| Retrocopy Name | Klhl13P1 |
|
| Species | Rattus norvegicus | |
| Coordinates | chr5:107323907-107325557 UCSC | |
| Strand | + | |
| Parental Sequence | XM_017602373.1 | |
| Parental seq. overlap | 1372 bp | |
| Parental seq. overlap (%) | 42.2% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Klhl13P1, located on chr5:107323907-107325557, is a retrocopy of the parental gene Klhl13. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Klhl13 |
| Full Name | kelch-like family member 13 |
| Also known as | - |
| Coordinate | chrX:121578965-121735014 |
| Strand | - |
| Gene summary | Predicted to enable cullin family protein binding activity and protein N-terminus binding activity. Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in protein ubiquitination and regulation of cytokinesis. Predicted to be part of Cul3-RING ubiquitin ligase complex. Predicted to be active in midbody. Orthologous to human KLHL13 (kelch like family member 13). [provided by Alliance of Genome Resources, Apr 2022] |
| >Klhl13P1 |
| CCATGATGGCGTCTGCCAGTGATTATTTCAAGGCCATGTTCACAGGAGGAATGAAGGAGAAAGATCTAATGTGCATTAAGCTTCATGGGGTGAACAAAGTTGGTCTGAAGAAAATCATTGATTTTATTTATACTGCAAAACTCTCTCTCAATATGGACAATCTTCAGGATACTCTTGAGGCTGCCAGCTTTCTACAGATCTTGCCGGTTTTGGATTTTTGTAAAGTATTTCTTATATCTGGTGTCTCCTTAGATAACTGTGTTGAGGTTGGACGGATTGCTAACACCTACAATCTTATAGAAGTGGATAAATACGTAAATAATTTCATCCTGAAGAACTTTCCTGCCTTGTTGAGTACCGGGGAGTTTCTAAAACTCCCCTTTGAACGGCTTGCCTTTGTGCTTTCCAGCAATAGTCTCAAGCACTGTTCTGAACTTGAACTCTTCAAGGCAGCCTGCCGCTGGTTGAGGCTGGAAGACCCTCGGATGGACTATGCTGCAAAATTAATGAAGAATATTCGCTTCCCACTGATGACGCCACAGGATCTCATCAACTATGTGCAGACAGTAGATTTCATGAGAACTGACAATACCTGTGTGAATTTACTTTTGGAAGCAAGCAATTACCAAATGATGCCATATATGCAGCCAGTGATGCAGTCAGACAGAACTGCCATTCGATCAGATTCTACTCATTTGGTTACGTTAGGAGGAGTTTTGAGGCAACAGCTGGTTGTAAGTAAAGAGTTACGGATGTACGACGAAAGGGCGCAGGAGTGGAAATCGTTAGCCCCTATGGATGCTCCTCGATACCAGCACGGCATTGCTGTTATTGGAAACTTCCTTTATGTAGTTGGTGGTCAGAGTAATTATGACACAAAAGGAAAAACTGCTGTTGATACAGTCTTCAGATTTGATCCTCGTTATAATAAGTGGATGCAGGTGGCATCATTAAACGAAAAGCGCACATTTTTTCACCTGAGTGCACTCAAAGGACATTTATATGCAGTTGGTGGACGCAGTGCAGCTGGTGAACTGGCCACAGTAGAATGTTACAACCCAAGAATGAATGAATGGAGCTATGTTGCAAAAATGAGTGAACCCCACTATGGCCATGCTGGAACAGTATATGGGGGTTTAATGTATATATCCGGAGGAATTACCCATGACACTTTCCAAAATGAGCTCATGTGTTTTGACCCAGATACAGACAAATGGACACAGAAGGCTCCTATGACTACAGTCCGAGGTCTGCATTGCATGTGTACAGTTGGAGACAAGCTGTATGTCATTGGTGGCAACCATTTCAGAGGAACAAGTGATTATGATGATGTCCTAAGCTGCGAATACTATTCGCCAACTCTTGACCAGTGGACACCAATTGCTGCTATGCTAAGAGGTCAGAGTGATGTTGGAGTTGCGGTCTTCGAAAACAAAATCTACGTTGTTGGTGGATATTCTTGGAATAACCGCTGCATGGTAGAAATTGTCCAGAAATATGACCCAGAAAAAGATGAGTGGCATAAAGTTTTTGATCTTCCAGAGTCACTTGGTGGCATTCGGGCTTGCACTCTCACAGTTTTTCCACCTGAAGAAAACCCTGGGTCACCTTCTAGAGAATCACCTCTTTCAGCACCTTCAGATCATTCTTA |
| >XM_017602373.1 |
