Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Retrocopy Name ZNF732P3
Plot displaying the genomic locations of a retrocopy (in chr19) and its respective parental gene (in chr4). Each line represents a retrocopy.
Species Pan paniscus
Coordinates chr19:23055299-23056183  UCSC
Strand +
Parental Sequence XM_034958100.1
Parental seq. overlap 729 bp
Parental seq. overlap (%) 22.5%
Genomic Region Intragenic (LOC100995955)
Retrocopy Summary ZNF732P3, located on chr19:23055299-23056183, is a retrocopy of the parental gene ZNF732. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name ZNF732
Full Name N/A
Also known as -
Coordinate chr4:273229-309179
Strand -
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Gorilla Gorilla gorilla LOC101130248P2
Gibbon Nomascus leucogenys LOC100590160P1
Green monkey Chlorocebus sabaeus LOC103234268P4
Baboon Papio anubis LOC103880007P4
Cow Bos taurus LOC112442207P3
Sheep Ovis aries LOC114118023P1
Tasmanian Devil Sarcophilus harrisii LOC116422724P2
Opossum Monodelphis domestica LOC100015925P17
Human Homo sapiens Without Homology
Chimpanzee Pan troglodytes Without Homology
Orangutan Pongo abelii Without Homology
Crab-eating macaque Macaca fascicularis Without Homology
Rhesus Macaca mulatta Without Homology
Golden snub-nosed monkey Rhinopithecus roxellana Without Homology
Marmoset Callithrix jacchus Without Homology
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>ZNF732P3
TTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCATTTGTATGGTCCTCAACCCTAACTAGACATAAGAGGCTGCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGCCAAAGCTTTTAGCCAATTCGGACACCTTACTACACATAGGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCATTTATATGGCCCTCAACCCTAACTAAACATAAGAGGATTCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTCTTCGATCCTCAAATCTTACTAAACATAAGATAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGCGGCAAAGCATTTATATGGTCCTCAAACCTTACTGAACATAAGAAAATTCATACTAGAGAGAAACCCTACAAATGTGAAGAATGTGGTAAAGCATTTAGCCGATCCTCAGCCCTAACTATACATAAGAGGATGCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCAGTCCTCAACCCTTACTGCACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCATTTATATTGTCCTCGACCCTATCTAAACATAAGAGGATTCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAATCAATCCTCAAATCTTAGTACACATAAGATAATTCATACTGGAGAGAAACCTTTCAAGTGTGAAGAATGTGGAAAAGCATTTAATCGATCCTCAAATCTTAGTACGCATAAGATAATTCATACTGGAGAGAAACCTTACAAGTGTGACGAGTGTGGCAAATCATTTA
>XM_034958100.1
ataggttaaaattataaacaatttcacttgtttctttttattatttttgatgtggctaataaaaaattgaaaattcacaaatagctaacattttatttttTAAAGGATTGCTTCCCCCTTAAAATCCTACTCAAAAGACCAGAGGACAGAGAGGTTATGAAATCTAAAATATTAAAATAATTGTCATTATATTGTTTCCATTTGTGAACAAgtgtgtgtctgtgtgtgtgCGCGCGCGTACGTACACAATTGATAAACGGGCGTAACCTTACACACCAGAAGGTTAAAAATGAACCCCCAACAGAGCCAAGCCTAGCACAGAAAGCCCTGACTGAAAATACCTGGAGGCACGAGTCTGTCTCTCTTGCCTCATTAAGTGCACTGTGTGGTGGCAAGTTCTGTCACTCAAATTCTGAGGGTGGGGAGCTTGGTATCTTATCCAATCAGAGCGCTGGACTGAGAACTGCCCAATCAGGCGCGCAGCCGGAGAGGAGGGGGCGGCATCCGGGATCTGGCGCGGCTTTTGCCTTTTGCGCCAGCGAGAGCTCGGTTAGGGTCTCCGCCGCCGTGCTTTCACCCCTCAGGGAGGCGTCGGTGATTCGGTCACAGCCTCAGCCTCCGTCGCTCTGTGACCTGCGGGTATTGGATGATTCGTAGCTGAGACTCCGCTACACCCCTGAAGTGGGGAAATGTCCccttgccctgtgcacctcctccgcgtggctgttcctgagtggcatcttttagaatacgctggtgtgggcgcgcacagcgcttcgctgagttctGAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTGACCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTGTTGCTATCTCTAACCCAGACCTGGCCATCTATCTGGAGCAAAGAAAGGAGCCCTACAAAGTGAAGATACATGAGACAGTAGCCAAACACCCAGCTGTGTGTTCTCATTTCACCCAAGACTTTTTGCCAGTGCAGGGGATAGAAGATTCGTTCCACAAACTTGTATTAAGAAGATATGAGAAATGTGGACATGAGAATTTACAATTAAGAAAAAGCTGTAAAAGGAAGGTGCAGAAAGGAGGTTATAATGAATTTAATCAATGCTTGTCAACTATCCAGAGCAAAATATTTCAGTGTAGTGCACATGTCAAAGTATTTAGTACATTTTCAAATTCAAACCAACGTAGGATAAGACATACTGGAGAGAAACACTTTAAAGAATGTGGCAAGTCATTTCAGAAGTTCTCAGACCTAACTCAACATCAAGGAATTCATGCTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGACTTTAAATGGTATTTAATCTTTAATGAATATAAGATAATTCATACTGGAGAGAAACCCTTCACATGTGAAGAATGTGGCAACATCTTTACCACATCCTCAAACTTTGCTAAACATAAAGTTCATACTGGAGAGAAATCTTACAAATATGAAGAATGTGGCAAAGCCTTTAATAGGTCCTCAACCCTTTCTAAGCATAAGAGAATTCATGCTGAAGAGAAACCCTTCACATGTGAAGAATGTGGCAAAATCATTACCTCATCCTCAAATGTTGCCAAACATAAGAAAATTCATACCGGAGAGAAACTCTACAAATGTCAGGAATGTGGCAAAGTCTTTAATAGGTCCACAACTCTTACTAAACATAACAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCCTTTAGTAGGTCCTCAGTTCTGAATGAACATAAGAGAATTCATACTGGAGAGAAGCCCTACAAATGTGAACAATGTGGCAAAGCCTTTAGACAATCCGCAACCCTTAATAAACATAAGAGTATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGAAAAGCCTTTAGTCGGTTCACAACCCTTAATGAACATAAGAGAATTCATACTGGAGAGAGGCCCCACAAATGTGAAGAGTGTGGCAAAGCCTTTGGATGGTCCACAGACCTGAATAAACATAAGATAATTCATACTGGAGAGAAACCTTACAAATGTGAAGAGTGTGGCAAAGCCTTTGGATGGTCCACATACCTGAGTAAACATAAGAAAATTCATACTGGAGAGAAACCTTATAGATGTGAAGAGTGTGGCAAAGCATTTAGACGTTCCAGAGTCCTGAATAAATATAAGACAATTCATACTGGAGATAAAACCCCCAAATGTAAAGGATGTGGCAAAGCCTTTAAGCGGTCCTCAAACCTGAATGAACATAAGAAAATTTATACTGGAAATAAACTATACAAATGTGAAGAATGTGGCAAAGCTTTTGGATGGTCCACAACCCTGAATGAAAATAAGAATCATACTGGAGAAAAACCCTACAAATGTAAAGAATGTGGGAAAGCCTTCAAACAGTCCGCATACCTGAATCAACATAAGAAAATTGATGCTGGAGAGCAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGATGGTCCACAGCCCTGAATGAACATAAGAAAATTCATATGGGAGACGAATCCTACAAATGTAAAGAATGTGGGAAAGCCTATAAACGGTCCTCAACCATAAATAAACGTAAGAGAATCCATACTGGTGAGAAACCCTATAAATGTTTAGAATGTCATAAAACCTTTAATAGCTCCAAAACCCTAATTGAACATAGGATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTTGCAAAGCCTTTAGACAGTCCGGAAACCTTTATGTACATAGGAGAATTCATACTGGAGATAAAACCATACAAGTGTAAAGGATGTGGAAAAGCCTTTAAGCTGTACTCCAGCATTCTTAAACATAAGAGAACTCGTACTGGAGGAATGTCTTACCAATATGAAGAATGTGGCAGTCTTTAAATGTTCCTCAATCTTTTCTAATCATAAGATAATTCATAATGGAGAGAAACTCCAGAAATGTGAAAAATATGAGAAAGCTTTTAACCACACCTCACTGTGTTCTAAACATAAGATAAATGATATTAGTGAGAAGCCATATGAAAAATGAAAATGTGGCAAAGACTTCAAAttctttttttttttttttttgagacagagtcttgctctctcccccagtctggagtgcagtggcacgatcttggctca

Publications

PMID - Link Title