| Retrocopy Name | ISCA2P1 |
|
| Species | Homo sapiens | |
| Coordinates (hg38) | chr22:26644521-26645229 UCSC | |
| Coordinates (T2T) | chr22:27107120-27107828 UCSC | |
| Coordinates (hg19) | chr22:27040485-27041193 UCSC | |
| Strand | - | |
| Parental Sequence | NM_194279.4 | |
| Parental seq. overlap | 665 bp | |
| Parental seq. overlap (%) | 25.7% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | ISCA2P1, located on chr22:26644521-26645229, is a retrocopy of the parental gene ISCA2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | ISCA2 |
| Full Name | iron-sulfur cluster assembly 2 |
| Also known as | HBLD1|ISA2|MMDS4|c14_5557 |
| Coordinate | chr14:74493765-74497106 |
| Strand | + |
| Gene summary | The protein encoded by this gene is an A-type iron-sulfur cluster (ISC) protein found in mitochondria. The encoded protein appears to be involved in the maturation of mitochondrial iron-sulfur proteins. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2012] |
| Species | Scientific Name | Retrocopy | |
 |
Chimpanzee | Pan troglodytes | ISCA2P1 |
 |
Bonobo | Pan paniscus | ISCA2P1 |
 |
Gorilla | Gorilla gorilla | ISCA2P1 |
 |
Orangutan | Pongo abelii | ISCA2P1 |
 |
Gibbon | Nomascus leucogenys | ISCA2P1 |
 |
Green monkey | Chlorocebus sabaeus | ISCA2P1 |
 |
Crab-eating macaque | Macaca fascicularis | ISCA2P1 |
 |
Baboon | Papio anubis | ISCA2P1 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | ISCA2P1 |
 |
Rhesus | Macaca mulatta | Without Homology |
 |
Marmoset | Callithrix jacchus | Without Homology |
 |
Mouse lemur | Microcebus murinus | Without Homology |
 |
Mouse | Mus musculus | Without Homology |
 |
Rat | Rattus norvegicus | Without Homology |
 |
Chinese hamster | Cricetulus griseus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Pig | Sus scrofa | Without Homology |
 |
Cow | Bos taurus | Without Homology |
 |
Sheep | Ovis aries | Without Homology |
 |
Dolphin | Tursiops truncatus | Without Homology |
 |
Horse | Equus caballus | Without Homology |
 |
Dog | Canis familiaris | Without Homology |
 |
Panda | Ailuropoda melanoleuca | Without Homology |
 |
Cat | Felis catus | Without Homology |
 |
Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
 |
Velvety free-tailed bat | Molossus molossus | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
 |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >ISCA2P1 |
| TCCAGCCCCGAGGCCGGCGACGGGCAGATCCGCCTCACGGACAGCTGCGTCCAGAGGCTTCTGGAAATCACCAAAGGATCAGAATTCCTCAGGCTGCAGGTGGAGGGAGGTAGATGCTCCGGATTCCAGTACAGATGTTCACTGGATACAGTTATCAACCCCGACGACGGTATTTGAACAGGGTGGGGCAAGAGTGGTGGTTGACTCTGATAGCTTAGCCTTCGCGAAAGGGGCCTAGGTGGACTTCAGCCAAGAACTGATCCGAAGCTCATTTCAAGTGTCAAACAATCCTCAAGCACAGCAAGGCTGCTCCTGTGGGTCATCCTTCTCTGTCAAACTTTGATGCGATGACAGGTGACTCTGAGATTGTCACCAGTTGTACCAATTTGAGGAACGTGGAATTAGTAGAATTCTAGAAGTTTCCTTCTAATCATGTCCCTCTCCATTTTATTTCCCACAGTCCAGGAGTATTGTGTTATGCCACTATTATTTTCAGAACGGGAAGATTTTACTCTTGGCTTAATTTTTCCCTCCAACTCCCCTCAGTGCTAAGGCTGAGCCTCCAGATGCTGTTACCTCAGATTTAATCACTAGCTGAAACTCCATATAATCTGTAGAGCCTCCACAGCTCTAAAATTTGGAATTAACTTCTCTGGCCTTAAGAGCTGCTTGTACATATGTGGATAGCTATGTATAAAAGCTTCATTTA |
