Retrocopy Name | ING2P1 |
|
Species | Homo sapiens | |
Coordinates (hg38) | chr5:55832570-55832816 UCSC | |
Coordinates (T2T) | chr5:56660863-56661109 UCSC | |
Coordinates (hg19) | chr5:55128398-55128644 UCSC | |
Strand | + | |
Parental Sequence | NM_001291959.2 | |
Parental seq. overlap | 232 bp | |
Parental seq. overlap (%) | 9.8% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | ING2P1, located on chr5:55832570-55832816, is a retrocopy of the parental gene ING2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | ING2 |
Full Name | inhibitor of growth family member 2 |
Also known as | ING1L|p33ING2 |
Coordinate | chr4:183505058-183512429 |
Strand | + |
Gene summary | This gene is a member of the inhibitor of growth (ING) family. Members of the ING family associate with and modulate the activity of histone acetyltransferase (HAT) and histone deacetylase (HDAC) complexes and function in DNA repair and apoptosis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2014] |
Species | Scientific Name | Retrocopy | |
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Chimpanzee | Pan troglodytes | ING2P1 |
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Bonobo | Pan paniscus | ING2P1 |
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Orangutan | Pongo abelii | ING2P1 |
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Gibbon | Nomascus leucogenys | ING2P2 |
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Gorilla | Gorilla gorilla | Without Homology |
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Green monkey | Chlorocebus sabaeus | Without Homology |
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Crab-eating macaque | Macaca fascicularis | Without Homology |
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Rhesus | Macaca mulatta | Without Homology |
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Baboon | Papio anubis | Without Homology |
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Golden snub-nosed monkey | Rhinopithecus roxellana | Without Homology |
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Marmoset | Callithrix jacchus | Without Homology |
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Mouse lemur | Microcebus murinus | Without Homology |
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Mouse | Mus musculus | Without Homology |
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Rat | Rattus norvegicus | Without Homology |
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Chinese hamster | Cricetulus griseus | Without Homology |
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Rabbit | Oryctolagus cuniculus | Without Homology |
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Pig | Sus scrofa | Without Homology |
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Cow | Bos taurus | Without Homology |
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Sheep | Ovis aries | Without Homology |
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Dolphin | Tursiops truncatus | Without Homology |
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Horse | Equus caballus | Without Homology |
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Dog | Canis familiaris | Without Homology |
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Panda | Ailuropoda melanoleuca | Without Homology |
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Cat | Felis catus | Without Homology |
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Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
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Velvety free-tailed bat | Molossus molossus | Without Homology |
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Greater mouse-eared bat | Myotis myotis | Without Homology |
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Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
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Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
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Egyptian rousette | Rousettus aegyptiacus | Without Homology |
