| Retrocopy Name | STRAPP2 |
|
| Species | Homo sapiens | |
| Coordinates (hg38) | chr7:42919126-42920599 UCSC | |
| Coordinates (T2T) | chr7:43077266-43078739 UCSC | |
| Coordinates (hg19) | chr7:42958725-42960198 UCSC | |
| Strand | + | |
| Parental Sequence | NM_007178.4 | |
| Parental seq. overlap | 1330 bp | |
| Parental seq. overlap (%) | 70.2% | |
| Genomic Region |
Intragenic (PSMA2) |
|
| Retrocopy Summary | STRAPP2, located on chr7:42919126-42920599, is a retrocopy of the parental gene STRAP. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | STRAP |
| Full Name | serine/threonine kinase receptor associated protein |
| Also known as | MAWD|PT-WD|UNRIP |
| Coordinate | chr12:15882382-15903478 |
| Strand | + |
| Gene summary | Enables RNA binding activity. Involved in maintenance of gastrointestinal epithelium; negative regulation of transforming growth factor beta receptor signaling pathway; and spliceosomal snRNP assembly. Located in cytosol. Part of SMN complex. Implicated in adenocarcinoma; colorectal carcinoma; large cell carcinoma; lung carcinoma; and squamous cell neoplasm. [provided by Alliance of Genome Resources, Apr 2022] |
| Species | Scientific Name | Retrocopy | |
 |
Chimpanzee | Pan troglodytes | STRAPP2 |
 |
Bonobo | Pan paniscus | STRAPP2 |
 |
Gorilla | Gorilla gorilla | STRAPP2 |
 |
Orangutan | Pongo abelii | STRAPP2 |
 |
Gibbon | Nomascus leucogenys | STRAPP1 |
 |
Green monkey | Chlorocebus sabaeus | STRAPP2 |
 |
Crab-eating macaque | Macaca fascicularis | STRAPP1 |
 |
Rhesus | Macaca mulatta | STRAPP1 |
 |
Baboon | Papio anubis | STRAPP1 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | STRAPP1 |
 |
Marmoset | Callithrix jacchus | STRAPP2 |
 |
Mouse lemur | Microcebus murinus | Without Homology |
 |
Mouse | Mus musculus | Without Homology |
 |
Rat | Rattus norvegicus | Without Homology |
 |
Chinese hamster | Cricetulus griseus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Pig | Sus scrofa | Without Homology |
 |
Cow | Bos taurus | Without Homology |
 |
Sheep | Ovis aries | Without Homology |
 |
Dolphin | Tursiops truncatus | Without Homology |
 |
Horse | Equus caballus | Without Homology |
 |
Dog | Canis familiaris | Without Homology |
 |
Panda | Ailuropoda melanoleuca | Without Homology |
 |
Cat | Felis catus | Without Homology |
 |
Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
 |
Velvety free-tailed bat | Molossus molossus | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
 |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >STRAPP2 |
