| Retrocopy Name | YY1P4 |
|
| Species | Macaca fascicularis | |
| Coordinates | chrX:19790870-19791375 UCSC | |
| Strand | + | |
| Parental Sequence | XM_005562202.2 | |
| Parental seq. overlap | 424 bp | |
| Parental seq. overlap (%) | 6.7% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | YY1P4, located on chrX:19790870-19791375, is a retrocopy of the parental gene YY1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | YY1 |
| Full Name | N/A |
| Also known as | YY1 |
| Coordinate | chr7:165445957-165490441 |
| Strand | + |
| Gene summary | N/A |
| Species | Scientific Name | Retrocopy | |
 |
Human | Homo sapiens | YY1P4 |
 |
Chimpanzee | Pan troglodytes | YY1P4 |
 |
Bonobo | Pan paniscus | YY1P4 |
 |
Gorilla | Gorilla gorilla | YY1P4 |
 |
Orangutan | Pongo abelii | YY1P4 |
 |
Gibbon | Nomascus leucogenys | YY1P4 |
 |
Green monkey | Chlorocebus sabaeus | YY1P4 |
 |
Rhesus | Macaca mulatta | YY1P4 |
 |
Baboon | Papio anubis | YY1P4 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | YY1P1 |
 |
Marmoset | Callithrix jacchus | YY1P3 |
 |
Mouse lemur | Microcebus murinus | YY1P3 |
 |
Chinese hamster | Cricetulus griseus | Yy1_1P1 |
 |
Rabbit | Oryctolagus cuniculus | YY1P3 |
 |
Pig | Sus scrofa | YY1P1 |
 |
Cow | Bos taurus | YY1P1 |
 |
Sheep | Ovis aries | YY1P1 |
 |
Dolphin | Tursiops truncatus | YY1P1 |
 |
Horse | Equus caballus | YY1P2 |
 |
Dog | Canis familiaris | YY1P1 |
 |
Panda | Ailuropoda melanoleuca | YY1P2 |
 |
Cat | Felis catus | YY1P2 |
 |
Pale spear-nosed bat | Phyllostomus discolor | YY1P1 |
 |
Velvety free-tailed bat | Molossus molossus | YY1P1 |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | YY1P1 |
 |
Mouse | Mus musculus | Without Homology |
 |
Rat | Rattus norvegicus | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >YY1P4 |
| CCTTGCTCTCATAGTGGCTGCGAAAAGATGTTCAGGGATTACGCCGCCATGAGAAAACATCTCCACATCCACGGGCCCAGAGTCCACGTATGTGCAGAATGTGGCAAAGCTTTCATTGAGAGCTCAAAGCTGAAACGACACCACCTGGTCCACACCGGCGAGAAGCCCTTCCAGTGCACATTCGAAGGCTGCGGGAAACGCTTTTCCCTTGATTTCAATTTGCGCACACACTTGCGCATCCACACCGGCGATAAGCCCTTCGTGTGCCCCTTCGATATCTGCAATAGGAAGTTCGCTCAGTCAACCAACCTGAAAACCCACATTTTAACGCATGTGAAGAGCAAAAACAGCCCGTGAAAAGGAGAAGACCCCTCTCAGACTTGGGAAGTATCTTCCAGGACTGCGGTAGGGAATAAATATGCCTCTCAAAGCTTTGTATGTTGTTTCTAAGAGTTTTAAAACACTGAATCCTACACATCTAAGGTTCGTGTTTTGTTAGAGTAGTA |
