Retrocopy Name | ZFAND5P1 |
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Species | Homo sapiens | |
Coordinates (hg38) | chr19:42484986-42485725 UCSC | |
Coordinates (T2T) | chr19:45304389-45305128 UCSC | |
Coordinates (hg19) | chr19:42989138-42989877 UCSC | |
Strand | - | |
Parental Sequence | NM_001102421.3 | |
Parental seq. overlap | 728 bp | |
Parental seq. overlap (%) | 12.8% | |
Genomic Region |
Intergenic |
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Retrocopy Summary | ZFAND5P1, located on chr19:42484986-42485725, is a retrocopy of the parental gene ZFAND5. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | ZFAND5 |
Full Name | zinc finger AN1-type containing 5 |
Also known as | ZA20D2|ZFAND5A|ZNF216 |
Coordinate | chr9:72351413-72365208 |
Strand | - |
Gene summary | Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to act upstream of or within several processes, including face development; fibroblast migration; and platelet-derived growth factor receptor signaling pathway. Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022] |
Species | Scientific Name | Retrocopy | |
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Chimpanzee | Pan troglodytes | ZFAND5P1 |
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Bonobo | Pan paniscus | ZFAND5P1 |
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Gorilla | Gorilla gorilla | ZFAND5P1 |
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Orangutan | Pongo abelii | ZFAND5P1 |
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Gibbon | Nomascus leucogenys | Without Homology |
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Green monkey | Chlorocebus sabaeus | Without Homology |
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Crab-eating macaque | Macaca fascicularis | Without Homology |
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Rhesus | Macaca mulatta | Without Homology |
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Baboon | Papio anubis | Without Homology |
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Golden snub-nosed monkey | Rhinopithecus roxellana | Without Homology |
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Marmoset | Callithrix jacchus | Without Homology |
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Mouse lemur | Microcebus murinus | Without Homology |
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Mouse | Mus musculus | Without Homology |
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Rat | Rattus norvegicus | Without Homology |
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Chinese hamster | Cricetulus griseus | Without Homology |
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Rabbit | Oryctolagus cuniculus | Without Homology |
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Pig | Sus scrofa | Without Homology |
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Cow | Bos taurus | Without Homology |
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Sheep | Ovis aries | Without Homology |
