| Retrocopy Name | EMC3P1 |
|
| Species | Homo sapiens | |
| Coordinates (hg38) | chr16:69443236-69443563 UCSC | |
| Coordinates (T2T) | chr16:75245427-75245754 UCSC | |
| Coordinates (hg19) | chr16:69477139-69477466 UCSC | |
| Strand | - | |
| Parental Sequence | NM_018447.4 | |
| Parental seq. overlap | 279 bp | |
| Parental seq. overlap (%) | 11.1% | |
| Genomic Region |
Intragenic (CYB5B) |
|
| Retrocopy Summary | EMC3P1, located on chr16:69443236-69443563, is a retrocopy of the parental gene EMC3. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | EMC3 |
| Full Name | ER membrane protein complex subunit 3 |
| Also known as | POB|TMEM111 |
| Coordinate | chr3:9962682-10011118 |
| Strand | - |
| Gene summary | Contributes to membrane insertase activity. Involved in protein insertion into ER membrane by stop-transfer membrane-anchor sequence and tail-anchored membrane protein insertion into ER membrane. Is integral component of endoplasmic reticulum membrane. Part of EMC complex. [provided by Alliance of Genome Resources, Apr 2022] |
| Species | Scientific Name | Retrocopy | |
 |
Chimpanzee | Pan troglodytes | EMC3P1 |
 |
Bonobo | Pan paniscus | EMC3P1 |
 |
Gorilla | Gorilla gorilla | EMC3P1 |
 |
Orangutan | Pongo abelii | EMC3P1 |
 |
Gibbon | Nomascus leucogenys | EMC3P1 |
 |
Green monkey | Chlorocebus sabaeus | EMC3P1 |
 |
Crab-eating macaque | Macaca fascicularis | EMC3P1 |
 |
Rhesus | Macaca mulatta | EMC3P1 |
 |
Baboon | Papio anubis | EMC3P1 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | EMC3P1 |
 |
Marmoset | Callithrix jacchus | EMC3P3 |
 |
Mouse lemur | Microcebus murinus | EMC3P1 |
 |
Dolphin | Tursiops truncatus | EMC3P3 |
 |
Horse | Equus caballus | EMC3P1 |
 |
Dog | Canis familiaris | EMC3P1 |
 |
Cat | Felis catus | EMC3P1 |
 |
Pale spear-nosed bat | Phyllostomus discolor | EMC3P1 |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | EMC3P1 |
 |
Mouse | Mus musculus | Without Homology |
 |
Rat | Rattus norvegicus | Without Homology |
 |
Chinese hamster | Cricetulus griseus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Pig | Sus scrofa | Without Homology |
 |
Cow | Bos taurus | Without Homology |
 |
Sheep | Ovis aries | Without Homology |
 |
Panda | Ailuropoda melanoleuca | Without Homology |
 |
Velvety free-tailed bat | Molossus molossus | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
 |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >EMC3P1 |
| GTTTTAAGCCTATGCTGCAGCAAGTTATCAAACTACTCACATTAGATCCACCCTGAATGAGCTCTGCATCCTGGTATTTCCTCAACGTATTTGGGCTTCAGAGAATTTACTGTGATTCTAGGCCAAGATAATGGCAACTGACCAATAAGAAATGAGGCAGGAGCAGATGACCAGAGCAGCCATGGCCATGCCCACAGAAACCAGCAAAGCTTCCAAGACAAAGTAGAAAGTTCTGGAGCTGATGGGTCACCAGTGGACACCAGATGATGTCAAAGAGCTCATGGGCAAAGGCCTTCACTTTGAAGTTATGTTCAAAAAGGAGTTACAA |
