Retrocopy Name | DOCK1P1 |
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Species | Homo sapiens | |
Coordinates (hg38) | chr7:122676580-122676816 UCSC | |
Coordinates (T2T) | chr7:123992589-123992825 UCSC | |
Coordinates (hg19) | chr7:122316634-122316870 UCSC | |
Strand | + | |
Parental Sequence | XM_017015817.1 | |
Parental seq. overlap | 223 bp | |
Parental seq. overlap (%) | 3.2% | |
Genomic Region |
Intragenic (CADPS2) |
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Retrocopy Summary | DOCK1P1, located on chr7:122676580-122676816, is a retrocopy of the parental gene DOCK1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | DOCK1 |
Full Name | dedicator of cytokinesis 1 |
Also known as | DOCK180|ced5 |
Coordinate | chr10:126905428-127452517 |
Strand | + |
Gene summary | This gene encodes a member of the dedicator of cytokinesis protein family. Dedicator of cytokinesis proteins act as guanine nucleotide exchange factors for small Rho family G proteins. The encoded protein regulates the small GTPase Rac, thereby influencing several biological processes, including phagocytosis and cell migration. Overexpression of this gene has also been associated with certain cancers. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2014] |
Species | Scientific Name | Retrocopy | |
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Chimpanzee | Pan troglodytes | Without Homology |
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Bonobo | Pan paniscus | Without Homology |
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Gorilla | Gorilla gorilla | Without Homology |
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Orangutan | Pongo abelii | Without Homology |
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Gibbon | Nomascus leucogenys | Without Homology |
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Green monkey | Chlorocebus sabaeus | Without Homology |
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Crab-eating macaque | Macaca fascicularis | Without Homology |
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Rhesus | Macaca mulatta | Without Homology |
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Baboon | Papio anubis | Without Homology |
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Golden snub-nosed monkey | Rhinopithecus roxellana | Without Homology |
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Marmoset | Callithrix jacchus | Without Homology |
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Mouse lemur | Microcebus murinus | Without Homology |
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Mouse | Mus musculus | Without Homology |
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Rat | Rattus norvegicus | Without Homology |
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Chinese hamster | Cricetulus griseus | Without Homology |
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Rabbit | Oryctolagus cuniculus | Without Homology |
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Pig | Sus scrofa | Without Homology |
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Cow | Bos taurus | Without Homology |
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Sheep | Ovis aries | Without Homology |