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Dolphin | Tursiops truncatus | Without Homology |
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Horse | Equus caballus | Without Homology |
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Dog | Canis familiaris | Without Homology |
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Panda | Ailuropoda melanoleuca | Without Homology |
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Cat | Felis catus | Without Homology |
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Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
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Velvety free-tailed bat | Molossus molossus | Without Homology |
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Greater mouse-eared bat | Myotis myotis | Without Homology |
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Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
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Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
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Egyptian rousette | Rousettus aegyptiacus | Without Homology |
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Sloth | Choloepus didactylus | Without Homology |
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Tasmanian Devil | Sarcophilus harrisii | Without Homology |
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Opossum | Monodelphis domestica | Without Homology |
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Platypus | Ornithorhynchus anatinus | Without Homology |
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Chicken | Gallus gallus | Without Homology |
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Turkey | Meleagris gallopavo | Without Homology |
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Zebra Finch | Taeniopygia guttata | Without Homology |
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Budgerigar | Melopsittacus undulatus | Without Homology |
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Painted Turtle | Chrysemys picta | Without Homology |
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Lizard | Anolis Carolinensis | Without Homology |
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Frog | Xenopus tropicalis | Without Homology |
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Zebrafish | Danio rerio | Without Homology |
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Drosophila | Drosophila melanogaster | Without Homology |
>ZFAND5P1 |
GGCAGAAAAATATGGCTCAGGAGACTAACCAGACCCCGGGGCCCATGCTGTGTAGCACAGGATGTGGCTTTTATGGAAATCCTAGGACAAATGGAATGTGTTCAGTTTGCTACAAAGAACATCTTCAGAGGCAGCAGAATAGTGGCAGAATGAGCCCAATGGGGACAGCTAGTGGTTCCAACAGTCCTACCTCAGATTCTGCATCTGTACAGAGAGCAGACACTAGCTTAAACAACTGTGAAGGTGCTGCTGGCAGCACATCTGAAAAATCAAGAAATGTGCCTGCGGCTGCCTTGCCTGTAACTCAGCAAATGACAGAAATGAGCATTTCAACAGAGGACAAAATAACTACCCCGAAAACAGAGGTGTGAGAGCCAGTTGTCACTCAGCCCAGCCCATCAGTTTTTCAGCCCAGTACTTCTCAGAGTAAAGAAAAAGCTCCTGAATTGCCCAAACCAAAGAAAAACAGATGTTTCATGTGCAGAAAGAAAGTTGGTCTTACAGGTTTGACTGCCGATGTGGAAATTTGTTTTGTGGACTTCACCGTTAACTCTGACAAGCACAACTGTCCGTATGATTACAAAGCAGAAGCTGCAGCAAAAATCAGAAAAGAGAATCCAGTTGTTGTGGCTGAAAAAATTCAGAGAATATAAATTACTTCTTGTGAAGAGACTGAAACTTTGTTTTTATTTTAATACATCATAGGAAAACATTAAAGAGCAGATGCATGGCCATTTTt |
