Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Retrocopy Name ZNF670P1
Wait
Plot displaying the genomic locations of a retrocopy (in chr10) and its respective parental gene (in chr25). Each line represents a retrocopy.
Species Chlorocebus sabaeus
Coordinates chr10:88814165-88814507  UCSC
Strand -
Parental Sequence XM_007990043.1
Parental seq. overlap 286 bp
Parental seq. overlap (%) 16.3%
Genomic Region Intragenic (NBEAL1)
Retrocopy Summary ZNF670P1, located on chr10:88814165-88814507, is a retrocopy of the parental gene ZNF670. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name ZNF670
Full Name N/A
Also known as -
Coordinate chr25:84082881-84117947
Strand -
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Human Homo sapiens ZNF669P1
Chimpanzee Pan troglodytes ZNF670P1
Bonobo Pan paniscus ZNF670P1
Gorilla Gorilla gorilla ZNF669P1
Orangutan Pongo abelii ZNF670P1
Gibbon Nomascus leucogenys ZNF670P1
Crab-eating macaque Macaca fascicularis ZNF670P1
Rhesus Macaca mulatta ZNF670P1
Baboon Papio anubis ZNF669P1
Golden snub-nosed monkey Rhinopithecus roxellana ZNF670P2
Marmoset Callithrix jacchus ZNF669P1
Mouse lemur Microcebus murinus Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>ZNF670P1
TGGACTCAGTGACTTTTGAGGATGTGGCTGTGACCTTCACCCAGCAGGAGTGGGCGTTGCTGGATTTTTCCCAGAAGAAACTCTTATAGAGATGTGACACAGGAAACCTTCAGGAATTTGGCTTCTACAGGAAACAAATGAGAAGACCAGAATGTTGACGATCGAGTCAGAAAATATGGGAGAAATGTAAGTCATATGGTAGAGAGACTGTGTGAAGGTAAACAAAATAGTCAATGTGGAGATACCTTCAGCCAGAATTCAAATCTTAATCTGAACAAGAAAGTTTCTACTGAAATAAAATCATGTGTATGCAGAATGTGTGGAAAAGTCTTCATATGTCATA
>XM_007990043.1
gcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccGAAATCTGAAATTTTAGAATAATTGTCATCATAGTGTTTCCAATCATAAATATCACAAATACTACTCATAAATGGACATAACCTTGTGTACAAGGTTGAATGGAAAAGTCCCCCAGGGGGCGCCAGGTCTCAGCACGGGGCAGAATCCACGCCTTGGAAAAGGACTGCACGGAAAGAACTGGCCTCACTCCGCGCCTTGTCTGATGGCAGCTCCGGTCACTCAGGACTGAAGGGGCGGGGCCTAAAGCCCTGTCCAATCGGGCGCTGGGAAGGGGACTGTTCTCTCAAGCGCACGGCGAAAGGAGGGGGCAACTTCCGGGCCTTGGCGGGGCTTTTGTGTTGGGCAGCGAGACTCTGGCGAGCTCGGTGTGTCTCCGCCGCTCCTTCCCCTTATCCCTGGGAGGTCCAAGTGGTTCCGCGGCAGCCTCTGTGGCTCTGGGACCTGCAGGTCCTGGAAGGTCCTTAGGGAAGACCCGAGACACCGGAGAGTGGGAAATGGATTCAGTGTCATTTGAAGATGTGGCTGTGGCCTTTACCCAGGAGGAGTGGGCTTTGCTGGATCCTTCTCAAAAGAATCTCTACAGAGATGTGATGCAAGAAATCTTTAGGAACCTGGCTTCCGTAGGAAACAAATCAGAAGACCAGAATATCCAAGATGACTTCAAAAATCCTGGGAGAAATCTAAGTCATGTGGTAGAGAGATTGTTTGAAATTAAAGAAGGCAGTCAATATGGAGAAACCTTCAGCCAGGATTCAAATTTGAATCTGAATAAGAAAGTTTCTACTGGAGTAAAACCATGTGAATGCAGTGTGTGTGGAAAAGTCTTCATATGTCATTCAGCCCTTCATAGGCACATCCTGTCTCACACTGGAAACAAACTATTTGAGTGTGAGGAATGTCCAGAGAAGTTATATCAATGCAAACAATGTGGGAAAGCCTTTATCTCTCTCACCAGTGTTGACAGACACATGGTAACACACACTAGTAATGGGCCTTATAAGGGTCCAGTGTATGAGAAACCTTTCGATTTTCCTAGTGTATTTCAAATGCCTCAGAGCACTCACACCGGAGAGAAAACATACAAATGTAAACATTGTGATAAAGCCTTCAATTATTCAAGTTATCTTCGTGAACATGAAAGAACTCATACTGGAGAGAAACCCTATGCATGTAAGAAATGTGGTAAATCATTCACTTTTTCCAGTTCTCTTCGCCAACACGAAAGATCTCACACTGGAGAGAAACCCTATGAATGTAAAGAATGTGGCAAAGCCTTCAGTCGTTCCACTTACTTGGGAATACATGAAAGAACGCATACTGGAGAAAAACCCTATGAATGTATAAAATGTGGCAAAGCCTTTAGATGTTCCAGAGTCCTCAGAGTCCATGAAAGGACTCACAGTGGAGAAAAGCCCTATGAATGTAAACAATGTGGTAAAGCCTTCAAATATTCTAGTAACCTATGCGAGCATGAAAGAACTCACACTGGAGTGAAACCTTATGGATGTAAGGAATGTGGTAAGTCGTTTACTTCTTCCAGCGCCCTTCGAAGCCATGAAAGGACTCATACTGGAGAAAAACCCTATGAATGTAAGAAATGTGGTAAAGCCTTCAGTTGTTCCAGTTCCCTTCGAAAGCATGAAAGAGCTTATATGTGGTaaaaaaaaaaaaaaacaataaaaCACCTCTGTGAAT

Publications

PMID - Link Title
No publications available for this retrocopy