Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Retrocopy Name MINOS1P3
Plot displaying the genomic locations of a retrocopy (in chr12) and its respective parental gene (in chr1). Each line represents a retrocopy.
Species Pan troglodytes
Coordinates chr12:38336659-38336899  UCSC
Strand -
Parental Sequence XM_009449727.2
Parental seq. overlap 226 bp
Parental seq. overlap (%) 40.7%
Genomic Region Intergenic
Retrocopy Summary MINOS1P3, located on chr12:38336659-38336899, is a retrocopy of the parental gene MICOS10. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name MICOS10
Full Name mitochondrial contact site and cristae organizing system subunit 10
Also known as MINOS1
Coordinate chr1:17874324-17904009
Strand +
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Human Homo sapiens MICOS10P5
Bonobo Pan paniscus MICOS10P3
Gorilla Gorilla gorilla MICOS10P4
Orangutan Pongo abelii MINOS1P3
Gibbon Nomascus leucogenys MICOS10P2
Green monkey Chlorocebus sabaeus MINOS1P3
Crab-eating macaque Macaca fascicularis MINOS1P3
Rhesus Macaca mulatta MICOS10P3
Baboon Papio anubis MICOS10P3
Golden snub-nosed monkey Rhinopithecus roxellana MICOS10P3
Marmoset Callithrix jacchus Without Homology
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>MINOS1P3
ACTTACCTTCTTTAAAAGACGAATGTGGCCATTAGCCTTCGGTTCTGGCATGGGATTAGAAATGGCTTACTCCAACTGTCAGCATGATTTCCAGGTCCATATCTTCTACATGGAAAATATGTCAAACAGCAGGAGCAGTGACTTCACCTGACAACATCCCAGTGGGAGGAAAAGAGAAACTGTGTTTATGCCTCAGGAATACTGAAGTGCCCTGGAGTAAACTGACATTCTTCTGTAACAG
>XM_009449727.2
GACTTCTTTCCAGCTCTCGCGAGACTTTCAGGGGTCGGAGCGCGGGGGCCGGCCGAGAGGAAAGCTGGAGGCGCGGGTGGGGAACATGTCTGAGTCGGAGCTCGGCAGGAAGTGGGACCGGTGCCTGGCGGATGCGGTCGTGAAGATAGGTACTGGTTTTGGATTAGGAATTGTTTTCTCACTTACCTTCTTTAAAAGAAGAATGTGGCCATTAGCCTTCGGTTCTGGCATGGGATTAGGAATGGCTTATTCCAACTGTCAGCATGATTTCCAGGCTCCATATCTTCTACACGGAAAATATGTCAAAGAGCAGGAGCAGTGACTTCACCTGAGAACATCCCAGCGGGAGGACAAGAGAAATCATGTTTATTCCTCAGGAATACTGAAGTGCCCTGGAGTAAGCTGCCATTCTTCTGTAACAATGTTATCAGTAATGCTTTAAACTCCAGCACCTGGTTATGCATTTGAAACCAAGTCTGTTTCTTGTTTTGTATTTTCTCTCTGGAAGTTGTAAGGAGGTGGTCTTAAATAAATTAAACAAAAATAGGAAGTCCA

Publications

PMID - Link Title