| Retrocopy Name | RPSAP70 |
|
| Species | Callithrix jacchus | |
| Coordinates | chrX:51867426-51868005 UCSC | |
| Strand | + | |
| Parental Sequence | XM_017965964.2 | |
| Parental seq. overlap | 488 bp | |
| Parental seq. overlap (%) | 41.9% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | RPSAP70, located on chrX:51867426-51868005, is a retrocopy of the parental gene RPSA. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | RPSA |
| Full Name | N/A |
| Also known as | - |
| Coordinate | chr17:70506604-70513172 |
| Strand | + |
| Gene summary | N/A |
| Species | Scientific Name | Retrocopy | |
 |
Human | Homo sapiens | RPSAP62 |
 |
Chimpanzee | Pan troglodytes | RPSAP65 |
 |
Bonobo | Pan paniscus | RPSAP66 |
 |
Gorilla | Gorilla gorilla | RPSAP65 |
 |
Orangutan | Pongo abelii | RPSAP67 |
 |
Gibbon | Nomascus leucogenys | RPSAP66 |
 |
Green monkey | Chlorocebus sabaeus | RPSAP56 |
 |
Crab-eating macaque | Macaca fascicularis | RPSAP62 |
 |
Rhesus | Macaca mulatta | RPSAP63 |
 |
Baboon | Papio anubis | RPSAP57 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | RPSAP34 |
 |
Mouse lemur | Microcebus murinus | RPSAP43 |
 |
Pig | Sus scrofa | RPSAP27 |
 |
Dolphin | Tursiops truncatus | RPSAP39 |
 |
Horse | Equus caballus | RPSAP37 |
 |
Dog | Canis familiaris | RPSAP48 |
 |
Panda | Ailuropoda melanoleuca | RPSAP46 |
 |
Cat | Felis catus | RPSAP54 |
 |
Velvety free-tailed bat | Molossus molossus | RPSAP10 |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | RPSAP2 |
 |
Egyptian rousette | Rousettus aegyptiacus | RPSAP22 |
 |
Mouse | Mus musculus | Without Homology |
 |
Rat | Rattus norvegicus | Without Homology |
 |
Chinese hamster | Cricetulus griseus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Cow | Bos taurus | Without Homology |
 |
Sheep | Ovis aries | Without Homology |
 |
Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >RPSAP70 |
| CTGCCATTGTTGCCATTGAAACTCCAACTGATGCTTAGCATTATATCTTCCAGGAATACTGGCCAGTGGTCTGGCTAAAGTTTGCTGTTTCCACTAGGGTCACTCTTATTGCTGGGAGCTTCACTCCTAGAACTTTCACTAACCAGATCCAGGCAGCCTTCCAGGAGCCACGTCTGCTGGTGGTTACTGATCCCAGGGCTGACCACTAGCTTCTTACAGAGGCATCTTATATTAACTTGCCTACCATTGCTCTGGGTCACATAGAGTCTCCCCTGCCCTGTGTGGACACTGCCATCCCTCAACAGGAGAGCTCCCTCAGGGGGTCTGGTGGAGTGGATGCTGCCCCAGAAGGTTCTGCGGGAGTGTGGTACCACATCCTGTGAACACCCATGAGAGTCATGCCTGATCTCTATTTCTGCAGAGATCTTGAAAAGATTGAAAAGGAAGAGCAGGCTGCTGCTGAAAAGGCTGTGACCAAGGAGAAACTTCAGGGTGAATGGACTGCGTCAGCTCCAGAGTCTGCTGCTATTCAACCTGAGGGTGCAGACTGGTCTGAAGGCGTGCAGGTGCCCTTTGTGCC |
| >XM_017965964.2 |
| CTGACAACGGAGTATATAATAACGTCACTTCCTGCGGCCTGTCCTTTCCGCGCTACCTGCCGAGGGCTCCAAACGGCGTTGTTCTGGattcccGTCGTAACTTAAAGGGAAACTTTCACGATGTCCGGAGCCCTCGATGTCCTGCAAATGAAGGAGGAGGATGTCCTTAAGTTCCTGGCAGCAGGAACCCACTTAGGTGGCACCAACCTTGACTTCCAGATGGAGCAGTatatctataaaaggaaaagtgatgGCATCTACATCATAAATCTGAAGAGGACCTGGGAGAAGCTTCTCCTGGCAGCTCGTGCCATTGTTGCCATTGAAAACCCTGCTGATGTCAGTGTTATATCTTCCAGGAATACTGGCCAGAGGGCTGTGCTGAAGTTTGCTGCTGCCACTGGAGCCACTCCAATTGCTGGCCGCTTTACTCCTGGAACCTTCACTAACCAGATCCAGGCAGCCTTCCGGGAGCCACGGCTGCTTGTGGTCACTGACCCAAGGGCTGACCACCAGCCTCTCACGGAGGCGTCTTATGTCAACCTACCTACCATTGCTCTGTGTAACACAGATTCTCCTCTGCGCTATGTGGACATTGCCATCCCATGCAACAACAAGGGAGCTCACTCAGTGGGTTTGATGTGGTGGATGCTGGCTCGGGAAGTTTTGCGCATGCGTGGCACCATTTCCCGTGAACACCCGTGGGAGGTCATGCCTGATCTCTACTTCTACAGAGATCCTGAAGAGattgaaaaagaagagcaggctgCTGCTGAGAAGGCTGTGACCAAGGAGGAATTTCAGGGCGAATGGActgctccagctcctgagttcaCTGCTACTCAGCCTGAGGTTGCCGACTGGTCTGAAGGCGTGCAGGTGCCCTCTGTGCCCATCCAGCAGTTCCCTACTGAAGACTGGAGCGCCCAGCCTGCCACGGAAGACTGGTCTGCAGCTCCTACTGCTCAGGCCACTGAATGGGTAGGAGCAACCACTGAATGGTCTTAAGCTGTTCTTGTGTGGCCTCTTAAACGACATGTAAGattcatggaaaataaacatcgAGTTTCTAAAAGTTgtgatttattttggttttttattccagatcagaatagctgggatttcatATCAAAGTATAACAATAAATACATGTCTTGACATGAA |
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