Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Retrocopy Name RNF14P2
Plot displaying the genomic locations of a retrocopy (in chr3) and its respective parental gene (in chr6). Each line represents a retrocopy.
Species Macaca fascicularis
Coordinates chr3:43244486-43245724  UCSC
Strand -
Parental Sequence XM_005558086.2
Parental seq. overlap 1101 bp
Parental seq. overlap (%) 35.4%
Genomic Region Intragenic (TRRAP)
Retrocopy Summary RNF14P2, located on chr3:43244486-43245724, is a retrocopy of the parental gene RNF14. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name RNF14
Full Name N/A
Also known as -
Coordinate chr6:141129924-141151279
Strand +
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Human Homo sapiens RNF14P3
Chimpanzee Pan troglodytes RNF14P3
Bonobo Pan paniscus RNF14P3
Gorilla Gorilla gorilla RNF14P3
Orangutan Pongo abelii RNF14P3
Gibbon Nomascus leucogenys RNF14P2
Green monkey Chlorocebus sabaeus RNF14P3
Rhesus Macaca mulatta RNF14P2
Baboon Papio anubis RNF14P1
Golden snub-nosed monkey Rhinopithecus roxellana RNF14P1
Marmoset Callithrix jacchus RNF14P1
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>RNF14P2
TTGTTATTAACAATTCCTCATAAAATTAAACGTTGTCAGAAGACTGAGAAGCTCAGGAGGTGAACTGTTGGCCCCGGCGAGTATTGATGATGGAGATAAATTTGGAAAAGCAGAACCTGTCCACGGTGGAAAATCAGGATCGCTCTGGATTTGCCACAGAACTTCAAGATATTTGAGTGGCAATTCAGATGAGTGCCTCCAGAATAGTGGCTTTGAATATACCATTTGCTTTCTCCCTCCACTTGCGCTGAACTCTGAACTGCCACCAGATTAGCCAGCCTCCTTCCCATCTTCGTTCACACTTAGTGGCAAATTGCTGTCACCAACTCAGCTCTCTGCTCTATGCAAGCACTAGACAACCTATGGGAAGAACACAGTGGCAGCAGGATCCTGTCTGCCCGGATGCAGTTTCTTAAGCAAGAAGCCCTGGTGCACCTGAACATTGTCTCTCCTTCTGAGCTCAAGATGGGTTCTCAGGAAAAAGTGCCGAGGACAGCTCAAGCCTCTCCCATCACAGAGCTAGATTTTGGAGGAGCTGCTGGATCTCATGTAGACCCAGAGGAAATTGCGGATGAGAGAGCTGTGCAGGATGTGGAATCACTGTCAAGTCTGGTCCAGGAAACCTTGGACTTTGATCAAGCTCAGCAGATAAAATGCTTTAATAGTAGATTGTTCCTGCACGATGCCTGTTTCTGTGAGAAGCTAGGCAGTGAATGCATGTACTTCTTGCAGTGAGCCCTGTGTACTGCAAAGCCTGTCTGAAGGACTGCTTTGAAATCCAGATCAGAGATGGCCACGTTCAACGCCTCAACTGCTCAGAACCAAAGTGCCCTCCGGTGGCCACTCCTGGCCAGGTCAAAGAGCCAGTGGAAGTACTTATCTGCTCGTCATGGCTGCCTTCTCCTCCTGTCCACCTTGGAGCTGGAGGCAGATGTGGTGTGCTGCCCCCACCCATGGGGGCCTGCAGGGCGTGGCTGTACCACGGGCATCTGCTCCAGCTGCAACTTTGCCTTCTGTACCTTGTGCAGACTGACCTACCACGCGGCCTCTCCATGTAAGGTGATCGCAGAGAAATTAATAGACTTACAAAACTAATGCCTGCAAGCATATGAGGCCAAGACAAGATTTAAGAGGTAAGGTGAGAGGGTGATTCAGAAGGCACTGGAAGAGATGAAAAGTAAGGAGTGGCTAGAAGAGGACTCAAAGAGATGCCCATGCTGTGGAGTGCCCATAGAGAAG
>XM_005558086.2
