| Retrocopy Name | Nr2f6P1 |
|
| Species | Mus musculus | |
| Coordinates | chr7:70009660-70009843 UCSC | |
| Strand | - | |
| Parental Sequence | NM_010150.2 | |
| Parental seq. overlap | 154 bp | |
| Parental seq. overlap (%) | 6.9% | |
| Genomic Region |
Intragenic (Nr2f2) |
|
| Retrocopy Summary | Nr2f6P1, located on chr7:70009660-70009843, is a retrocopy of the parental gene Nr2f6. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Nr2f6 |
| Full Name | nuclear receptor subfamily 2, group F, member 6 |
| Also known as | COUP-TF3|EAR2|Erbal2 |
| Coordinate | chr8:71826762-71834922 |
| Strand | - |
| Gene summary | Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within detection of temperature stimulus involved in sensory perception of pain; entrainment of circadian clock by photoperiod; and neuron development. Predicted to be located in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; hemolymphoid system; and sensory organ. Orthologous to human NR2F6 (nuclear receptor subfamily 2 group F member 6). [provided by Alliance of Genome Resources, Apr 2022] |
| >Nr2f6P1 |
| TGCGTGGTGTGCGGGGACAAGTCGAGCGGCAAGCACTACGGCCAGTTCACGTGCGAGGGCTGCAAGAGCTTCTTCAAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGCCAACCGGAACTGTCCCATCGACCAGCACCACCGCAACCAGTGCCAGTACTGCCGCCTCAAAAAGTGCC |
| >NM_010150.2 |
| ggcGCCGATGGAACGCGGGTGTCAGGCCGGCCGCAGCGCGGGGCCGGCGGCGAGCGCCAGGGCGAGGCCGAGGCTCGGGCCCAGGCGCAGGCCGAGGCCGGCCGCGCGAGCGCTCGGCGGGGAGACGATCCAGGGAAGGCCGCGGGTCGCACTCTCCACTCAGCTCTATCGCCTGGACCTCTGCGATTACGGCCGGGCGCGCGCGGCGTGCGGGACTCCGGGTCTCCGACGCGCGCTCCCGCCGCCCCTCCCCCCTCGCCGCGTAACTTGCGGCCAAAGTTTCCCCCCGGGCTCGGGGGCGCCCGCGCGCGCTCGGATGGTGAGCCACTAAGTTGGCCTGGGCGGCGGGGCCGGGCCATGGCCCCCGCGACGCTACCGGGTCCCCAGGACTCCGGACCACGGGACCTGGGCGCCCCAGACTCGCGCCTCTAGCGCGCCCCCGTCGACCGCGGGCACGCGTGGGAAAGTTGGCCTGGAACCGGCCCGACCAGTTCCTGCCTGGCGCGCGGACCGGCCGCAGGAAGTTGCCGCAAAACTTTTTTCAGGGGGGTGTGCGACCGGAGCCCCCCGAGAGCGCGGGCTGCATGCGCCCGGGGTAGCCGGGTCCCTCTCGGGTCGCCAGGCGTGCCCAGAGGGGACGGACTCGTCCCGGGGCGTACCGGCCCCGCTGTCTCCGGGGCTATGGCCATGGTGACCGGTGGCTGGGGCGACCCCGGAGGCGACACGAACGGCGTGGACAAGGCTGGTGGGAGCTACCCACGCGCGACCGAGGACGATTCGGCGTCACCTCCCGGGGCGACCAGCGACGCGGAGCCGGGCGACGAGGAGCGTCCGGGGTTGCAGGTGGACTGCGTGGTGTGCGGGGACAAGTCCAGTGGAAAGCATTACGGCGTGTTCACCTGCGAGGGCTGCAAGAGTTTCTTCAAGCGCAGCATCCGCCGCAATCTCAGCTACACCTGCCGGTCCAACCGTGACTGTCAGATTGATCAGCACCACCGGAACCAGTGTCAGTACTGTCGGCTCAAGAAGTGCTTCCGGGTGGGCATGCGCAAGGAGGCCGTGCAGCGAGGCCGCATCCCGCATGCGCTCCCCGGTCCAGCGGCCTGCAGTCCCCCGGGCGCGACGGGCGTCGAACCTTTCACGGGGCCGCCAGTGTCCGAGCTGATTGCGCAGCTGCTGCGTGCTGAGCCCTACCCCGCGGCCGGACGCTTTGGTGGCGGCGGCGCTGTACTGGGCATCGACAACGTGTGCGAGTTGGCGGCACGCCTGCTGTTCAGCACGGTCGAGTGGGCCCGCCACGCGCCCTTCTTCCCCGAGCTGCCGGCCGCCGACCAGGTGGCGCTGCTGCGGCTCAGCTGGAGTGAGCTCTTCGTGCTGAACGCGGCGCAGGCGGCGCTGCCGCTGCATACGGCACCGCTGCTGGCCGCCGCGGGGTTGCATGCCGCGCCCATGGCAGCCGAGCGGGCCGTGGCCTTCATGGACCAGGTGCGTGCCTTCCAGGAGCAGGTGGACAAGCTGGGCCGCCTGCAGGTGGATGCTGCGGAGTACGGCTGCCTCAAGGCCATCGCGCTCTTCACGCCTGatGCCTGTGGCCTTTCTGACCCAGCCCATGTGGAGAGCCTGCAGGAGAAGGCACAGGTGGCCCTCACCGAGTATGTGCGTGCCCAGTACCCATCGCAGCCCCAGCGCTTTGGGCGTCTGCTGCTGCGGCTGCCAGCCCTGCGTGCTGTGCCCGCATCCCTCATCTCCCAGCTCTTCTTCATGCGCCTGGTGGGCAAGACACCCATCGAGACCCTCATCCGGGACATGCTTCTGTCAGGGAGCACCTTTAACTGGCCCTATGGCTCGGGCTAGTGATAGTCACCTTCCAGGACATACATGGAAACTGGGGCCTTGTGGGGACCCTGGGGATCAGGGCCCCAGCTTCTCTTTTgagactgatttctttttttaaagactgtgaaatgtttgttttgttttattttttaaataatcatgAAACCAAAAAGATTTGGATCTCCCAGGCCTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGCTAGGCAGGAGTACTATGGGCCAGGAGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATAAAGGTATTCCCTTACTTGGTC |
| PMID - Link | Title |
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