGAATGTGGCAAGGTCTTCACTCAAAATTCACACCTTGCAAATCATCAAAGAATTCATACTGGAGTGAAGCCTTATATGTGTAATGAGTGCGGCAAAGCCTTCAGTGTGTATTCAAGCCTAACTACCCATCAGGTCATCCATACTGGAGAAAAACCTTACAAATGTAATGAGTGTGGCAAGGTCTTCACTCAGAATTCACACCTTGCAAGACATCGGGGAATTCATACTGGAGAGAAACCTTATAAATGTAATGAATGTGGCAAGGTCTTTAGGCATAATTCATACCTTTCAAGGCATCAGCGAATTCATACTGGAGAGAAACCTTACAAGTATAATGAGTATGGCAAAGCCTTTAGTGAACATTCAAACCTAACTACCCATCAGGTCATCCATACTGGTGAAAAACCTTACAAATGTAATGAGTGTGGCAAGGTCTTCACTCAGAATTCACACCTTGCAAGACATCGGAGAGTTCATACTGGAGGTAAACCTTACCAGTGTAATGAATGTGGCAAAGCCTTTAGTCAAACATCAAAGCTTGCAAGGCATCAGAGAGTTCATACTGGAGAGAAACCATATGAGTGTAATCAGTGTGGGAAAGCCTTTAGTGTCCGTTCAAGCCTAACTACCCATCAGGCAATCCATACTGGAAAAAAACCTTACAAATGCAATGAGTGTGGGAAGGTCTTCACTCAGAATTCACACCTTGCAAGACATCGGGGAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTAGTCAAACTTCAAAACTTGCAAGGCATCAGAGAATTCATACCGGAGAGAAACCATATGAGTGTGGGAAACCCTTTAGTATCTGTTCAAGCCTAACTACCCATCAGACAATCCATACTGGTGGGAAACCTTACAAATGTAACGTGTGGAAAGTTCTAAAGTCAGAGTTCAAACCTTGCAAGCCATCACAGAATTCATAGTGGAGAGAAACCTTACAAATGAAGGTGGTAACTTTTGCAGTTAGAATTCATTCCTTTGACAACGTCAGAGAATTTATGCCTGAGAGATTCCTTGAAAATGCAATGACTggctgggtgcagtggctcatgcctgtaatcccaacactttgggagtccgaggcaggtggatcacctgaggtcaggagttcaagaccagcctgaccaacatggcgaaaccccatttctactaaaagtacacaattagctaggcctggtggcgtgcgcctgtaatcccagctatataggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagatcgtgccaatgcactccatcctgggcaaaaagagcaaaactccatcttaaaggaaaaaaaaaaaaTGCAATGACTGTGGCAAACTCCTCATGAGTTCAAGTATTAATAGACATCCAAGAGTCCATAATAATGAGAAATCACATAAATGTACTGTGTGTGACAGAGGCTTTATTCAGGCCTCACAGCTTTGCAGGCATTAAAATCTACGTATTTGATGGAACCACACAAATGTAATGTGTAAGAGCATCCTGAAGCTCTTACTCTAAGACTGTAACTGTAGGTGAGGATTCATACAAAGAGTGACTCAGTCTCTAGTTCTTTGATTCACTTTTAAAATGATAAACTGCACAATAATTACACGTTCCAATATGGTAAAACTTAAGACATTATATATTTCAAAGGTCAAAGGACATTTGGAAATGGCTACTTACCTTCAGGTTATAAAATCTTTTATTCCATTGTTTGAGGTTTCTCAAAAAGGCTACTGTTTGTGACTTTCAACCTGAACTATGGATCTGTGGCTATTTTGCATCCTTAAGCACCTTTCGTGGTGCCTATCTGGGAAAGAACCACAGTATGGAAAGGCTTACTTCATTACATGAGGATCATTTTTATCCATGTTTATTGAAGAAGGAGGACTCTGCCTTGTAAAATTAAATATTCTCTCAATTGAGAGACCATGGTTTTGGGGCAGAAAATAATGTAAAACTATGATATCAATCATCATACTGATTGTGTTCAGGGTGCTTTTCTGAGAGAAAGACACCATGGGTTTTAGGGAAGTAAGGCTCTACCTGCATTGAGCAGGCCAAGACCTCAGGACACTGGAATTTTTATGAGAGGAGAGTAATAAGTTATTAGTGACTGATTATGTGATGGGAATAGTGCAGGGGAAATGGTTGCCACTTTCTCTACTGAATGGCAATAGCTGTTTTATAGCAGAGATTGATGAAAAATAGGCTTATTTTTGAAATTGAAGAGGTAACAGTTATTAGAGTGGAGAGCTTGGTCAGAAAAACCAGAATACCATGGttttttttgttttgttttgtttttAGTAGAATTCACACTAATTGCTGGAATTACATTTTGCTACAGTTTTATTAAGAATGTGTCACAGACATAATGTTTTGCTAAAAAAAATTCAACGTTTTCTTATAACTATAAACAAATCACATTCTTTGTACCAACATCATTTTATCCTACCTCAGTAGGATACTTCATAGCAGATAATAACAATACACTCAGTCTTTTAGGTTGGAGGATGTAGAACAATTTTTTTTTTCTTTGTGGAATCAACATACAATTTTGGGAAAATGTAATCATACTCTGCACTTGAATTATTCTCTCTACACTCTGCCTTAGAATATTTATATGGATATAATGAAAATCCCATAGAAAGTGCAGTTTTCATACTCTTACACTCTGAAAGCTGCCACAGTGTTGGTGAATATATACCATATTATATTTTTACATGCTTGTGTGCTAAATAACTATGGCATGCATCTTTATTTACATGAAGTGAAAATACAAATATAGAAAGTGTATGggctgggtgtggtggttcatgcctgtaatcctagcactttgagagcccaaggcaggggggtcacttgagtccaggagtttgaaccagccaggacaacatggcaaaaccctgtctctacaaaaaaaatagaaatattacccaggcagggtggctcatgcctgtagtcccagctcctcagggagactgaggcaggtggatcacttgagcctggaggcagaggttgcagtgagccaagatcgcgccattgcactccagcctgggtgacagagcgagaccctgtctcaaaaaaaaCAATTGTATGAAAAATATTggctgggtgtggtggctcacacctgtaatcccagcacttagggaggccaaggcgggtggatcatggggtcagaaaatcgagaccaccctggccaacacagtgaaaccccatctctactaaaaaataccaaatatatatatattggttggatgtggtggcatgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagccgagattgccactgcactccagcctgggcgagaaagtgagactccgtctcaaaaaaaaaaaTTATGAAATTATAAATAGTGCAGAATAACAAAAATAACACTAAGAATGCTATGCTCACATAATTTGACAAGACTAATATTCATGAGTTTCCTCTTAAAAATGAACATATATAATGGAAATTTTGTTTTTGTAGGTAAACTAGAAGTTTCATAAATTTAGCCTTATCATGTTTTTGGTAATGTTAATTTgtcacctctccacaggaagtgtattgaactccatttacagtttggtttagatatggaaaatgaggatgctgaacaatgaagttttagggaaatgtgtattgcataatgaggctttctgtgagaagcaggattgacttcccaaactggtccaaaatggcttgagagagcagggataaataacttgcttggggtgttatggtaataacctttaataaaagggtgggttggggtgaggatcccacacgtgatttgaacttccatctagtgccaaaggagggaacacggacattatcagcttggccagatgggcagaataagaagagggagtgcagaggtataaatggtggtataagacaaaaatcacaaaatggaaactgactGTAGTACAACACTGAATATTTACTCTTGCAACTTCTGATTTCTGGCCAGGCATGGCCAGAAATTACAggctcatgcctgtaatcccagcactttgggagcccgaggcaggtggatcaccttaggtcaggagctcaagacgagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggcgcactcctgtagtcctagctaccagggaggctgaggcaggagaatcacttgaacccgggagacggaggttgcagtgagctgagatctcaccactgcactccagcctgggcaatagagtgagactctcaaaaaaacaaaagaaaTTTCTAACTTCTTTGTTAGGGAAGACCTCCGCTTTCTTCATAATAGTAGATAATACTCTTCCTTTCTGCTGAACCCATAGGGCCCATTACACAACGTCATTCTTGAAAATATTTGTGAAATGCTGTTTAAATTGCCTAAAATATTTTTACAGTAGTTCAATGCAAATGAATTTGTGGAAAAGTTTATTACATAATATGATCAAGCAATTTTAGCCAAAGGGCATTTTTCCAAAGGCTGTGTTATATTCATGTCTTGTTCAGTTTATGGTATTGTGTAACATATTCTCCATAGCTTCTTTTCTTTTTTTttttctttttctttttagacgtggggtctcgctatgttggccaggttggtcttgaactcttggcctcaagcattcctcctgcctcagcttcccaaagtgctaggattacagccatgagccaATAGTAGTAAAATGACTTTTTGTTTTTGTATATGATTTTTACTTTAAGGATTTTTTCCTTCCATACATTTTAATCCAAATTATATGTTTACTGCATTTCTTCTCTGTGTTACTCCAGTGAACACTTAGAAAATACATAAATGAGGGTGTTGTTTAGAAATAAAATTTTGTGACATGAAAATGTATGTAAAACAATGGCAGGTACAGACTAGGTTCTCTGTAAATAGGAAAATGGAGTGTCCTTGTAAATCTTTAGTTCAATTAAAGTACAGGGATACTAGATGGTGAAATGAAGTCTCTTAATATGGAAGTTATCAAAGATCAGATGCTTGAAAATCAAGCGTGTGGAGGTTAACCAGCATCTGGAGAAGTAAATGAAAATACAGTTAATAAGAGAGTCCCCAAGATATTAATTATCATTTATGCAAAGGAGATAATTTCTCTCATTGAATCCCTGGAGGCAATTCAACTTCCTACTGTGGCTGGTATTTCTTTTCTGAGCCAGAGGATCTTACAGCAAAACATGATATTTGTGCAACTTTTGCAATGACAGCTGCCATTTAATATACTCCCCTTAGATTTGTTTCCATTTTAAAAAACTGATATATATTCTTTAATAAGTGATTTATCTTTGCATATATATTTTATATCAATCACATTTAGAGTAAGAATcacagttattaatgctttatgtgtaacaactgaatcatcagctcctgaaataagtattaatgatattctcatttcagaggtgaggaaacttaggacagataagcaaaataaTCAAATTAggctgggcacagtggctcatgcctgtaatcccagcactttgggaggccgaggcggggggatcacctgaggtcaggaattcgagaccagcctgatcaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtgatggcgggcgcctgtaatcccagctattcgggaggctgaggcaggagaattgcttgagcctgggaggcggatgttgcagttagccgagttcccaccattgcactccagtctcagtgacagagcgggactccAtctctctctctctctctctctctctttctctctctctctctctctctctctctctatatatatatatatatatatatatatatatatatatatatttagaaaatgggtagaactatgaagagacatttcactgaagcagttatactgagataaataggcacataaaaagatttccaacatcaccatccatcaAATCTCAGATCTCAGCATATTCTGCTttaaaagactcatcttgtcacatttcagtaagaggcagaatcgagatttgaatccatgttgtctggttgcaaagacaaagcttttAATGATGATGCTACAGTAACAATGCTAGTTATTTTTGTCCTTTACTCACCATCTATACCTATTTTGTTAGTATCTCTTGTAATTTTTAAATGGTTTATCTTCATATATCATTGTGATTGTGGTAACTTTGTATTAAATCTATATTTTTATAGATCAA 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