Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Retrocopy Name MAPK6P2
Plot displaying the genomic locations of a retrocopy (in chr21) and its respective parental gene (in chr15). Each line represents a retrocopy.
Species Homo sapiens
Coordinates (hg38) chr21:22435045-22439040  UCSC
Coordinates (T2T) chr21:20791802-20795797  UCSC
Coordinates (hg19) chr21:23807365-23811360  UCSC
Strand -
Parental Sequence NM_002748.4
Parental seq. overlap 3591 bp
Parental seq. overlap (%) 66.8%
Genomic Region Intergenic
Retrocopy Summary MAPK6P2, located on chr21:22435045-22439040, is a retrocopy of the parental gene MAPK6. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name MAPK6
Full Name mitogen-activated protein kinase 6
Also known as ERK3|HsT17250|PRKM6|p97MAPK
Coordinate chr15:52019219-52067375
Strand +
Gene summary The protein encoded by this gene is a member of the Ser/Thr protein kinase family, and is most closely related to mitogen-activated protein kinases (MAP kinases). MAP kinases also known as extracellular signal-regulated kinases (ERKs), are activated through protein phosphorylation cascades and act as integration points for multiple biochemical signals. This kinase is localized in the nucleus, and has been reported to be activated in fibroblasts upon treatment with serum or phorbol esters. [provided by RefSeq, Jul 2008]

Homology

Species Scientific Name Retrocopy
Chimpanzee Pan troglodytes MAPK6P4
Bonobo Pan paniscus MAPK6P4
Gorilla Gorilla gorilla MAPK6P5
Orangutan Pongo abelii MAPK6P5
Gibbon Nomascus leucogenys MAPK6P3
Green monkey Chlorocebus sabaeus MAPK6P1
Crab-eating macaque Macaca fascicularis MAPK6P1
Rhesus Macaca mulatta MAPK6P1
Baboon Papio anubis LOC101003631P2
Golden snub-nosed monkey Rhinopithecus roxellana MAPK6P5
Marmoset Callithrix jacchus MAPK6P4
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>MAPK6P2
GCTGCTGCCAGTACAGCTGGAGACGTGAGCCCACGCTGGGGGCTGTCCATGGGCCCACACCCTCTCGATGAGTGGAAGTCCCGTTGGATCAGAGTAAGACGGACAGTAGCTTTGGTTGTGATTGTGGTGAGCCGGAGCCACCTGATCACTAACAAAAGACATCTGTTAACCAACAGCCGCCAGGGCTTTCTGGTGAAATATATAGCAACAAAGGAAGAAAAGAAACAAAATGGAAACAGTGCTTACCAGCACCTTAGAACAATGCTGCTCAGGGCCAGTCCAACACTGAATGTGTCTGCACTGTGAGGAGAATGTTCACAGAAGCCTGTTGCGTTGTGTGCATATTTATTCATATTTTTGTTAAATGTTAAATCATTTATCACAGTAAATCTGGGTGCATAGTACATAATTTCATTCCATTTGAGCTTCTTGAGTGTTTTATTTAAATGTCTGCAGAGCTGCTGCCCCTTTCTTGAACTATGAGTACTGCAATCTCTTAAATTCTCAATATGAGTAGAGCTTTTTGAGCTTTATATCTAAGGGGAACTGAACAAGCCTGTTTGGAAAATGCAATGAACATCAAGAAATCATCTTGCTGTGGAAGCATAATTATTTTTCTTCTGCCTGTATAAAAGATCTTTCCTTTTGATGTCAGTTTTCTTCCTTGTTTACACAAGTTCAACAATTCAAAAGGAAAACTTTTTTTTTCTGCTGTAGACGATGACTGTGATAAAAGAGAATCCATCAAGAAAATTCTCCTTACTGATCCCCAGAGTGTCAAAAATGCTCTACATGAAATCAAAATTATTAGAAGATTTGACATCGTGACATTGTGAAAGTGTTTGAAATTCCTAGTACCAGTGGAAGCCAATTAACAAACAATGTGAACTCTCTTACCAAACTTAACAGTATTTACATTTTTCAGAATTACATGGAGACAGACTTGGCTAATATGATGGAGGAGGGCCCTTTACTGGAAAAGCATGCCAGACTTTTCATGTATCAGCTGCTAACGTGGCTTAAGTATTCACTCTGCAAGTGTATTGCCCAGATATCTCAAACCAACTAATCTTTTCATTAATACTGAAGACATGATGCTGAAGATAGGGGACTTTTGTCTTGCACAAATCATGGATCCTCATTATTCCCATAAGGATCATCTCTCTGAAGGACTGGTAACTAAATGGTACAGATCTCCACATCTTTTACATTCTTCTAATAGTTATAGTAAAGCCATTGACATGTGGACTGCAGGCCACATCTTTGCTGAAATGCTGACTGGTAAAACCCTTTTTGCAGGTGCACGTGAACTCGAACAGATGCAGCTGATTTTAGAATCTAGTCCTGTTATACATGAGGAAGATCATCAGGAGCTTCTCAGTGTAATTCCAGTTTACATTAGAAATGAAATGACTGAACCACAGAAACCTTTAACTCAGCTGCTTCAGGGAATTAGCTGAGAAGCACTGGATCTCCTGGAACAAATTTTGACATTTATCCCTACAGATGGGTTAACAGCAGAAGAAGCGCTCTCCCATCATTACATGAGCATATATTATTTTCCAACGGATGAGCCAATTTCAAGTCATCTTTTTCATATTGAAGATGAAGTTTATGATATTTTGCTTATGGATGAAACTCACAGTCACATTTATAACTGGGAAAGGTATGATTGTTAGTTTTCAGTGCATGATTGGCCTATACATAACAACTTTGGTATTGATGAAGTTCTGCTTGACCTGAGAGCTCTGTCTGATATCACTGATGAAGAAGTACGAGTTGATCCCTGAAAATATTTGGATGGACATTCGGAAAAGCATAAAGTATCTGGAGGATCCAATTGCTCTACTGAGCCTTTTTGGCAGTACCCAGATCATCATAAAAACAAATAGGGATTTGAAGTGTAGTCATATTTGTAACTACAAAGCCAGGTCATCATCATATTTAGATAACTTAGTTTGGAGAGCGAGTGAAGTTAACCATTACTATGAACCCAAGGTTATTATAGATATTTCCAATCGGAAAGAATAAAGCAGAGAAAAATCTGATAAGAAAGGCAAGTGAAAATGTGAAAGGAATGGATTGGTTAAAGCCCAGATAGCGCTTGAGGAAGCCTCACAGCAACTGGTTGAAAAACAAAGGGAAAAAAATCAGGGGTTTGATTTTGATTCCTTTATTGCAGAAACTACTCAACCTAGTTCACAACATGAGCCTACTGATGTTGTTGAGAAATGAAATAACTCGAATAGGTCAAGGTCCCAACTAGAAATGAAAAATTTGATAACAAAGACAGTAAGCCAAGAAAAACAGAAAAAAGGAATGGCAAATTTGGCTCAGTTAGAAGTCTTGTACCAATCTTCTTGGGACAGCCAGTTTGTGAGTGGTGGGGAGAACTATTTTATCACAAATTAGTTTTGTTGTGAGGTAAGGAAGTGTGAAGGAGTTGAGGAGGACGACATTTACACTAGTTACTTAGACAAGTTATTTAACAGGAAAGAAGATACTGAAATACTAGAAACTGAGCTAGTAGAGGATGGGAAGCTTGGGGAGAGAGGAAATGAAGGATTTCTGAACAACAGTTTGGAGTTCCTCTTTAGCAAGCACCTCGAGTCCGTGGGCGTCCTGCAGCTTCGCAGTCCAGTTGGGTCACTACTTAAGTCAATACAGGCCACATTACCACCTTCTGCTATGGAATCTTCCCCTCAAATTCCTCATAAAACCTGCAGCAGCATTTTAAAACATGTGAACTAAAGCACTCAGCAAACATTTATCTTTGCATTCTTCATGAAATGTGTTTTGCCTTTATTTTATCACTAGTGTTTAAGTCATTTTTTACTTGAATCAGATGGTGTAATTTAGTAAGGATTAGCTCTTGGTTTTTAAAATCCAGACCTTATTTTCTACATATGAGGTAGTTTTCATTTTAACTGGCATGTCGTTTGCACACAAAAATAAGCAAAGAGCAAAATAATGCAATGCTAGAGGAGGCAAAAGAAATGCACTAAGACAAGTAAAAAACATCCTCTCGTAGAACAATGATCCGTTTTATAGGAAACAAATCTTACCTTGAAATTTACGCAGTGAGACTCTACATAATTGCCTGAAAATATCTATTTTTTCTAAAACATTTTTTATTCATGAATATTTTTTAAGTTTTTCACACTGTACACATTTCTTAAAACATATGATACCAGTAACAACTGAAAATGACTGCTGAATTGAGTACACATGTGTTATCTAGCTCAAGATAACAGAAGTATGTGGCAAAACATATACCACTCATAGTGCTTCACAATATGCACATCTATTTAGCCAGCATTTATTTTAGTAAACTATTCTTAATAAGACTCATTTACTGTTTATGAATATTCTGGTATGCATTCTTTATAGTGAAGTGTTAATATATCACATCTTATTTATTTTAGCAAATCAGTATATTTTCTGTATTTAATTATAAAAAGTAACTTAGTTTTTAAAATTTATTTGCAAATACACTTACTCCATCTGGCACTACAGCTTGTTGCCTACCTAACTGAATATATAATGTTAGCTCATCTTAAGCATGTCCATGTACTTAATTTACTTACGTGTTTATTTTAAGTAAACGATCACTGTATATAGGAATTTGTCTATGAAGAAATCACTGTATATAGGAATTTATCTATAAAGAAAAATTAGGAATTACTTTATTATAAATTACTCCTAGAAGTCTTGTGTTTATTTAAAAAGCTAATGTTAAAATTGTGTGTGTGGAAATAATTAAAGTCCATCATTATTGTAGTTTAAAAGTTGTATATGATACGACATTTTGATTTTACTGTATGTTTTTACTGAATGGTCTATTCCCCATCCCAAGGCAAACATGAATAAAATAAGATTAAATGTAGCATGTGGTATCACAGTCTCTTAGAATTTGTTTTGTCTATTTCATTGTATTGAATAGTCTGTATCTTTTGTTATCCTGTTTGAGGAAAAAGGACAAATAAAACATGGCCC
>NM_002748.4
CTTCCTCGCCCTCTCTCGCGGGTCGGGGTTACATGGCGGCGACTGCGGCAAAGCGAGAGCCTCGGAGACGCCGCTGCCGCCAGCACAGCCGGAGACCTGAGCCGACACTGGGGGCAGTCCGCGAGCCCCGCACTCTCTCGATGAGTCGGAGAAGTCCCGTTGTATCAGAGTAAGATGGACGGTAGCTTTGATTGTGATTGTGGTGAGCTGGAGCCACCTGATCACTAACAAAAGACATCTTCTGTTAACCAACAGCCGCCAGGGCTTCCTGTTGAAATAAATATATAGCAACAAAGGAAAAAAAGAAGCAAAACGGAAATAGTGCTTACCAGCACCTTAGAATGATGCTGCTCAGGACCAGTCCAACACTGAATGTATCTGCACTGTGAGGAGAATGTTCATAGAAGCCTGTTGTGTGCATATTTATTCACATTTTTGTTAAATGTTAAATCGTTTAGCACGGTAATCTGAGTGCACAGTATGTCATTTCATTCCGTTTGAGTTTCTTGTTTTCGTTAAATGTCTGCAGAGTTGCTGCCCCTTTCTTGAACTATGAGTACTGCAATCTTTTTAATTCTCAATATGAATAGAGCTTTTTGAGCTTTAAATCTAAGGGGAACTCGACAGGCCTGTTTGGCATATGCAATGAACATCAAGAAACCATCTTGCTGTGGAAGCATAATTATTTTTCTTCTCCCTTTTTGAAAGATCTTTCCTTTTGATGCCAGTTTTCTTCCTTGTTTACACAAGTTCAATTTGAAAGGAAAAGGCAATAGTAAGGGTTTCAAAATGGCAGAGAAATTTGAAAGTCTCATGAACATTCATGGTTTTGATCTGGGTTCTAGGTATATGGACTTAAAACCATTGGGTTGTGGAGGCAATGGCTTGGTTTTTTCTGCTGTAGACAATGACTGTGACAAAAGAGTAGCCATCAAGAAAATTGTCCTTACTGATCCCCAGAGTGTCAAACATGCTCTACGTGAAATCAAAATTATTAGAAGACTTGACCATGATAACATTGTGAAAGTGTTTGAGATTCTTGGTCCCAGTGGAAGCCAATTAACAGACGATGTGGGCTCTCTTACGGAACTGAACAGTGTTTACATTGTTCAGGAGTACATGGAGACAGACTTGGCTAATGTGCTGGAGCAGGGCCCTTTACTGGAAGAGCATGCCAGGCTTTTCATGTATCAGCTGCTACGGGGGCTCAAGTATATTCACTCTGCAAATGTACTGCACAGAGATCTCAAACCAGCTAATCTTTTCATTAATACGGAAGACTTGGTGCTGAAGATAGGTGACTTTGGTCTTGCACGGATCATGGATCCTCATTATTCCCATAAGGGTCATCTTTCTGAAGGATTGGTTACTAAATGGTACAGATCTCCACGTCTTTTACTTTCTCCTAATAATTATACTAAAGCCATTGACATGTGGGCTGCAGGCTGCATCTTTGCTGAAATGCTGACTGGTAAAACCCTTTTTGCAGGTGCACATGAACTTGAACAGATGCAGCTGATTTTAGAATCTATTCCTGTTGTACATGAGGAAGATCGTCAGGAGCTTCTCAGCGTAATTCCAGTTTACATTAGAAATGACATGACTGAGCCACACAAACCTTTAACTCAGCTGCTTCCAGGAATTAGTCGAGAAGCACTGGATTTCCTGGAACAAATTTTGACATTTAGCCCCATGGATCGGTTAACAGCAGAAGAAGCACTCTCCCATCCTTACATGAGCATATATTCTTTTCCAATGGATGAGCCAATTTCAAGCCATCCTTTTCATATTGAAGATGAAGTTGATGATATTTTGCTTATGGATGAAACTCACAGTCACATTTATAACTGGGAAAGGTATCATGATTGTCAGTTTTCAGAGCATGATTGGCCTGTACATAACAACTTTGATATTGATGAAGTTCAGCTTGATCCAAGAGCTCTGTCCGATGTCACTGATGAAGAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGATCGGGAAAAGTATCTGGAGGATCCTGCTTTTGATACCAATTACTCTACTGAGCCTTGTTGGCAATACTCAGATCATCATGAAAACAAATATTGTGATCTGGAGTGTAGCCATACTTGTAACTACAAAACGAGGTCATCATCATATTTAGATAACTTAGTTTGGAGAGAGAGTGAAGTTAACCATTACTATGAACCCAAGCTTATTATAGATCTTTCCAATTGGAAAGAACAAAGCAAAGAAAAATCTGATAAGAAAGGCAAATCAAAATGTGAAAGGAATGGATTGGTTAAAGCCCAGATAGCGCTAGAGGAAGCATCACAGCAACTGGCTGGAAAAGAAAGGGAAAAGAATCAGGGATTTGATTTTGATTCCTTTATTGCAGGAACTATTCAGCTTAGTTCCCAGCATGAGCCTACTGATGTTGTTGATAAATTAAATGACTTGAATAGCTCAGTGTCCCAACTAGAATTGAAAAGTTTGATATCAAAGTCAGTAAGCCAAGAAAAACAGGAAAAAGGAATGGCAAATCTGGCTCAATTAGAAGCCTTGTACCAGTCTTCTTGGGACAGCCAGTTTGTGAGTGGTGGGGAGGACTGTTTTTTCATAAATCAGTTTTGTGAGGTAAGGAAGGATGAACAAGTTGAGAAGGAAAACACTTACACTAGTTACTTGGACAAGTTCTTTAGCAGGAAAGAAGATACTGAAATGCTAGAAACTGAGCCAGTAGAGGATGGGAAGCTTGGGGAGAGAGGACATGAGGAAGGATTTCTGAACAACAGTGGGGAGTTCCTCTTTAACAAGCAGCTCGAGTCCATAGGCATCCCACAGTTTCACAGTCCAGTTGGGTCACCACTTAAGTCAATACAGGCCACATTAACACCTTCTGCTATGAAATCTTCCCCTCAAATTCCTCATCAAACATACAGCAGCATTCTGAAACATCTGAACTAAAACACTCAGCAGACATTTATCTTTGTATTCTTCATGAAATGTGTTTTGTCTTTTTTTATTACTAGTGTTTAAGTCATTTTTTACTTGAATCAGATGGTGTCATTTAGTAAGGATTTTATGAGTTCTTGTTTTTTAAAATCCAGACTTTCTTTTTCTACATGTGAGATAGTTTTCATTTTAACTGGCATGTCATTTGCACACAAAAATAAAGACTAGAGCAAAATAATGCAACGCAGGAGGAGAAAAGAAATGCACTAAGACAAGAACATTCTCTCATAGAAcattgatctgttttacaggaaacaaaccttgccttgaaatttacacagtgagactgtacataattgcatgaaaatagctattTTTTTCCTAAGACATTTTTCATTCATGAATATTTTCAAGTTTTTCATACTGTACACATTTCTTAAAACACATGATACCAGCAGCAACTGAAAATGAATGCCGAATTTGGTACACATGTGTTATCTACCTCAAGGTAACAAGAGTATGTGGCAAAACATATACCACCCATAGTGCTTCACAAAATGCACTTCTATTTAGCCAGCGTTTATTGTAGTAAACTATTCTTAATAAAACTCACTCACTGTTTATAAATGTTCTGGTATGCATTCTTTATAGTGAAGTGTTAATACATCACATCTTATTTATTTTAGCAAATCAGTATATTTTCTGTATTTAATTATAAAAAATTAACTTAGTTTTTAAAATTTATTTGCAAATATACTTTACTTTTTCCATTTGGCACTATGGTTTGTTGCCTACCTAGCTGCATCTATAATGTCAGCTTATCCTAAGGCTGTCCACGTACTTAATTTACTTAAGTGTTCATTTTAAGTAACGTGCTCACTGTGTATAGGAATTTGTATTTTGGAGGTGCTTGATCTATCTACAAAGAAAAATTAATTAGGAATTACTTTATTATAAAATGCTCCTAGAAGTCTTAATTGTGTTTATTTTTTAAAAAAACAAATGTTAGACTTGTGTGCATGGAAGTAATTAAGGTACATCATTATTGTAGTTTGAAAGTTGTACATGATAAGACATTTTGTTTTTACTGTATGTTTTTACTGAATGATCTATTCCCCATCCCAAGGCAAGCATGAATAAAATTAGGTTAAACGTAGCATGTGGCATCGCAGTCTCTTAGAATTTGTTTCATCTATTTTATTTTATTGAATACTGTCTGTATCTTTGGTTATCCTGTTTGAAGAAAAAGGACAAATAAAACATGGCCAGCAAATACAGCTCCTGTTTCACTCTTGGGTTAATGAAAATTTTCTGCTAGAATGAAAATTACTACCAGAATCACTTTGAATTATGGCCATAAATTGCTAGTCTGAAAGGCTGAGAAGGTTCAAGTCTTTTGACTTAAACCATCACATATTAGAATGGAATAAAGCTTTATAATATTTCAAAACTGTTAGGTAAAATGTGTAGTTGAAACTTTGAACTGTGCAGTCAGAAAACTTGAGATTTGCTCTGTAATACATCTTTGCGTAAGAACTTACCCTTTTACCTATCCAGCTACAAAACCATCCTCTTCACCTCACTTTTCTTTCATCCTTGTTTTGTACAACACCAATTCTATTAATATCTGCCCACCTACCTTCTCAACAACTCCATCCTCTTCACCTCACTTTTCTTTCATCCTTGTTTTGTACAACACCAATTCTATTAATATCTGCCCACCTACCTTCTCAACAACTGACTTCATCTGGATTCACAAAGCCATATATATACACgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATATATATTCATTTATTTATTTTCTGGTTGAATACTGTCACGTTATTAATTTAAACATACTCAAATTACCTTAAGAGGACAAGCTCTGAAGTGCAGTCATGAGAATTGATTTGTGGGGAAAAAAAAAATGGGACACTTTTAGTTGGAGCTGGGTGGGGTGACAAGTGCAGAGGCTTTGAGTGTCATGAGAGCATCAGACAGGATGTAAAGGAAGCAACGGGCAGCAGACATTGGTCCCTGATCCTCCATTATAACCAATTTTTTGCAAACGTATGTTGATTTTGAGAATAATTAGCTTTGACTCTAAAATGCTGTCTTCCCTGAAGGAGACCTAGGATTTTTCTTACTGGGAAACTTGGCTCCTGGACTTAATCCACATTCGTTAAACTGTCACCTTGGCAGTTTAGTGGCCATCTACACAATGATCTGACTTGTTGGCATTAAAAAGTCCAAACATAGTCATCAAAGGAAGAAGAAAGTAAAACTGAAACCCCTTATATAAAATATGCTTGCTTTAGGGTGACCCAGGCTGAGTACTAAGTTGTAAAGTCAATTTCCAATAAAAATTTTATGTGCCAATTA

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