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Dolphin | Tursiops truncatus | Without Homology |
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Horse | Equus caballus | Without Homology |
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Dog | Canis familiaris | Without Homology |
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Panda | Ailuropoda melanoleuca | Without Homology |
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Cat | Felis catus | Without Homology |
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Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
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Velvety free-tailed bat | Molossus molossus | Without Homology |
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Greater mouse-eared bat | Myotis myotis | Without Homology |
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Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
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Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
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Egyptian rousette | Rousettus aegyptiacus | Without Homology |
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Sloth | Choloepus didactylus | Without Homology |
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Tasmanian Devil | Sarcophilus harrisii | Without Homology |
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Opossum | Monodelphis domestica | Without Homology |
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Platypus | Ornithorhynchus anatinus | Without Homology |
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Chicken | Gallus gallus | Without Homology |
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Turkey | Meleagris gallopavo | Without Homology |
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Zebra Finch | Taeniopygia guttata | Without Homology |
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Budgerigar | Melopsittacus undulatus | Without Homology |
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Painted Turtle | Chrysemys picta | Without Homology |
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Lizard | Anolis Carolinensis | Without Homology |
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Frog | Xenopus tropicalis | Without Homology |
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Zebrafish | Danio rerio | Without Homology |
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Drosophila | Drosophila melanogaster | Without Homology |
>DOCK1P1 |
ACTTCACACAGCATGACTACAGAGAGATCCTGCTTCCCATGATGACTGATCAGCTCAAGTACCATCTGGAGAGACAGGAGAACCTGGAGGCCTGCTGTCAGCTGCTCAGCCACATCCTGGAGGTGCTGTACAGGAAGGACATGGGGCCAACTCAGAGGCAGATCCAGATTATCATGGAGAAACTTCTCCAGACTGTGAACCAAACCATCATTTCCATGGGACAAGATTCCGAACTCA |
>XM_017015817.1 |