>NM_001102421.3 |
GTTAGTCGGCCGGGACGCGGAGCTGTGTGCATCTCCTACGCGGGCTCGCTCGCTCCCGGGAGCCGCGCAGCTTCCCCGGCGGTGGCAGGAGCGGCGAAGAGCGCCATCAGCGGGCCCTTACGGCCCCAGGCCTCGCGGCGCGCGGTCCGCTCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGGAGGCGTGAGGCGACGACAGGCGAGCGCCTCGAGCAGCGTTAGCCGCTGCGGCCGCCGGtcctccctccacctcctcctcggccccccctcgcttccctcctccCACTTCCCGAGCTCCGGCGTGTCCCGGCCACGCTCGACGCTGCTGCAGGAACAAAGGAAGACCCCGCGGCGGCGGCGGCGCCACCTCCGCCTGCTGCTCCGACCCGCTCCCGGCCCGCGGCGGCGGCACCAGGGCGCCCGGCTCAGCCTTCCCGGAGGCCTCGGCCCGGCCTCATCGTGCCGGCTTCGCGCGCGAACCCGGCTTTCGCATTTGGGACCCTGCAGGCAGAAAAATATGGCTCAGGAGACTAACCAGACCCCGGGGCCCATGCTGTGTAGCACAGGATGTGGCTTTTATGGAAATCCTAGGACAAATGGAATGTGTTCAGTTTGCTACAAAGAACATCTTCAGAGGCAGCAAAATAGTGGCAGAATGAGCCCAATGGGAACAGCTAGTGGTTCCAACAGTCCTACCTCAGATTCTGCATCTGTACAGAGAGCAGACACTAGCTTAAACAACTGTGAAGGTGCTGCTGGCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGGCTGCCTTGCCTGTAACTCAGCAAATGACAGAAATGAGCATTTCAAGAGAGGACAAAATAACTACCCCGAAAACAGAGGTGTCAGAGCCAGTTGTCACTCAGCCCAGTCCATCAGTTTCTCAGCCCAGTACTTCTCAGAGTGAAGAAAAAGCTCCTGAATTGCCCAAACCAAAGAAAAACAGATGTTTCATGTGCAGAAAGAAAGTTGGTCTTACAGGGTTTGACTGCCGATGTGGAAATTTGTTTTGTGGACTTCACCGTTACTCTGACAAGCACAACTGTCCGTATGATTACAAAGCAGAAGCTGCAGCAAAAATCAGAAAAGAGAATCCAGTTGTTGTGGCTGAAAAAATTCAGAGAATATAAATTACTTCTTGTGAAGAGACTGAAACTTTGTTTTTATTTTAATATATCGTAGGAAAACATTAAAGAGCAGATGCATGGCCATTTTTCTTTGATGTTCTCCAGAGTTTTACATTACACTTGTCTGTCTTATAATTGATATTTTAGGATGTTTGGGTGTTTGTTACAGGCAGAATTGGATAGATACAGCCCTACAAATGTATATGCCCTCCCCTGAAAAAAATTGGATGAAAATCTGCACAGCAAAGTGAAACACACAGATAATAGGAACAAAATGTAGTTCCCATGTGCCAAACAAAATAAATGAAATCTCTGCATGTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTATTTTTTTAAAATGGTACACCAGAAAAGGACTGGCAGTCTACTTCTACCATAGTTAAACTTCACCCTCTTTAATTTCACAACATATTCTTTGGAAGCAGGAAGAAATGCTCATAAAGAGGATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATTGGTCATCTAAAGCTGTCAAATAAGACATTCTGTGAAAGGTAAACATCGAAACTGGTTATAAGTAAAACCATCAAGCCAACAACAGGGTCTTGAGATAACCTTTGAAGCTTATTGTACTGGCCTGCACCAGAAGATGTCTGCATTACTCATTGCTAAAAATGTGTAGCACAGAACTGCACTAGGATTAATTTGTTTACAAGAAGAAATTTAAACTCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATTTTAAGTTGCAAAGGTATCTGAATAATTTTTCATGTGCATCTTTTGTCGAATGTTTTGGTTCAAGAAAGAATGTTTAAAGCTTTTTAAAAGACTTCAGTTCTTAATGTAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGACTCTAGTGTTCTTGGGTGTATTGCATGGGCTGCATTATCTACAGCATTGTACAATAACAACTAGAAAAGGCAGTATACTTCACTGATGCTTGTCTGGTAATAATCACTTCTGTGTTATAATGGAAGGTTTTTTGTGATGTATGAAACTTGTGTTTTTTATATATAAATGAGTATAGTTAGTGTTGTGGTAATGCCTGTTTTCATCTGTAAATAGTTAAGTATGTACACGAGGCACTACTTCTGATTTATTGCAATGTTCAGTCCTAGTTTTTACTTTTATTCTTAAAGCATTCAGTTTTGCTTTCAATTTTATGTACCTTAGTTCTGAGTTAGACCTGCAGATGTGTACAGATAGTTCATATTTATGTATTGCACATAATCATGCTATTCAGCATTGATGCTATATTGTATTATGTAAATAATAAAAGCCATGTACAGAGGGAAACTTCACTTGTTCATTGGGTTTTTAAGCCATAGTTGGAGTCCTAAAGGGGGAAAATTAGAAAATGTTACTTTACATGGCTATATAATTTTTTTTCCTTTGCCATCGCTGAACTTGTTCAAGTGATAATCAAGAGATATTAGAAGCATTTGCAGGTATGATACCTGATAGGCAGTTTATTTTTGAAGAATTCAATAGGCACCTTTGGGATTAAAACAATTTTAAAATTTGAGAAAGATGAAATTTGAACAATTATGGCCTACCTCGCTTCTCCATGTTGTAAAAGATGATGTTTTATGACAATTCTGAAGAAGAAAGTAGGTATGACTTAGTTTACAAAAAGAGTTCTGTTTTATTTCTGTTTTGGGTTTGGCTCTAATACAGAGATTCACCCATGGACTTGGTCTCTGTAGCGTTTATGCCAGATCATAAAGAACAAGGGGTGACAGGTACATGTTGACTTTACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATCTGTCAGTTCTTTGCATGCTGCTACTTTTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAGGGTAGTATTTCTCTGAATATGAAAAGTCACAATTGAGTTGAAAATTTAGAAGTTGAAGATTTAGAAGGGCAACTTAATTTTTCAAGTTAAAAATGGAAGTAAGAGTGGTATAGAGAAGGTAAGATGAGCCCTCGGACTCCATCACTCTGAAGGTCTGAGTAGTAGCAAGAGATAGATTTTTGTTTGGccaggctgcagtgcaatggcgtaatcttggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctctgcctcctaagtagctgggatcacaggcaccagccaccacgcccagctaatttttgtatttttaatagagacagtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgagctgcccgcctcggcctcccaaagtgctgggattacaggcgtgaggcaccgcacccggccAATCAGttttttttgttttttttttgtttgtttgttttACAAGAAACATTAAACCAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAATCAGTGTGTAAGGCACCTGAGAGGACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTCCTTTGAAATGTACAGATATTAAGCAATTTAATAATATACCATGTTTCCCTTACATAAGCAGACAAATATTTACACCCCCATGACCTGAAGTTTTGTTAGGCTGTGACCACATGAATTCGCAGTATAAATGGGTGAGTCCTTTTTGAAAACCTCATCTTCAGTGTGCCTGATCTGTAAAACTAGAGCCTCAGGTTTGATCCTAGGTAGGCTTCCCACAACGTGGGGAAAATTAGTTTGTGAGGGAAAGCTGTTTCTGAGcattatggcatagtgattaagatgagggaccctggaaccagcccgtgattttgggcaagttattttaggtccactttggactgcttcatctcttaaatgaagacagcaaccaccttcaggagtgtgaaggtgacaacacttaaaactgtgcctggcacattgtaTTTGCTATTGTCTTAATGTTCTGGAATAATGGTTTCCATAACTTGGGAAGAAAACTTTGAGAACAGGATTGGTTACATCAAGTTGTATAGTGAAAAGATAAAGATTTGTTATTTAAACTTGCAGTTTAAAGTCATTAGAATCATTCTTTTCCGTAAGGCTTTCTTTGCAAGAGATCTGCATTAAATAAAGTTGCTAGGAAATAACTAAAATTGGGGAAATAATCTAATAATAGCAAGATGTTAAGCATACTATTATTGTATTTTGGGGGTTGGTAATAACATTCACATGGATTTATCAATACACACTGAGAAGCAAAGCCTCTCAAGCTGTCCCATATCCTCCATTTCAAAGGCACACATACATTTTAGGTAACTCATAATTTAGAAAGGTTATTTAATCTTTTCCACATGTAAATATTTGAATATGTACAAAGACTTGATTTGACTCTTGTCTGtttttgttttgttttgtttgtttgagacagaggctccgtcgcccaggctggagtaaaatggcatggtctcagctcactgcaagttccgcctcccgggttcacgccattctcctggctcagcctccggagtagttgggactacaggcacccgtcaccacacctggctaatgttttttgttttttgggtttttttgtatttttagtagagagagggtttcaccgtgttagccagggtggtctcgatctcctgacctcatgatccgcccaccccggcctcccaaaatgctgggattacaggtgtgagccactgcgcctggccGACTCTTGTCTGTTTGAATGCAAAGTTCTCAATAGTGGTTTTTGTCCATAAGTATTAACTTATAATTTTGGAGAGTGATAGGTATGGTTGCTGGTTGATTAGCAATAAGATTATGTAGCCTTAAACTAGCTAGAAGAGTTTGCATGGGTGAGGCAACAGGCTGTTAACAAAAAGAAACTGGAAATACAGTTTCCCCTGTTTGTTTCTCCTGTTTGTACAATCTGCTTTAAAAACAAGTGAACATGCACCATGTCAGTCATGGTGAATCGGCCAACAGCCAGCCCTTGCCAGTTGACATCACAGTCTAAGATGGGAAACTGGTACAGATAGACATGAAGAGAGCTTAGCAGTGGTTGAGGTGGTGACTAAATATACAGTCATTGAATAAATACCGTGTAGCAAATGTaaaaaaaaaaaaaaaagtacaacagaatacaaaaGTGCCATTTAATATTTTATAGCTATTTCTATGCACAAGTGCTGGTTTTAAATTTATATAAAAGCAAAGACTGTTTCTGTGTTTTCTTCCAGAGTATTTCTGTTACAGCCATAGAAGTAAAGTTAATAAATGTAAGACTTTTTTTGTTTTGTTTTGTGCCA 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