AGGCCTGGTCGGCTGGCGGCGGTGAGTGGGCCCCGGGCAAGGGCGGAGGGCGGAACTTTGGAGCTTGGCACTGCCGGGTGGCCGGAAGATGGCAGGATTTTCATAGTATATGTAGTATGAGTTCCACATCTTGGCCTCTTATCCAGCTTCAGCAGTCTCAGCTCCACCAGTTAGAGAATAAATGGGATTTGCACGAACTCCACTCTGAGCTGAAATACAGACTGTGGTGTTAATATTCTTTTCTTCTGGTTGTTATTAACAGGTCCTCAGAAAATTAAATGTCGTCAGAAGACCGAGAAGCTCAGGAGGATGAATTGCTGGCCCTGGCTAGTATTTATGATGGAGATGAATTTAGAAAAGCAGAGTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGCCACAGAATTTCAAGATATTTGTGAGCGGCAATTCAAATGAGTGTCTCCAGAATAGTGGCTTTGAATACACCATTTGCTTTCTGCCTCCACTTGTGCTGAACTTTGAACTGCCACCAGATTATCCATCCTCTTCCCCACCTTCATTCACACTTAGTGGCAAATGGCTGTCACCAACTCAGCTATCTGCTCTATGCAAGCACTTAGACAACCTATGGGAAGAACACCGTGGCAGTGTGGTCCTGTTTGCCTGGATGCAATTTCTTAAGGAAGAGACCCTAGCATACTTGAATATTGTCTCTCCTTTTGAGCTCAAGATTGGTTCTCAGAAAAAAGTGCAGAGAAGGACAGCTCAAGCCTCTCCCAACACAGAGCTAGATTTTGGAGGAGCTGCTGGATCTGATGTAGACCAAGAGGAAATTGTGGATGAGAGAGCTGTGCAGGATGTGGAATCATTGTCAAATCTGATCCAGGAAATCTTGGACTTTGATCAAGCTCAGCAGATAAAATGCTTTAATAGTAAATTGTTCCTGTGCAATATCTGTTTCTGTGAGAAGCTGGGTAGTGAATGCATGTACTTCTTGGAGTGCAGGCATGTGTACTGCAAAGCCTGTCTGAAGGACTACTTTGAAATCCAGATCAGAGATGGCCAGGTTCAATGCCTCAACTGTCCAGAACCAAAGTGCCCTTCGGTGGCCACTCCTGGTCAGGTCAAAGAGCTAGTGGAAGCAGAGTTATTTGCCCGTTATGACCGCCTTCTCCTCCAGTCCACCTTGGACCTGATGGCAGATGTAGTGTACTGCCCCCGGCCATGCTGCCAGCTGCCTGTGATGCAGGAGCCTGGCTGCACCATGGGTATCTGCTCCAGCTGCAATTTTGCCTTCTGTACTTTGTGCAGGTTGACCTACCATGGGGTCTCTCCATGTAAGGTGACTGCAGAGAAATTAATGGACTTACGAAATGAATACCTGCAAGCAGATGAGGCTAATAAAAGACTTTTGGATCAAAGGTATGGTAAGAGAGTGATTCAGAAGGCACTGGAAGAGATGGAAAGTAAGGAGTGGCTAGAGAAGAACTCAAAGAGCTGCCCATGTTGTGGAACTCCCATAGAGAAATTAGATGGATGTAACAAGATGACATGTACTGGCTGTAAGCAATATTTCTGTTGGATTTGCATGGGTTCTCTCTCTAGAGCAAACCCTTACAAACATTTCAATGACCCTGCTTCACCATGTTTTAACCGGCTGTTTTATGCTGTGGATGTTGACGACGATATTTGGGAAGATGAGGTTGAAGACTAATTAACTACTGCTCAAGATATGGAAGTGGATTGTTTTTCCCTAATCTTTCGTCAAGTACACAAAGTAACTTTGCGGGATATTTAGGGTACTACTCATTCACTCTTCCTGTGTAGAAGATATGGAAGAACAAAGTTTATATTTTCATGTGGTACTACTGAAGAAGGTGCATTCATACATTTTAAAATGTAAGTTGAGAAAAATAAGCCAAAGGTTCAGAAAATGAAACTACAGAATATTAAATATTATAATGTGATAATGTGCCCAAAGCTCTGAATAGTAAAAAATTAAATATTTATTTTCTTCCCCAAGCTTTAGGTAAGGAGAAGAGGGGTCAAGAGTTAAACTTAGAGACCCTTTGTCTCTGAGAAGCATCCCTCTAAGACATTCTGTTGGAGCTCCCTCAGTACTACTATTCCTTACAACTGGAGTGGGTAGAAGCCTTTTGAAAATTATACTGAGAACCTGATCTCATTTACTCCATGTTAATCATATTCCTACCAACCTAAATTTCTGCCAACTCAGTTCTCTTTGGAGGAAGCCCTTTACTCTGTAACTGACTGGATGGTCCAGTGTCATTTTGATCTGCTTTTCAGAATGGAAATTTATAATAATTTAAATATATGTTTTAATACCACAAACACTGTGGGGCACTTGATATTTATTAGTGGTGTATATGATCCACTGGTTGCAGGCCAAATCTAGAATTTAGTGATACTGGCTCAGAAGAATTTAAGTTCTATTCAACTTTCCTAGGAGTTAGAACCTAGATTCAAAATGACTTGTCTTTGCTACTTTTGTTCCACATTCTCTCTCTTTACCTTTGCCCTACCTTCTGTTTGTAAGGACGATTTTAGTATTAATTCCAGGAACACATGTTTTTATTTCCTCTGCTGGAATAGGAGAAAGCTTAATATATTCCCAAGCTGAATGTTCTTGAATTATCTGCATTCACCACTGTATATGCATATAGTGACAATATAACCTGTCTATACCACGGTAGTTCCAGTCCTAACTTTCTGAATTATTCTTAAAGATCTTCTCTAACAAGCTATGGGAATTTGGCTTCATACTCTTTTTTTTGCAACAGCATTGTTCTGGGTGATAATTTTGAATTGATACCTGTTCTTTTTTTCGGGTTTTGTTGGCTTTTTGAAAAATTGTCTTTTCTTATCATTGGTGGGTGGCTTGGTAGCAAAATAACATTTTTTTGGAAAAGAGGACAGAAAAATTGAACTGCAGCTTGAGAACATATTCTTTTTTTCCTACTTCGTCATTGAAAATTGAGGAATCACTTTTAACTGTTTTAGGTGTGTGTGTCCAGAGTGAGCAAGGACTATGTTTTTGGATTGTCAAAGAGGATGCttaatcttaaaataaaaataaatttaaaaatcatcttataattagaa

Publications

PMID - Link Title