ACTTCTTGGTTGGACATGTTgcttgacaagtgcaacccaggcaggatttcggctcccacgtgtcccttcagccctgagcctttggcagtgaacacacctaccaactatacatggcagtccAAAGTGGCTTTTTATAACTATGATGCCAGAGGAGCGGATGAACTTTCTTTACAGATCGGAGACACTGTGCACATCTTAGAAACATATGAAGGGTGGTACCGAGGTTACACGTTACGAAAAAAGTCTAAGAAGGGTATATTTCCTGCTTCATATATTCATCTTAAAGAAGCGATAGTTGAAGGAAAAGGGCAACATGAAACAGTCATCCCGGGTGACCTCCCCCTCATCCAGGAAGTCACCACGACACTCCGAGAGTGGTCCACCATCTGGAGGCAGCTCTACGTGCAAGATAACAGGGAGATGTTTCGAAGTGTGCGGCACATGATCTATGACCTTATTGAATGGCGATCACAAATTCTTTCTGGAACTCTGCCTCAGGATGAACTCAAAGAACTGAAGAAGAAGGTCACAGCCAAAATTGATTATGGAAACAGAATTCTAGATTTGGACCTGGTGGTTAGAGATGAAGATGGGAATATTTTGGATCCAGAATTAACTAGCACGATTAGTCTCTTCAGAGCTCATGAAATAGCTTCTAAACAAGTGGAGGAAAGGTTACAAGAGGAAAAATCTCAAAAGCAGAACATAGATATTAACAGACAAGCCAAGTTTGCTGCAACCCCTTCTCTGGCCTTGTTTGTGAACCTCAAAAATGTGGTTTGTAAAATAGGAGAAGATGCTGAAGTCCTCATGTCTCTATATGACCCTGTGGAGTCCAAATTCATCAGTGAGAACTACCTGGTTCGCTGGTCCAGTTCAGGATTACCTAAAGACATAGACAGATTACATAATTTGCGAGCCGTGTTTACTGACCTCGGAAGCAAAGACCTGAAAAGGGAGAAAATCAGTTTTGTCTGTCAGATTGTTCGCGTGGGTCGCATGGAGCTGAGGGACAACAACACCAGGAAACTGACCTCGGGGTTGCGGCGACCTTTTGGAGTGGCTGTGATGGATGTAACAGATATAATAAATGGAAAAGTAGATGATGAAGATAAGCAGCATTTCATTCCCTTTCAGCCGCTCGCGTTGGACGACGCCATTCGACACAAGCCGCTGAACATGTCATCCCGTTTTTCACCCAGGGTGGCAGGGGAGAATGACTTCCTTCAGACTGTTATAAACAAAGTCATCGCTGCCAAAGAAGTCAACCACAAGGGGCAGGGTTTGTGGGTAACATTGAAATTACTTCCTGGAGATATCCATCAGATCCGAAAAGAGTTTCCGCATTTAGTGGACAGGACCACAGCTGTGGCTCGAAAAACAGGGTTTCCGGAGATAATCATGCCTGGTGATGTTCGAAATGATATCTATGTAACATTAGTTCAAGGAGATTTTGATAAAGGAAGCAAAACAACAGCGAAGAACGTGGAGGTCACGGTGTCTGTGTACGATGAGGATGGGAAACGATTAGAGCATGTGATTTTCCCGGGTGCTGGTGATGAAGCGATTTCAGAGTACAAATCTGTGATTTACTACCAAGTAAAGCAGCCACGCTGGTTTGAGACTGTTAAGGTGGCCATTCCCATCGAGGACGTTAACCGCAGTCACCTTCGGTTTACCTTCCGCCACAGGTCATCACAGGACTCTAAGGATAAATCTGAGAAAATATTTGCACTAGCATTTGTCAAGCTGATGAGATACGATGGTACCACCCTGCGAGACGGAGAGCACGATCTTATCGTCTATAAGGCCGAAGCAAAGAAGCTGGAAGATGCTGCCACGTACTTGAGTCTGCCCTCCACGAAGGCAGAGTTGGAAGAAAAGGGCCACTCGGCCACCGGCAAGAGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTCCTTCCAGATCTCCACGCTCGTGTGCTCCACCAAACTGACTCAGAACGTGGACCTTCTGGGGCTCTTGAAATGGCGCTCCAACACCAGCCTGCTGCAGCAGAACTTGAGGCAGCTGATGAAAGTCGATGGTGGTGAAGTAGTGAAGTTTCTTCAGGACACGTTGGATGCCCTCTTCAACATCATGATGGAGAACTCAGAGAGTGAGACTTTTGACACGTTAGTCTTTGATGCTCTGGTATTTATCATTGGACTGATTGCTGATAGAAAATTTCAGCATTTTAATCCTGTTTTGGAAACTTACATTAAGAAACACTTTAGTGCAACGTTAGCCTACACGAAGTTGACAAAAGTGTTGAAGAACTACGTGGACGGTGCTGAGAAGCCGGGAGTAAATGAGCAGCTGTACAAAGCCATGAAAGCGCTAGAATCCATCTTCAAGTTCATCGTGCGCTCCAGGATCCTGTTCAATCAACTGTATGAAAACAAGGGAGAGGCTGACTTCGTGGAATCTTTGCTGCAGCTCTTCAGGTCCATCAATGACATGATGAGCAGCATGTCAGACCAGACCGTCCGGGTGAAGGGGGCAGCACTGAAATACTTACCAACGATCGTCAACGATGTGAAATTGGTGTTTGATCCCAAAGAGCTCAGCAAAATGTTTACTGAATTCATCCTCAATGTTCCCATGGGCTTGCTGACCATCCAGAAACTCTACTGCTTGATCGAAATCGTCCACAGTGACCTCTTCACACAGCATGACTGCAGAGAGATCCTGCTTCCCATGATGACCGATCAGCTCAAGTACCATCTGGAGAGACAGGAGGACCTGGAGGCCTGCTGTCAGCTGCTCAGCCACATCCTGGAGGTGCTGTACAGGAAGGACGTGGGGCCAACCCAGAGGCACGTCCAGATTATCATGGAGAAACTTCTCCGGACCGTGAACCGAACCGTCATTTCCATGGGACGAGATTCTGAACTCATTTCTTGAAACACATTTGGAACACATTAATATGGAATGGGCACTGAGCCCATGGAGAAGGATTTGCAGTGACTCCACGAGCCACCTGTtgacccctgaggtctggcgttgacccctgatgtccagcgttgacccctgacgtctgacgtTCCTGTCTTCTTGGAGTCGTGCCGCAGGTGCACTCTGCACAGTCTCAGGAGTGGAACTGGAAAGGGCCTTATGTAGAGCAAAGAGCATGTGGCTTGAACTTGAACCAAGTGTGGTTCTGCCAAGACCCTCTTGGGATGGGCGGACTTAGAGAGGCTGGGGATGACATGATGGCATGCAGGGGTGGTGGCAGATGAGGGAGAGGGTAGAAGTGGAGGCAGGTGGTCTCATGAGACTGTTTTGTCTCTGTTTAGGGGAGCATGGTTCTGCCTGTGCTTAGGGAAACATGGTTCTGTCTCTGGTTAGTGGGTCTTGGTCCTCTCTCTCCGATTAGGAGGTCCTGTCTCTGGTCAGGGGGGCACAGTCCAGTCTCTGGTTAGGGGGTGTGGTCCTGTCTCTAGTTGGGGCACAATCCTGCCTCCAGTTAGGGTCTTCtttttttttttttttttttttttttttttttCCCCtgagatagagtcttgctctgtcgcccaggctggagtgcagtggtgcaatcttgactcactgcaacctctgtctcctgggttcaagtgattcttgtgcctcggactcccgagaagctgggattacaggtgcacatcaccacactcaagataatttttgtattttttagtacagttggggtttcaccatgttggctaggctggtctcaaattcctgacctcaggtgatccatccgcttcggcctcccaaagtgctgggattacaggcatgagccaccatgcccagccTTATTTAGGGTCTTTATGCTAGGTGTGTGTTCACTTGACTTGTAGCCCACTGGTCAACAGTTAAACTGGAGGGAAGAGGGCACAGAAAAAGCTCATAAAGTTTGGATGGGAAGCTGGGAATGTGGAGAGATTATAAGATGTGCTCACAGCTTCATCAAAGGGTAGAATAGACCCTGCAGGGAATGATATCTCCTCTCAGACCATGTGGTCCAGGATGTCTTTGAGAAATTTCTCCTATCTCAGGCATGATAATAAGTGTGGTAGTAATAATGGCACCTCTTCACTGAGCATGCATTTACGTGCTATGCACTCTATAATGAACAGGAAGATTCTCATTTAATTCTCACAGTGCCCTGCAGACAGACAAGAAACAGTTCAAGATCCCACAGCTAGCATGGCAGCACTTGTTTCCAGCCTGGATTTGGTTCCCATGTATGCTGTCAGTCCCTTCTATAAGACACAGGCACACGATGCTGATGGCCGTGGTCCACTTCAGAAGTCATCGAAAGGACTGAGCTGCTCCTAGATCCCTGTCCTGCTTAGGGAGACAGCTGTTCAGGGAAATAAGCACCTTTCTATTTTCTATCATGTCGTATCCATGGTCCAACTCTAGGATCTCCTTGCTAGAAGGGCCAGACCACAAGCTAGGTGCCCATTTCCTGAAGGGCTTGGGATGCTCCAGCTTGGAAGAACCCCTGTGTTCTAAGGAACCCTGAGGAGTTCCTCAGGAAGAAGCCTTGCATGTTCTAAGAAGGGGGTGTGACAGCGAGGACCCATGCTTGGTCTTATCCAGAGCCACATTGATATCAAGCATTTGGCATAGGGGTCTAAGCACTGTCCGGGAATGGAAGAGGTAGAACAAACTTCCCACCTCCAGAACCATCCTCCACAGCCCTGATCTTCCCAAACAGAAGCCTCAAAGTGGGAAGAGGAGAGAGGTCTTAAACGGACTCCTCCCAATTCCACCATCTCTAAGATCTGTAAAGAAGTAAAAAAAATCCTTGGAGTTTCTTTTATAAAATGCAGCTGTCTTGAAAGGACTCTCAAAAAAATTCTGAATAAGCTATAATCATTTAATGAGTGATGACAACATCAAGATGTTTTCAAGAAGGGTGTTTGCCACTGAAAATTCGAGTTGTTTAGTGGGACCTTGTAATCCCCAACCAGCCACGAGCCCCCTCTCTGGAGTCAACAGAGCAGTGTGAGTGAAATGCTACCCTGTTTAGGATGCCTGCCCTTGCTCTTCCAATTTGCATCAAATGTAGATTTGTGCATTAACTTTTTAAAGTCGTTGCTCTGTGAATTTAGATTAGAGGAAGATCAAGGCAAAAAGTATCCCTGACAAGGTGGACAAAAACCTTAATCAGTAGACCTTCTAGAGTGGAAAAAGAGTAGAAAATAGTTCATAGGTCTGTTTTGGGTAGGCTGTTCCATTCCATTATATCTTAGAGATTTCAGCCTTTATGTGTTACTCATTTTTGCTAAATATAGTGGAAATTATGTAACTATGAATCAGCTTAAAAATTCTAAGTAATCACTGAAAATGAGTTTTTAAAAATTAAAGTGATTAAAAAGAACTCTGAAATTAATATACTTTACTTAATGATTTATTCCATGATGTTGTCAACAACAGTACTAGAAATGTGGCCTCTTTCCATCGGAATAAGGCATTAACTGGGAATGTGATTATGCCCTGACAGCTTCCCCCTATTAATGTAAGGAATAGAAAACTGGGGAACTTCACACTTAATTAGATAAATTGGGATATGCAATATAAGGCTTTTCTTTATCTGTGGGATTTTACAAAAACTCGACTTTGCAGTCAGTTGTATATTGTTTGCTTTAGTTGATTATATTTGAAATGGGTGATTGGAATGCGTCTCGTGCCTAGGATAATAATGTGCTATGATCCGAAGTATTACATCCTTAAGAAAAAACCAAAACAACTCTATTTGGCAGTTGCAGAATTGTAGACCATGTGAATACCTAGCACATGCCCAGAGACAGAAGCGTTGCAATAACCTTGCCACAGAACAAAAAGGTCATTTTATCTTTACTCTGATGTAGTCTGATGCTGTAGAAGCATGGAGTGAAATACTTATTTTTATATTAAGTCAGACTTCAGGATTTATTTCAGCCTTCCTTTTTGAGAAGCTTTCTAAGCCCTCAGCATTAAGCAGCATTTTTCCTCATCACACACGGATCTGAGCAGGTGACCGCGGCTGGGATAGGTGCTGTTGTGTTGTGTGCAGGTGGGCTGGCCAGCCATTGGGTGTGTGTTTTTCCTAGAGTAAGAAGCACTCCAGGCTGAGATGAGAGCTGTTGAAATGAGTAACATTTCCGTCTCCTGTGATACGCGCTGCTGTTGCTTCTTTCAAATGATCAGATTTACATTCTTTTAATGGGTCCTTTAAAAATGTAATCGAGTGAGAAGGACTTCTAAACATTTTTCTTTGGCCTGGATACACACGAGGGGATTGGAAATTACTAATTCATGAAAATGAAAATGTGGGCTTCTTTTAAGGAAAAATTCCCTTTGAACATTGACAGAAGTGGGCATAGGGAAGGGGAAGATTTTGCCTGGATTCTCCACTTAACTCTTGTCACCACTGGAGCATCCTGACTCCCTAGACACAAGTGATGGAAGTTATTTTGTTTCCACTCTAAACACTGTCTCAGGGGGACATTGATGGGATGGTGGAGGGTGTGTTTCATTGTGACAACAGCATCTTTGGTGGGGAATTTGCTGTTGGTGAAAACCCAGTGCTTTCTCTGAGCATGGGTGATTGATAAGGGCCTGACATGCTCCTTCATTTGGAAAATGGTATTAATAGAATTGGTTTCCCAGTGAATAGTGCCTTTTACCCAAGACTCATAACCAAATATTTTCACAAAGATGTTATATCCCCATGCATGAGCATTCATTTTGAGATGTTCATTATAATAGAGTTTAAGTATGAATGTGTTTTAAAAATGATTTTAAAATCATCTGCAAAAAAATGTTGTGTTTCAAATGGACAGTGTCTGGGTTTTGTATAGTCATCATAAAAATGTCTATAATTGTACTGTTTGCTAATAAACCTGCCTGCTTTCAGAAAATCA 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