| TCTTATGAGTATTTCTAAATCAGTGCTTGCAAAGACGGCAAACCTATGCTATGCCAGGGAGATACAGGAGACTGGATTGGAACAATTTTGGGTCATAAAGATGCTGTCTGGAATGCAACACTGAATAAGGATGCCACCAAAGCAGCCACAGCAGCTGCAGATTTCACAAAGTGTGGGATGCTATCCCAGGAGATGAACTGATGACCCTGGCTCATAAACACATTATCAAGACTATGGATTTCATGCAGGATAGTAATTATTTGTTAACCAGGGGACAGAATAAACTGTTTTGCATATATGACTTGAACAAACCCGAAGCAGAACCTGAGGAAATTAGTGATCACAGCTCTGATATTAAAAAGGCCCTATGGTACAGTGAGGATAAACAGATTCTTTCTTCTGATGACAAAACTGTTAAGACTTTGGGATCATGCTACTATGACAGAAGTGAAATCTCTAAATTTTATTATGTTGGCTAGTAGTATGGAATATATTTCTGAGGGAGAGATTTTGGTAATAACTTATGGCTGATCCAGTGCTTTTGACAGTACAGTAAGTTTGGAACCAATTAAATCCTTTCAAGCTCCTGCAAACATTAACTCTGAATCTCTTCACCTTGAGAAAGAATTTCTTGTTGCAGGTGGTGAAGATGTTAAACTTATAAGTATGATGATAATAGTGGAGAAGAATTAGAATCCTACAAAGGACACTCTGGTCCTATTCACTGTGTGAGATTTGATCCTGATGGAGAACTCTATGCCAGTGGTTCTGAAGATGGAACACTGAGACTGGCAAACTGTGGTAGGAAAAACATATGGCCTTTGGAAATGTGTGCTTCCTGAAGAAGATACTGGTGAGCTGGCAAAGCCAAAGATTGGTTTTCCAAAGACAAGAGAAGAGCTAGAAGAAATTGCTTCAGAGAATTCAGATTCCATCTATTCTTCAACTCCTCAAGTTAAGGCCTGAACATCAAGCATGTGCCACAGACAGCATACAACTGGACTAGAACGAGCAAGCAGAGAAAAGCATCAGCCTTCCAGAGTTACTCTCTGCTTAAGGCAAAAACAGCAATAAATAATGAGGAATATGAATTAGCTCCATTGCTGAAACAACTAACATGGTGTTACCCATAAGTGAAATCTCAAGAGTATCAGATGAAGGGAGGTTGAGTTATCCTCTTGTAGTACAATGGCCTGTCATCTTTTTAATGAATATGTACAAGATAACATCCAACTTCTCTTATTACAATTAAGAGTTCTTGCAGCTGTTTATGTCATTATGGAGAAGAAAAATATATTGGCTTATTTGTCTGACTTTTCCCTTAAAGCAGAATGTCTTTGTTGCTATTGTTTTTTGCTTTGGTTGTAAAGAGGGAATACATGATAAAGTAACTGGTTTAATTTCTTTCATTGTACACTGGTTCTGAACATCTAATTATTTTTAGTTGTCTAAATAAAATGCCTCTGAAACAAAA |
| >NM_007178.4 |
| CGTCGTCACTTCCTGCCGATGCCGGTGTGGACGCTGTGAATCGTGGCTGGCCCGGTTCTCCGCTTCTCCCCATCccctactttcctccctccctccctttccctccctcGTCGACTGTTGCTTGCTGGTCGCAGACTCCCTGACCCCTCCCTCACCCCTCCCTAACCTCGGTGCCACCGGATTGCCCTTCTTTTCCTGTTGCCCAGCCCAGCCCTAGTGTCAGGGCGGGGGCCTGGAGCAGCCCGAGGCACTGCAGCAGAAGAGAGAAAAGACAACGACGACCCTCAGCTCGCCAGTCCGGTCGCTGGCTTCGCCGCCGCCATGGCAATGAGACAGACGCCGCTCACCTGCTCTGGCCACACGCGACCCGTGGTTGATTTGGCCTTCAGTGGCATCACGCCTTATGGGTATTTCTTAATCAGCGCTTGCAAAGATGGTAAACCTATGCTACGCCAGGGAGATACAGGAGACTGGATTGGAACATTTTTGGGTCATAAAGGTGCTGTTTGGGGTGCAACACTGAATAAGGATGCCACCAAAGCAGCTACAGCAGCTGCAGATTTCACAGCCAAAGTGTGGGATGCTGTCTCAGGAGATGAATTGATGACCCTGGCTCATAAACACATTGTCAAGACTGTGGATTTCACGCAGGATAGTAATTATTTGTTAACCGGGGGACAGGATAAACTGTTACGCATATATGACTTGAACAAACCTGAAGCAGAACCTAAGGAAATTAGTGGTCATACTTCTGGTATAAAAAAAGCTCTGTGGTGCAGTGAGGATAAACAGATTCTTTCTGCTGATGACAAAACTGTTCGACTTTGGGATCATGCTACTATGACAGAAGTGAAATCTCTAAATTTTAATATGTCTGTTAGTAGTATGGAATATATTCCTGAGGGAGAGATTTTGGTTATAACTTATGGACGATCTATTGCTTTTCATAGTGCAGTAAGTTTGGACCCAATTAAATCCTTTGAAGCTCCTGCAACCATCAATTCTGCATCTCTTCATCCTGAGAAAGAATTTCTTGTTGCAGGCGGTGAAGATTTTAAACTTTATAAGTATGATTATAATAGTGGAGAAGAATTAGAATCCTACAAGGGACACTTTGGTCCTATTCACTGTGTGAGATTTAGTCCTGATGGAGAACTCTATGCCAGTGGTTCAGAAGATGGAACATTGAGACTATGGCAAACTGTGGTAGGAAAAACGTATGGCCTTTGGAAATGTGTGCTTCCTGAAGAAGATAGTGGTGAGCTGGCAAAGCCAAAGATTGGTTTTCCAGAGACAACAGAAGAGGAGCTAGAAGAAATTGCTTCAGAGAATTCAGATTGCATCTTTCCTTCAGCTCCTGATGTTAAGGCCTGAGCGTCAATCATATGTGCAGTTAGTATACAACTGACTAAAACAAGCAAGCAGAGAAAAGCATCAGCCTTCCAGAGTTACTGTCTGCTTAAGGCAGAAACAGCAGTAAATAATGAGGAAAATGAATTAGCTCCAGTGCTGGAACAACTAACTAACTTGGTGTTACCTGTAAGTGAAAACTCAAGTGTCAGATGAAGGGAGGTGGAGTTATCCTCTTATAGTACAGTGGCCTGTTATCTTTTTAATGAATATATACAAGCCAACATCCAATTTCTATTATTACAATTAGGGTTCTTGTAGCTGTTTATGTTAATATGGAGAAGAAAACTATATTGGCTGATTTTTTCTGATCTTAAAGCAGAATGCCTTTTCTTTTTTTGCTTCAGTTGTAAAGAAGAGGGAATACATGATAAAGTAACTGGTTTGATTTCTCGTTCATTGTACACTGCCTCTGAACATCTAATTGTTTTTAGTTGTCTAAATAAAATGCCTCTAAAACAAAA |
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