| >NM_194279.4 |
| GTGGAGGAAGATGGCTGCCGCCTGGGGGTCGTCCCTAACGGCCGCGACGCAGAGAGCGGTCACTCCCTGGCCGAGGGGCAGGCTCCTCACGGCCTCCCTGGGACCCCAGGCGCGTCGGGAGGCGTCGTCCTCCAGCCCCGAGGCCGGCGAAGGGCAGATCCGCCTCACAGACAGTTGCGTCCAGAGGCTTTTGGAAATCACCGAAGGGTCAGAATTCCTCAGGCTGCAAGTGGAGGGAGGTGGATGCTCCGGATTCCAATACAAATTTTCACTGGATACAGTTATCAACCCCGACGACAGGGTATTTGAACAGGGTGGGGCAAGAGTGGTGGTTGACTCTGATAGCTTGGCCTTCGTGAAAGGGGCCCAGGTGGACTTCAGCCAAGAACTGATCCGAAGCTCATTTCAAGTGTTGAACAATCCTCAAGCACAGCAAGGCTGCTCCTGTGGGTCATCTTTCTCTATCAAACTTTGATGTGATGACTGGTGACTCTGGGATTGTCACCAGTTGTACCAATTTGAAGAACCTGGAATTAGTAGAATTCTAGAAGTTTACTTCTAATCATGTCCCTCTCAATTTTATTTCCCGCAGTCCAGGAGTGTTATGTTTTGCCACTATTATTTTCAGAATGTGAAGATTTTACTCTTGGCTTAATTTTTCCCTCCACTCAGTGCTAAGGCTGAGCCTCCAGATGCTGTTACCTCAGATTTAATCACTGGTTGAAACTCCGTATAATCTGTAGAGCCTCCATGGCTCTAAAATTTGGAATTAACTTCTCTTGCCTTAAGAGCTGCTTGTACATATGTGGATAGCTATGTATAAAAGCTTCATTTTAAAGAAGGTTCTTATTGTGTTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGAGAAAAGTAAATGAAATGTTCTCTTTTTCACTTCACCCTGCCAGAATGTGCCACTTGACTTATCTTTATTGTCTATGCAACCCATTTGCCACTTCCTGTTTGATAGGACAGATACATTTTACTCTCATGCTCGTGGATCTGCTATGAGTCATAAAACCAAGAGCCCGTTACCCAGAAAACTTGGACCAAACCCTCACTGATAGTGAATTATTTCAAAAATAGCCTCCCTACTCATACAGACATTTTAAGATTCTGTGACAATTTAATGACTGAATCTTTTTAGGATATGTTGCTTTACCTGCCTTCTGTTGTAAAATGGCTCTGGTCTCATGCACAGCAGGAAGTGATCCCTTTATTGTTATAGGTAATAGATTCTTGGGAACCTTTTTTTAGATTgggttaccagatgaaatgtaggatgcccagttaaatttgaatttcaggtaaataattttttagtatgcatatgtctcaaatattgcatatactaaaaattactatttgaaattcaaatttaactcatatttttatttgctgaccttggcaactctGCTTTAGGGTCACCAAACAGCTTTTAAAATCACAAATTCTAGTGAATTAAAGTACTTGTGTAGGTGTGGCACTTAAATAGGCTTCGGAGCTTGAAATAATCCTGTTAGAGTACTGTGGAGCTGTGTGGACAGACAGTGAAAGAAATCTACCACCATCACCACACCGAATGATTTATTAATACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAAATCCATCTTTTGCTTGGGAGCCTAGAAGTTTGTTACAGTAAAGACTTGCATTTCTGCACTGGATTGGAATTAAGGTCATTTAGTAAGAATTTACTATTTAAAAAAATGGAAATAGAGTTTAGAAAATATCTGAGACAGAAACTTAGATACATTTCCAACATGGCAAAACCTAGGACTTAGAGAAAACAAACCTATCATGCGGTTAGAGGAGAGAAGGGGACACTCAGAAACCTGAGCACATTTCTTAGAGCTGGTGGAAGGAGGCAGAAAGCAGCATACCATGGGAGCATCTGTGTGCACACATGACCAAGACAGTGCCGCCAGTACCTGCGCCTGATAGGGTTTCAGTTCAGACTACCTGTCCTTTCATCCTCCTTAAAAAGATTTTGCTACATTTTAAACATTAGAATATATTCTTTAAGAATATTTTTGTGGGTTATTTATTGATTTTGTGGTTTTAAAACTCTTGAGCACGAGCAGAACAGCTTTTGTTGCTAAATCAATCAAATTACAGTGGTGCACTAGACAGAAACAGTCCCTTAGAATGCAGCTTATATGTGAGTATCTACTGTTAATGGGAGAATTGGAATTTTATGTTTAGAAAAAGGCAGATTTGGggctgggcacggtggctcacgcctgtgatcccagcactttgggaggccaaagcaggcagatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaaccccatctctactaaaaatacaaaaattaactgcgtggtggacacctgtaatcccagctactcgggagactgaggcaagagaatcacttgaacccaggaggtggagattgcagtgagccaagattgcaccactggactccagcctgggtggcagagtgagactctg |
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