| AATGTATTCTGAGTAGGGGACAGTGCGATTTGAAGGAGGTACCTTGCATTCCTATTGCACAGATTGGAGGCGTCGGTTTAAGGGCACTGGCAGGATCTTTTGCTTGTTCTCGGCGGCTGCTGTGTCGGTCCACTGTGGAATGGAAGTGTTAGTTGTTAGTCTGTTATGGAAACGCTGTTTACTGTTATCGTAGTACCGTGGTGACAACATGCCATTGAAATGGAAAACGAGCTCTCCTGCTAGCTGGAAATTCCCAGTTCCTGTACTTAAAACATCCAGGTCAACTCCACTTTCTCCAGCATACATATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTCTTCCCATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATCTTTACCAGCAACAGCCACAGTTCTGTGGTGTTACAGGGATTTGACCAGCTTCGGCTTGATGGATTGCTTTGTGACGTGACACTGATGCCAGGTGATACAGATGATGCCTATCCTGTGCACCGAGTCATGATGGCCTCTGCTAGTGACTACTTCAAAGCTATGTTTACCGGTGGAATGAAAGAACAAGAGTTAATGTGCATTAAGCTTCATGGCGTGAGCAGAGTGGGTCTAAGGAAAATTATTGACTTCATCTATACTGCAAAGCTTTCTCTCAACATGGACACCCTTCAAGATACACTGGAAGCTGCCAGCTTTCTTCAGATTCTGCCGGTTTTAGACTTCTGCAAAGTATTTCTCATATCTGGGGTCACTTTGGATAACTGTGTTGAAGTTGGACGGATTGCCAACACCTACCATCTGACAGAAGTGGATAAATATGTCAACAGCTTCGTCTTAAAGAATTTTGCTGCATTGCTGAGTACCGGGGAGTTCCTGAAGCTTCCCTTTGAGCGCCTTGCCTTTGTGCTTTCCAGCAACAGCCTTAAGCGCTGCACCGAACTCGAGCTCTTCAAAGCTACCTGCCGTTGGCTTCGCCTGGAAGAACCTAGAATGGACGTTGCTGCAAAACTAATGAAGAACATACGATTCCCGCTGATGACACCACAGGAGCTGATTAATTATGTGCAAACGGTGGATTTCATGAGAACTGACAATACTTGTGTCAATTTGCTTCTGGAAGCCAGCAATTACCAAATGATGCCGTTTATGCAGCCAGTTATGCAGTCAGACAGGACTGCCATTCGGTCTGACACCACTCATTTGGTCACACTCGGAGGAGTCCTGAGGCAGCAGCTTGTCGTCAGTAAAGAATTGCGCATGTATGATGAAAAGACCCACGAGTGGAAATCTCTAGCCCCCATGGATGCCCCAAGATACCAGCATGGCATTGCTGTCATCGGAAATTTTCTCTATGTTGTTGGTGGGCAGAGTAATTATGACACAAAAGGAAAAACGGCCGTCGACACAGTGTTTAGATTTGATCCTCGATACAACAAGTGGATCCAAGTTGCATCTTTAAATGAAAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATGCAGTCGGTGGGCGAAATGCAGCTGGAGAACTACCTACTGTCGAGTGTTACAATCCAAGAACAAATGAATGGACCTACGTTGCCAAAATGAATGAGCCTCACTATGGACATGCTGGAACTGTGTATGGAGGAGTGATGTATATTTCAGGAGGAATTACCCATGACACTTTCCAAAAGGAACTCATGTGCTTCGACCCTGATACTGACAAATGGATCCAGAAGGCTCCAATGACCACTGTCCGAGGCCTACACTGCATGTGTACAGTAGGGGATAGGCTCTATGTCATTGGTGGCAACCATTTCCGAGGAACCAGTGATTACGATGATGTCCTGAGCTGTGAATACTATTCACCTATCCTTGACCAGTGGACCCCAATTGCTTCCATGCTAAGAGGGCAGAGCGATGTTGGGGTCGCTGTCTTTGAGAATAAAATCTATGTGGTTGGTGGATATTCATGGAATAATCGCTGTATGGTAGAGATAGTGCAGAAGTATGATCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCTGCCAGAGTCCCTTGGTGGTATTCGAGCCTGTACACTTACGGTTTATCCACCTGAAGAAAATACTCCATCACCTTCTAGAGAGTCCCCTCTTTCTGGACCCTAAGATCATCCTTACAGTTAAGATGCTATATTCCTATCTTTGCAATGTGTCATGATTCTCTTCTTTCCCCCCCCCCTTAAGTAGTATATATGTTAGAATTAGCATCCAGTAATTGATACAGATAATGGAAAAAAAATTGACATTGATGTTACTTGTGCTATTTGTATGGCCTAGAATGTTTATAAAGTGGTAACAACCCATCCTCGAAATATATCCCATAGAAGCTGATGTTTAACATTGAAAACAAAAAAAAGTATTGTCTACAAGCTGTTCCTTCAGTACTTTTTAAATGCTGTGTACTGAGTGTAAGGTATTCATCATCTTACATTATAAGCCAAGTCAGAGGTGGATTGTAGTAAACGTACAACTGTGCACACTAGGCTTCAAAGTAAAGTTTTCCTTTCATCTGTAACTGTAAAATGTCAAAGGGAGGCAGCCTGCTCCAACAGGAAACAATACACAAACGGTTGTCAACTCGCATGAGCTACCTCCCTCTTTTCATACAGTATTTTTGACACATCTGTCAACCCACCCGAATATGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACACACAGGAGAAATAACTGAAATTCACCAACACTAGTTAGGGGGAAAGCATGACCCCTCTGCTTCTAAGAATTGGTTTGGGGTTTTTTAAGTGTGTATAGATAAACACACACATACTTCTATCAAACACAAATTTTTAAAAATTGAGTGTCAGGTCAAATAAATGTGAAATTAAAATAAATTCTTCGAAAAAGCAGCTTCCATGAACAATGGGGATTCAGTATGCACACATTAAATGCATATATTTGGAACCATACTGAATTTAGGTGGATAAGGGCTAGAAATTTTGAGCAACTAAATTTATCACTTGACCAAATTTTATCTTAAAGAATTACATTCTCTTTTTCTCCTTTGCTGTTGAGGTAACTTACCTGTTCTGTGTATTCTGTATTCTGTACACTCTTGGTTCATGAGGTTATTTAGCACAAAGTGTAACAGCTTCGCCTGGGAAGCTGCTTTTGCTCTATGATGTCCATGGTTTCCCTTTTATTCAATAAAAACATTTAAT |
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