| Retrocopy Name | Nr2f6P2 |
|
| Species | Rattus norvegicus | |
| Coordinates | chr2:5578983-5579166 UCSC | |
| Strand | - | |
| Parental Sequence | NM_139113.1 | |
| Parental seq. overlap | 155 bp | |
| Parental seq. overlap (%) | 8.8% | |
| Genomic Region |
Intragenic (Nr2f1) |
|
| Retrocopy Summary | Nr2f6P2, located on chr2:5578983-5579166, is a retrocopy of the parental gene Nr2f6. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Nr2f6 |
| Full Name | nuclear receptor subfamily 2, group F, member 6 |
| Also known as | - |
| Coordinate | chr16:19769968-19777414 |
| Strand | - |
| Gene summary | Enables DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human NR2F6 (nuclear receptor subfamily 2 group F member 6). [provided by Alliance of Genome Resources, Apr 2022] |
| Species | Scientific Name | Retrocopy | |
 |
Human | Homo sapiens | NR2F6P1 |
 |
Chimpanzee | Pan troglodytes | NR2F6P1 |
 |
Bonobo | Pan paniscus | NR2F6P1 |
 |
Gorilla | Gorilla gorilla | NR2F6P1 |
 |
Orangutan | Pongo abelii | NR2F6P1 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | NR2F6P1 |
 |
Marmoset | Callithrix jacchus | NR2F6P1 |
 |
Mouse lemur | Microcebus murinus | NR2F6P2 |
 |
Mouse | Mus musculus | Nr2f6P2 |
 |
Chinese hamster | Cricetulus griseus | Nr2f6_1P1 |
 |
Pig | Sus scrofa | NR2F6P1 |
 |
Sheep | Ovis aries | NR2F6P1 |
 |
Dolphin | Tursiops truncatus | NR2F6P2 |
 |
Horse | Equus caballus | NR2F6P2 |
 |
Dog | Canis familiaris | NR2F6P1 |
 |
Panda | Ailuropoda melanoleuca | NR2F6P1 |
 |
Chicken | Gallus gallus | NR2F6P1 |
 |
Budgerigar | Melopsittacus undulatus | LOC101874725P1 |
 |
Gibbon | Nomascus leucogenys | Without Homology |
 |
Green monkey | Chlorocebus sabaeus | Without Homology |
 |
Crab-eating macaque | Macaca fascicularis | Without Homology |
 |
Rhesus | Macaca mulatta | Without Homology |
 |
Baboon | Papio anubis | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Cow | Bos taurus | Without Homology |
 |
Cat | Felis catus | Without Homology |
 |
Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
 |
Velvety free-tailed bat | Molossus molossus | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
 |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >Nr2f6P2 |
| TGCGTGGTGTGCGGGGACAAGTCGAGCGGCAAGCACTACGGCCAATTCACCTGCGAGGGCTGCAAAAGTTTCTTCAAGAGGAGCGTCCGCAGGAACTTAACTTACACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCACCGCAACCAGTGCCAATACTGCCGCCTCAAGAAGTGCC |
| >NM_139113.1 |
| GTTGGCCTGGAACCGGCCCGACCAGTTCCTGCCTGGCGCGCGGACCGGCCGCAGGAAGTTGCCGCAAAACTTTTTTTGGGGGGGTGCGACCGGAGCCCCCGAGCGCGCGGGCTGCATGCGCCCGGGATAGCCGGGTTCCCCTCGGGTCGCCAGGCGTGCCCAGAGGGGACGGACTCGTCCCGGGGCGCCCCGGCCCCGCTGTCCCCGGGGCTATGGCCATGGTGACCGGTGGCTGGGGCGGCCCCGGAGGCGACACGAACGGCGTGGACAAGGCAGGTGGGAGCTACCCACGCGCGACCGAGGACGACTCGGCCTCGCCTCCCGGGGCGACTAGCGACGCGGAGCCGGGTGACGAGGAGCGTCCGGGGCTGCAGGTGGACTGCGTGGTGTGCGGGGACAAGTCCAGCGGCAAGCACTACGGCGTGTTCACCTGCGAGGGCTGCAAGAGTTTCTTCAAGCGCAGCATCCGCCGCAATCTCAGCTACACCTGCCGGTCCAACCGTGACTGTCAGATTGATCAGCATCACCGGAACCAGTGTCAGTACTGTCGCCTCAAGAAGTGCTTCCGGGTGGGCATGCGCAAGGAGGCGGTGCAGCGCGGccgcatcccgcacgctctcccgggtcccgcggcctgcagcccTCCGGGCGCGGCGGGAGTCGAGCCGTTCGCGGGGCCGCCGGTGTCCGAGCTGATCGCGCAGCTGCTGCGCGCTGAGCCCTACCCCGCGGCTGGGCGCTTTGGTGGCGGCGGCGCCGTGCTGGGCATCGACAACGTGTGCGAGCTGGCGGCGCGCCTACTGTTCAGCACGGTCGAGTGGGCCCGCCACGCGCCCTTCTTCCCGGAGCTGCCGGCCGCCGACCAGGTGGCGCTGCTGCGGCTCAGCTGGAGCGAGCTGTTCGTGCTGAACGCGGCGCAGGCGGCGCTACCGCTGCACACGGCACCGCTGCTGGCTGCCGCGGGGCTGCACGCCGCGCCCATGGCTGCGGAGCGCGCGGTGGCCTTCATGGACCAGGTGCGTGCCTTCCAGGAGCAGGTGGACAAGCTGGGCCGCCTGCAGGTGGATGCTGCCGAGTACGGCTGCCTCAAGGCCATCGCGCTCTTCACGCCTGATGCCTGTGGCCTTTCTGACCCAGCCCATGTTGAGAGCCTGCAGGAGAAGGCACAGGTGGCCCTCACCGAGTATGTCCGTGCCCAGTACCCATCACAGCCCCAGCGCTTTGGACGCCTGCTGCTGCGGCTGCCGGCCCTGCGTGCTGTGCCTGCATCCCTCATCTCCCAGCTTTTCTTCATGCGCCTGGTGGGCAAGACACCCATCGAGACGCTCATCCGGGACATGCTTCTGTCAGGGAGCACCTTTAACTGGCCCTATGGCTCGGGCTAGTGATGGTCCTTTCCAGGACACATGGAAGCTGGGGCCTTGTAGGGACCATGGGGACCAGGGCCCCAGCTTCTCTTCTGAGACTGACTTCTTTTTTTAAAGACTGTGAAATGTTTGGTTTGGTTTGTTTTTTAAATAATCATGAAACCAAAAAGATTCGGATCTCCCAGGCTCCAGCTTTGTCCTGGCAGCCCTTCGGCAGGGTGGGGCTGAGGGTCTGGAGCCAGCATGCTAGTGCCTCTGGTCCTGGGTATCTGGAAGGGCCACTGCAGCTGGGCAGGGGTGCTATGGGCCAGGAGGGTCCCCTGGACACATGGCCCATGGAGGGAACCATGAAATCATGGCCAACAATAAAGATATTCCCATCCTT |
| PMID - Link | Title |
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