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Sloth | Choloepus didactylus | Without Homology |
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Tasmanian Devil | Sarcophilus harrisii | Without Homology |
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Opossum | Monodelphis domestica | Without Homology |
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Platypus | Ornithorhynchus anatinus | Without Homology |
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Chicken | Gallus gallus | Without Homology |
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Turkey | Meleagris gallopavo | Without Homology |
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Zebra Finch | Taeniopygia guttata | Without Homology |
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Budgerigar | Melopsittacus undulatus | Without Homology |
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Painted Turtle | Chrysemys picta | Without Homology |
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Lizard | Anolis Carolinensis | Without Homology |
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Frog | Xenopus tropicalis | Without Homology |
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Zebrafish | Danio rerio | Without Homology |
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Drosophila | Drosophila melanogaster | Without Homology |
>ING2P1 |
aGGCCTGGAAAATGGCTGGTCGCGAGAGGGGCGGCCGGTTGCTGGGGAGGGAGTCGGGGCTGTGTGGGGGCATTGGTTCAGCCCCAGCGGAGTCCGAGTCGGGGTTTGCAGCATGTTTTGTGGTGATGTTTCCAATCTCTTTCCCAACCAATGGATCAGGACGGCGATCAGTAGCTTGGACGGTCGCGGATCCTGGCTCCGCAAACGTTAAAGGAAATTGATGATGTCTATGAAAAATATAAGAAAG |
>NM_001291959.2 |
GCGCGTTCCCGCGGGCCTGGAAAATGGCTGGTCGCGAGAGGGGCGGTGGCGAGCTGGCTGCTGGGGAGGGAGTCGGGGCTGTGCGGGGGCGTTGGTTCGGCCCCAGCGGAGTCCGAATCGGGGTTTGCAGCATGTTTTGCGGTGATGTTTCCAACCTCTTTCCCAGTCAATGGATCAGGACGGCGATCAGCAGCTCGGACCGTCGCGGATCCTGGCTCCGCAAACGTTAAAGGAAATTGATGATGTCTACGAAAAATATAAGAAAGAAGATGATTTAAACCAGAAGAAACGTCTACAGCAGCTTCTCCAGAGAGCACTAATTAATAGTCAAGAATTGGGAGATGAAAAAATACAGATTGTTACACAAATGCTCGAATTGGTGGAAAATCGGGCAAGACAAATGGAGTTACACTCACAGTGTTTCCAAGATCCTGCTGAAAGTGAACGAGCCTCAGATAAAGCAAAGATGGATTCCAGCCAACCAGAAAGATCTTCAAGAAGACCCCGCAGGCAGCGGACCAGTGAAAGCCGTGATTTATGTCACATGGCAAATGGGATTGAAGACTGTGATGATCAGCCACCTAAAGAAAAGAAATCCAAGTCAGCAAAGAAAAAGAAACGCTCCAAGGCCAAGCAGGAAAGGGAAGCTTCACCTGTTGAGTTTGCAATAGATCCTAATGAACCTACATACTGCTTATGCAACCAAGTGTCTTATGGGGAGATGATAGGATGTGACAATGAACAGTGTCCAATTGAATGGTTTCACTTTTCATGTGTTTCACTTACCTATAAACCAAAGGGGAAATGGTATTGCCCAAAGTGCAGGGGAGATAATGAGAAAACAATGGACAAAAGTACTGAAAAGACAAAAAAGGATAGAAGATCGAGGTAGTAAAGGCCATCCACATTTTAAAGGGTTATTTGTCTTTTATATAATTCGTTTGCTTTCAGAAAATGTTTTAGGGTAAATGCATAAGACTATGCAATAATTTTTAATCATTAGTATTAATGGTGTATTAAAAGTTGTTGTACTTTGTCTGTGACCTTAATTTTCTGCACTGAGTTACCAAATATTTCCAACCAGGTAGTCTTCAGATCACCTGATGAAAGGAGCAGGGAACAGGAAGAGGGTGGTGTAAACATTATAAAAATTTCACAAACCATGCCTATTTCATTTTCACTTAAAACTGCAATGTTATTTTTTGGGTAAACACAAAAGTTTCACTAGCATTTTAGTTATACATGCTTAAAAAAATGTTAGATGTAGTGGGATTTCTCTTAAGCATCAAATGATCTTGGGTACTTTAAAATACAGACACTATGCCATTTGAGCTGCTTTTTCCCTAGTCCTATTTATACGTTGGCTTGTTCATCTCTAGTCTTCTAGGAGTTTAAGGAACTGGAGATAAGAGTAATTTGGGATTCCATGTGGAATAATGTGCTCTTATGAGAGTACGTGCTGCTGTCTTTTGCTTAGTAGCATTTTGATCCACTGTCAGTAGCCCATTTGTCAATGCCTTGCTGCTGCTTTGTAGATATACTTAGTCTAGTGCTTAATAAGGGAGTTGTTTTGTGTTTTCTTTTAATTGGGACAGGTAAGAGTAGTTAGCATACCAAAAATATACATTGGCTTACATTGGCAAACTTTGGGTTATATAGTATCACGGCTCAAGGTTGAACAATTTAAAAATACATCTTAATTAATAGTATTTTCCATGTGACCTGCTGCCAGGATGCGTAGCCACAGGCCTATCAGTGGAAAGGGGCATATAGTAGTCTTTAAATATTGCCTTTATGTCAGAGAGTTGTTTTAAATGGTTTTGCTAGTGGTTATTGTTCATTTCTGTCCCAATCAGTGACTATTTTAAATAATAGTGTATTTACTGTCTTAACTTCTAGTATTGGTGCTGTTTGATGTTTTCACATTTAATTAACTTATTTCATCATCATAATGCAATTAATGTATTTGTAAATTGAATTTTCCAAGATTCTGATATTTGAAGGGTAAGCATCTTGATGGATATATGTCCATATGTTTAGAGAAGGTTTTGGTTTTGGGGGCAGCAGATTGACTAGTTCTTTAAATCTGTGTGTAACGTATGTTTTATTCCTCATTTCTTCCTAATCTGATGATCTTGATTCTTTTTGATTAACATGAAAAATCCTGTCTGCTTGTTTTGGGAAAAAAAAATGCTTTTTTTCTCTTctagctctcctgtgtgacttttaggcatgtcatttcaccttgtctgggtgtcaggtcattcacctgtaaaatgagttggcttaaatatctccgagattccttGGAAATTTCTACTATTTGCACTATAGTGAGGATTTTAATAATGACATGACTTCTCTTTTCA |
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