| >NM_018447.4 |
| CTTCCAGGCGCTGCTGCCCCAACACAGGCGGGCACTCTCTGCGGGTCCCGCGGCTCCCGCGGCTTCCGGCCCACTCAGCGCCTCCAGAGGCCTCAGGCCCGACGCCGCTCTGACGCCACTGAGGTGCGCCACGACGTGACGTCAACGTTCGCGCCGGAAGTGGAAGACCAGGCAGCCCAGCTGAAGGCAGTAAGCTCGGCTCACAGTCGCAGGAGAGTTCTGGGGTACACGGGCAAAGGGGCTTGAGAAGGCCCGGAGGCGAAGCCGAAGAGAAGCAACTGTGCCCCGGAGAAGAGAAGCTCGCCCATTCCAGACTGGGAACCAGCTTTCAGTGAAGATGGCAGGGCCAGAACTGTTGCTCGACTCCAACATCCGCCTCTGGGTGGTCCTACCCATCGTTATCATCACTTTCTTCGTAGGCATGATCCGCCACTACGTGTCCATCCTGCTGCAGAGCGACAAGAAGCTCACCCAGGAACAAGTATCTGACAGTCAAGTCCTAATTCGAAGCAGAGTCCTCAGGGAAAATGGAAAATACATTCCCAAACAGTCTTTCTTGACACGAAAATATTATTTCAACAACCCAGAGGATGGATTTTTCAAAAAAACTAAACGGAAGGTAGTGCCACCTTCTCCTATGACTGATCCTACTATGTTGACAGACATGATGAAAGGGAATGTAACAAATGTCCTCCCTATGATTCTTATTGGTGGATGGATCAACATGACATTCTCAGGCTTTGTCACAACCAAGGTCCCATTTCCACTGACCCTCCGTTTTAAGCCTATGTTACAGCAAGGAATCGAGCTACTCACATTAGATGCATCCTGGGTGAGTTCTGCATCCTGGTACTTCCTCAATGTATTTGGGCTTCGGAGCATTTACTCTCTGATTCTGGGCCAAGATAATGCCGCTGACCAATCACGAATGATGCAGGAGCAGATGACGGGAGCAGCCATGGCCATGCCCGCAGACACAAACAAAGCTTTCAAGACAGAGTGGGAAGCTTTGGAGCTGACGGATCACCAGTGGGCACTAGATGATGTCGAAGAAGAGCTCATGGCCAAAGACCTCCACTTCGAAGGCATGTTCAAAAAGGAATTACAGACCTCTATTTTTTGAAGACCGAGCAGGGATTAGCTGTGTCAGGAACTTGGAGTTGCACTTAACCTTGTAACTTTGTTTGGAGCTGGCACCTCTTGAAATAAAAAGGAGGATGCACGAGCTGGCAGGCATGCAGCAAGGCTTGTTCTTGTCTGGGCTGGGTTCCCCTTTATGTTTGAAACTAGAGGAAATAGGAGTATGCTGGGCAACTTGTTATTTTTAAAATGTTGTAAATGTTCCTTCTGGTGACTCTAGTAATGAAAGTCAGAGAAAGGGGGAAACCTCAGGCTACTGataatatataaaatcttggccaggcgcagtggctcacgcctgtaatcccaggattttgggaggctgaggcgggtgggtcacgagatcaggagttcaagatcagcctggccaagatggtgaaaccccatctctactaaaaatacaaaaaaaaattagccgggcgtggtggtgggcacctgtaatcccagctacttgggaggctgaggcagagaactgcttaaacctaggaggcggaggatgcagtgagctgacatcgtgccactgcgctccagcctgggcgacagagcaaaactccatctgaaaaaaaaaaaaaaatatatatatatatatatatatatctatCTTAGCAGAAGCCCAGTCTTCGAAGGAAGCATTGTTAATTATAGCTAATGATTATGTGCAGTCAGCCTGACATCTAGCCACAGTAAACTCCTGTTTTCTTGGGATCCAAACACCCTGTGTTTTACCATTAGTTTTGTTAGTATTGTTAACTTTCTTTACACAAGTAAACCATTTCCACTACCAAAGGTTTAGAAACTATGGATGAACAAAATGAATCTCCCTGTTCATTTTGAGCCTACATAGACATAGAGACCAAATATGTCAAAACCTTATTCAAATAAACTCTCTTCAGAGTGAATACCCAGGGTCAGGACAGACTCAGCAAACCTTCTATATCACTTAATTCTGCCCAGTGAAAATCAGtgaccctgaggcactgccagattctaaagtgcctttgggatcatcagagaCTGTCTATAAATAATGCAAAATCTTGATCTGGATGTCAGTGTATCAAATCTTATCAAATCCATTGACAAATCAGTGGTGCTATACTGGAAATGGCTACTCCTTTGGATGAAGGACCTCATTTCCCAGTTGCTTGGAACAAAAGAGAATTTACATATTGCTGTAAGAAGGGAGAGACGGCAGTTGTTGGTAGACACACAGATAAGGGTGCCCAAGAATAATTCTGTCTGGATTAAAGGTCCCAGGGAAGTGACGGTGCCATTTCTGTACCAAGAGGTGAATATAATTTGCATGTTGAGTGCAGTAATTAAGAACAAACGACTCGACTCCACAAATTAAACCGTCCTGTTTTCTCTTC |
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