| >XM_005562202.2 |
| TCCCCACGGCCGGCCGCCTCCTCGCCCGCCCGCCCGCAGCCGAGGAGCCGAGGCCGCCGCGGCCGTGGCGGCGGAGCTCTCAGCCATGGCCTCGGGCGACACCCTCTACATCGCCACGGACGGCTCGGAGATGCCGGCCGAGATCGTGGAGCTGCACGAGATCGAGGTGGAGACCATCCCGGTGGAGACCATCGAGACCACAGTGGTGGGCgaggaggaggaggaggacgaagacgacgaggacggcggcggcggcgaccacggcggcgggggcggccacgggcacgccgGccaccaccaccaccaccatcaccaccaccaccaccCGCCCATGATCGCGCTGCAGCCGCTGGTTACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCAGACGCGCGAGGAGGTGGTGGGCGGCGACGACTCGGACGGGCTGCGCGCCGAGGACGGCTTCGAGGATCAGATCCTCATCCCGGTGCCCGCGCCGGCCGGCGGCGACGACGACTACATTGAGCAGACGCTGGTCACCGTggcggcggccggcaagagcggcggcggcggctcctcgtcgtcgggcggcggccgcgtcaagaagggcggcggcaagaagagcggcaagaagagttacctcagcggcggggccggcgcggcgggcggcggcggcgccgACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGACCCTGGAGGGCGAGTTCTCGGTCACCATGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACTGTGGTTGAAGAACAGATCATTGGCGAGAACTCACCTCCTGATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGGCATTGACCTCTCAGATCCCAAACAACTGGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCACGGCCCCAGAGTCCACGTCTGTGCAGAATGTGGCAAAGCCTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATGTGCGAATCCATACCGGAGACAGGCCCTATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACATGCTAAGGCCAAAAACAACCAGTGAAAAGAAGAGAGAAGACCCTTCTCGACCACGGGAAGCATCTTCCAGAAGTGTGATTGGGAATAAATATGCCTCTCCTTTGTATATTATTTCTAGGAAGAATTTTAAAAATGAATCCTACACACCTAAGGGACATGTTTTGATAAAGTAGTAAAAATTAAAAAAAAAAAAACTTTACTAAGATGACATTGCTAAGATGCTCTATCTTGCTCTGTAATCTCGTTTCAAAAACACAGTGTTTTTGTAAAGTGTGGTCCCAACAGGAGGACAATTCATGAACTTCGCATCAAAAGACAATTCTTTATACAACAGTGCTAAAAATGGGACTTCTTTTCACATTCTTATAAATATGAAGCTCACCTGTTGCTTACAATTTTTTTAATTTTGTATTTTCCAAGTGTGCATATTGTACACTTTTTTGGGGATATGCTTAGTAATGCTATGTGTGATTTTTCTGGAGGTTGATAACTTTGCTTGCAGTAGATTTTCTTTAAAAGAATGGGCAGTTACATGCATACTTCAAAAGTATTTTCCTGTAAAAAAAAAAAAAAGTTATATAGGTTTTGTTTGCTATCTTAATTTTGGTTGTATTCTTTGATGTTAACACATTTTGTATAATTGTATCGTATAGCTGTATTGAATCATGTAGTATCAAATATTAGATGTGATTTAATAGTGTTAATCAATTTAAACCCATTTTAGTCACTTTTTTTTTCCAAAAAATACTGCCAGATGCTGATGTTCAGTGTAATTTCTTTGCCTGTTCAGTTACAGAAAGTGGTGCTCAGTTGTAGAATGTATTGTACCTTTTAACACCTGATGTGTACATCCCATGTAACAGAAAGGGCAACAATAAAATAGCAATCCTAAAGCAAGAATATGGCAGAACAAGATCTGTAAGCACAGTCTTATTTTCTTTTGTTGTCCAGAATACTTATAATTCTTGAGCCTCCCAGAAATTGGAAGCTAAATAAAGCAACTCAAGTTTCCTTTATTTTGCACTCAATTACAGTGATTATTGATGAAAGCGATGCATGGATATTTTAATACTTCCTACATGTCCTGACATCCGAAGGAGAGTAGGTAACAGGCATCCCGAGTTCAGGAACTACCTCAGAACACCCCAGGCCAGGTTGGTCATAGGCTGTGATTTTAGCCCCCGGCAAGTGTGAGTGAAGCATCTACCACTGTGCAGCCTGAGCGCCTGTGCAAGGTAAGGTGCCACCTGGCAGTGGGGCACACAGAGGGAAGACCAGGCCTGTCCACTCTGCTGCCTTCAGAGGCAGCTCCAGCAGGGCCTTGGCTTGTCTTGACAGGAAATGCTTGTGGTCACTGGTTATTTGGTTTGAGAGCCCTTGTTCCTCCGTCTAGTGGAGTCCTTATTAAATACTAGCAATGTGGCAATTGAGTACCAGTAGCGTAATTTCATGTTTCTAAATGGACACTGGGTGCAAATCAGCAAGGTGATTAGATTATTAGAAAAATTGTGCTCAATGAGTACCTCTCACATTGTAACCTCTTAAATGTACAATTACAATGTTGGATCTTACGGTCAAATAACAGACTTGAGAATATTTTATAAACTGCCATGATACAGCAAAATCTCATTTATTCAAAGTGCAAACATACTGTGTCTTTCTGTTTTGTGTATGCTTGACTGCAAGATAAATGACAAACTAGCTAATATCCGAGATTTATTTACAAACGGCCAGGGACCCCATCAGGTGAAACACATAGCCCGATGTCTTAGAGCTTCTCCATCGGTCCCGTACAGGAGGGCTGGAGACCCAataacagtgaccctgtggctctggaattttgaagtgccttttgtgaatcatgaatgaaacatttaactTGAGACCCTTTAAAAAATTATCCAGAATCTGTTAGCCCTTGGGTAGTTTGGAACTCAGTTAAGCAGAAGCCCCCAGCTGTTTTCTGGGTAAGCCAGGCTTTGCTGTATCTGGCAGTCAGGAGAGAGGTCAGCCCATGGTGGAGGTCTTCAGTGCCGAGGGCTCGGATGAGAACGTGTCGTTCTTTGACTTCGACCTGGGCAGGGGCTTCTATGGATGCCTGCTTTGTGAGCACCCACACCTTCCCTCCCCACTGTCGGGTTGAGTAGCCCCAGCATGGCTGTGTTAGGAGTCCTTTGCCCAGCATTGTGCTGCACTGGAGCCTGGCCCTGGCACTGTCCTCAGGACCTTGCCCAAGGGCCCACCGCAGAGCATACCTATGTTATGGGGAGCCCCGCTGGCAGCCCCGAGAGCCATGCCACGGCCTGCAGAAGCCAGGCTCCTGTGTGGATGAAGTCCCTCTTCCTCTGTGCCTTGATCCCTTGGGGGTGCCTTTGGTCATCTCTTCCGTCCTTTCCTGTCTCTGAAGTAGTCATCACTCCCCTTGACTCTCTCTGTTCACATGTCTTCTCAGTCTGCAGAGTTAACTTCTGTAAGGAGTTTAATCTGGGGTTCCAGGAAAACAAGTTCCTTGTTAACATAGCACTGACTTTGCAACAATAGGAAACTAACAAATGAGCAACAATATAAAGAGTAGAGGTAGTTCTCATTGGGTGTAACTTCAACCCATTCTGCTTGTGGTTAGAATTTATAACTTTGCTAACGATGTAATTTACTAAGGTTTGAAATGGTGTTCTAACAGCGAGTCCATTGTCTTGAGGATTAATCTGATTTATAAGTAATACTGATAGACATATTTTCGTACATCTGAGCAGAAATAAATGCATGTTTCTAGCATATGTAATATAAAAACTCCAGAGGATAAGTTTACACTTAACAAGATGTTGTTTTCTATTTTTGAATTTCTTATTATTTCCCCCTTTTTGGTAGTGGGGTTGAGAGGGGGAGCATACTATTTGTATAAAGAACTGTCACCCCAGAGTGACATTTATTTTCCAAGATGACCCTGAACTCATGCTATTGGTTACATATGGTGTTTGTGTGCTTTGCCTAGTTTCAAGGCCTGAGGACTTGAGGAAAATCGGGATTTTTAAATTTTCTTTTTGGTTTTCATGTAAAAGGTCTAAATGTCACTTATTTTGCTAAATAAGACCCTTTCACAGGATAGCGTGCACAATGCCTGTCCATGTTTCCAAGCAGAGTTCAAGTTCGTGTCTTCACAAGTAGATAAGAATCACTTCCAGTCGGGGGAAGCCTCCCTGAGCAGTGTTTGAGAGTTCGTACATTGGAGAACTGCCCCCCGTCCGTTTGCACTCTGCCTTGCAAAACTTACTGTGGAGACGTGCTCCAGATTGGTCTCAGACCGGAGTTTATGTTTGCGGCACAGGAAAACCTGACCTCCTAAAAGAAGTGTTTGAATTGGAAACCTGATAATTGTACCCACCTCCCACCCCCACTAGAGGCAGAGAGAGTTGATCGCTTCCAGGGTCTCTGACTTCTGTGACCTGGAAATCAGCCTGGCTTGGGATATTCATGTTGTTGATCTTTAATTCTTTAAGTTTCTTCTATTTTCTTGACATCGGATCCCCAGCAAGAGTAAGGATATCAGAGGTGAAAACTGGTGAGGGCCAGGCTGCTCACAGACACCTACTTGATGCCACAGCCATGCCATGAGGCTTCCTCCTAGCTGCTCTGCTGGCTTGCTGAAGCCAACTCTGAGTCACGGGGTTGCCTTGGACCCTCGGCTGTAGGGGGCAACTGTCTGGCTCCGGGCCCTTTGTCTTGGATCCACTGACAGTAATGTGATCGCAGCACTTCTTCAGAGTTCAGGCCCAGCAGGTCCTGGCAAGTGCATTCTACTCGAACTTTTAACCCAAGTGGTGGGGAAGGAAGTCGAAACCCCAACCTGCACTTTCTTGGGGTTCTGGCCGTGCACTTCTTAGCCTGCTCTCTGACTTTACAGGACAAAAGGTACCCTACGCCTTCTTCAGAATCATACTTACCTGCACGGCGGCATCTGACTGGATGGCTGGCTAGGTCTCATTCACCCCATATTACTGACCCTTGATTTATGTTGTTACTGCTCAGGTTATGCTCAGATGCCCTGGTTGCCTGAAGATGGTTTAAGTGCAGGCCCTTCAGACAAGTCACGTCAGGCAGGAGAGGGCTGGCCTCTAACCCACAAGAGGGCAGATTTTGTGGCCAAGAGGCTTCCTGGCATCCACCCCAGGCCCGAGGGATCAGTGTGGTGCCAGAGAGGATCTTTAAGCTGGGACTGTATTGAGGGTTGATAGGAAGTATGGGCAGCAGGTACTTGACACATATCACCCAGTCCCCTTATAAAATCTGGAACGGAGCCTTTAAGTTGAGCGTTAGCATCAGGTCAGCAGGCAAAGCAAACCTCCCACAAACTGGGTGCTGTAAGGCGGGAGTTGACACATGGAGAGCTTGGTCCTGGCTGAGCAGGCACCCAGCCCCATGTTCCCCGCCAGCATTCTGGATGTCAGAGGAGACTGTGTATGATAGCGTCACATTCACCTGAAGCACACTGATTTTCCACAGGTGTGGCAAGTTCGATCAAATTGACCACTTTTCATGAGACACCCAGACGCTGTAAAAAACTACCGGGATGTGTTGAGGGGGCAGTTTGCCATGCTCTGTTCTATCTGCTGCTATCTCTGGGGGCCGCATAATGTCCACACACATCATGGAGGGGAGAAAGGCATCAGTACCAAACGGAGTAACCTCTTTTTTCTACAATGTCCATACCCAACATGTGAGGCTATATTATCAACAGGTGGTGAGAAAAATTCTGTTTTTATTCGCTTTCTGGTAACTTCTGTAGGCCCTGGCTCAAGGACTTAGCATTTCGTCTCATGTACATCTTTTTCTTAAGTGTTCTTTGCCATTTCTGGAATTGTCCTTGGTTTTTCCTTAGCTCATAGGTCATAGATGCAGAAATATAGTATTTAAGGCATCCGCATCCAGCATCAGATGGCTTTGCATCCAGAAAAACATTGATAACTCAGTTTGAAGCACCAAGCATGTGTAATATGGCTCTATAAAATATAATAAATGCATAATGTTAAGCTTT 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