Retrocopy Name | DDI2P1 |
|
Species | Ailuropoda melanoleuca | |
Coordinates | chr8:1878642-1879133 UCSC | |
Strand | + | |
Parental Sequence | XM_011227688.3 | |
Parental seq. overlap | 401 bp | |
Parental seq. overlap (%) | 4% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | DDI2P1, located on chr8:1878642-1879133, is a retrocopy of the parental gene DDI2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | DDI2 |
Full Name | N/A |
Also known as | - |
Coordinate | chr11:11224569-11265852 |
Strand | + |
Gene summary | N/A |
>DDI2P1 |
CGACCCCTTTGATTTGGAGGCTCAGGCCAAGATAGAGGAAGAAATCCGGCAGCAGAACGTCGAGGAAAACATGAGCATCGCGATGGAAGAGGCCCCGGAGAGCTTCGGACAAGTAACCATGCTCTATATCAACTGCAAGGTGAACGGGCATCCGCTGAAGGCTTTCGTGGACTCCGGGGCCCAGATGACCATCATGGGACAAGCATGCGCCGAGAGATGTAACATAATGCGGCTGGTGGACCGCCGCTGGGCTGGGACTGCCAAGGGGGTGGGCACGCAGAGAATTATTGGCCGGGTCCATCTAGCCCAGATTCAGATAGAAGGCGACTTCCTGCAGTGCTCGTTCTCCATCCTGGAGGAGCAGCCCATGGACATGCTTCTAGGACTCGACATGCTCAGGAGACACCAGTGCTCCATCGACCTGAAGAAAAACGTGCTGGTGATCGGCACCACGGGCACGCAGACTCACTTCCTCCCCGAGGGGGAGTTACC |
>XM_011227688.3 |
TCGGCAGGCAGGCAGACGGAGTCGCAGGCGGGTGGCGGCGGCGGTGCTTGGTAGTGAGGGCGGGAGGGAGTGAGTCACTGAGCGtgtgtgagggagggaaggagcaagcGGGCGGAGCAGGCAGCCCGCGCCGCCGTTCGCCCGCAGCACCAGCCAggccccgccgccgccgcagcccaGCGCCGAGGCCGGGCCGAGCCGAGCTGGGTCGGGCCCGGGCCATGCTGCTCACCGTGTACTGTGTGCGGAGGGACCTCTCCGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCCCGCAGCCGAGAGCCAGATTGTCTATGCTGAAAGACCTCTCACAGACAACCACAGATCACTGGCTTCCTACGGCTTGAAAGATGGAGACGTTGTGATTTTACGACAGAAGGAGAATGCTGACCCTCGACCTCCAGTGCAGTTCCCAAACTTACCCCGAATAGACTTCCGTAGTATAGCCGTGCCTggcacatcaggctcccggcaGCGCCAGCCACCAGGAGCACAGCAGTCCCACTCATCTCCTGGAGACATAGCTTCATCTCCTCAGGGCTTGGACAATCCAGCCTTGCTCCGAGACATGTTGCTGGCCAACCCCCATGAGCTGTCTTTGCTGAAGGAACGCAATCCGCCCCTGGCAGAtgctctgctcagtggagacctTGAGAAATTTTCTAGGGTCCTGGTGGAGCAGCAGCAGGACCGAGCCcggagagagcaagaaaggatTCGTCTCTTTTCTGCTGACCCTTTTGATCTTGAAGCTCAGGCAAAAATAGAAGAAGATATAAGGCAACAGAACATTGAGGAAAACATGACAATAGCTATGGAAGAAGCTCCTGAAAGTTTTGGCCAAGTAGTGATGCTTTATATTAACTGCAAAGTGAATGGACATCCTGTGAAAGCTTTTGTTGACTCAGgtgCCCAGATGACTATTATGAGCCAAGCTTGTGCAGAAAGGTGTAATATAATGAGGCTGGTGGACCGTCGGTGGGCAGGGATCGCCAAAGGAGTGGGCACCCAGAAGATTATTGGAAGGGTACATCTAGCTCAGGTTCAGATTGAAGGCGATTTCCTGGCGTGTTCCTTCTCCATCCTGGAGGAGCAGCCCATGGACATGCTTCTGGGACTGGACATGCTGAAGCGGCATCAGTGTTCCATTGACCTCAAGAAAAATGTACTCGTGATCGGCACCACAGGCTCTCAGACCACCTTCCTTCCTGAGGGGGAGTTACCAGAGTGTGCCCGATTGGCATATGGGGCGGGGCGAGAGGACGTGCGGCCAGAGGAGATTGCAGACCAAGAATTAGCAGAAGCTCTTCAAAAATCCGTAGAGGATGCAGAGAAAAGCGGTAAAGAAACTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGATTTAACCATCCAGCCCATCCTTCAGGACAGAGTCCTGAGATTGGTAATCCTATGAGtcttgctcactctgtctctgctTCAGTCTGCCCTGTCAAGCCCAGTGACCCCGACAGCATCGAACCTAAAGCTGTGAAGGCTTCAGCTGAATTCCAGATAAcctccagaaagaaagaacatcttCCTTTGCAGGACCTTTCTGATAGTGCTTCTTCAGCAGGCAGTGCTCCAGCAGACCAGAGTCCAGCCATGCCTTTGCAGAATTCCTCCGAAGAAGCCATCGTTGCTGATAACATGGAGAAACCTGCTGAAAGAAGCACCCAGGGCCTCAGATCTCATCTCCACACAAGACAGCAAACCAGTGTATCTGTCACAACTACCAGGGTGCAAGAACCACCGGGGTTTCTGGGTGAAAAGGGGTGGCATCCAGAAAATCAGAATCTGCGTCAGGTGAATGGCCTTCAGCAGCACAAAGAACCAGGGGATGAACAGCACGGGGTTGGACAGCAGAATGCTCTAAATGACCAAGAACATCTCTGTAACACAGAGGACTTGGAACTTCTTGGAGAAAGGCAACAGAATCAACAAAGAAGTGTTGATTTGGAAACAACAGTGAAAGAAGATGGACTACAACAGAATGTGGACCTTCCAGGTACAGAGGAAAATATTCTACCTTCAGGATGCTTTGGCTGCTCAAATTCAGAAACACTTATGGAAGTAGATACAGTCGAAGAGTCCCCAGTTGCTGTGCTTAATTCAGCAGCCAGCCAGCATGCCAGTGTCAAGAACATTAGCGCATCTGCTCGCACCTTAGAGAATCCCTTGATGGAAGTAGAAACATCAAAATGTAACCCTTCGTCTGAAATTTTGAGTAATTCAGTTTGCACTCAGGATTTACAGCTCCCAGACAGTAATGTTGAAATGTCTGGAACAAGTAAAGAAGATGGGGATTGCTCCCCCTCTTTAAATCTTTGTGGCAGTTCTCAGCCCTCCGTGGAGTTCGCAGAGGAATCTGGCTCGTCTCTAACAGCAGCCTTGAAGGAGCTCCATGAACTTCTGGTCAGTAGTAGTAAACCAGCTTCCGAAAATACATCTGGGGAAGTTATCTGTGAGTCCGAAATGGTAACTGAGGGCCAAACAGTTACTAAGGACCTTTCTGAAAGATGGACCCGAAGTGAGCATCTTACAGCTACCCAGAATGAAGAGCGTTCACAAGTCACCTTTCATCAGACCATATCAGTATCGGTGAGGGCAGAGAAGTTAACAGACACTTCAAATGGTGCTGGAGTAGACGCAGTAGAAAATAGTACTGTTAGGGATCCGGGCGATGGCCCAGTAACGGATAAGGAAAGTGTCCCCGAGCCTAGGGAATCCGGAAAGGAGAGCAGCTCTGCCACTCTAGCCTCAGCTAAAACGTCTAACCAGTCACACTGCACCTTAGGTGTAGACATTCCACCCAAACTCTTAGCAGGTAAGGAGGATGCAGTCAGTCACGCTTCTGAGCAGACGAAGTCCTTGTCCAATTTCATACTGGTTCAAGATTTGGGTCAGGGCACACAGAAGCCAGTGCCAGACAGGCCTGAGACCAGAGAAGATGTCTGTCCTGAAGCCGCAGGGCCACCTCTTGAATTTGAACCACCTCCCAGCCAGCCATCATCAAATCCCTCCATTCTTTCACCATTAATTTTTCCCGCTGCAGACATTGACCGCATTCTCCGTGCCGGCTTCACTTTGCAGGAAGCTCTTGGGGCTTTGCATCGAGTTGGTGGAAATGCAGACCTTGCACTTCTTGTTTTGCTAGCAAAGAACATTGTAGTTCCTACATAACCATGGAAAAGGGGGCTAGACCATActccattccttaaaaaaaagctatacacacacacacgcgcgcacgtgcgtgcacgtgcacacacacacacacacacacacactcaccacatATACAGTATATGTAGAAACCTGCAAGCAGAATGTtgagccagatttttttttaaagatttttttcggCCAAAGTAATTTATCTCTTGTCTGatgaatttgtctattctctttgttaaaatttgggcctttttaaatgtattggcAGTATGTGcatacaaaagctttttattatcATTAAGATGATGTATTCTGGAATAAAATCATTGGTTTTCTGTATAGCATACCATTTTAGAATGAGAGTGAATGCTTTAAAAAGCAGAAGCCATGAGAATTCCCCACCACCCATGCAGCTAAAAGCCGATCAGCTTCCCATCTTGGCTGTGTCTGTGCTGTAGGCAAGGTATGGCTTGTTGGCTCAGTTGTCCATTTACAAACTGGATGACATGGTTTGGTGTTTGGAATTACACTTAGTGCTCTGTGTATTGATGATTCGTCAGTTACAACAGgaaattgaagaataattgaatAATATCTCCTAGAGTggtatgtttttatttgtgtggTTAGGATTTGACCTTTTTATGGGATGAGGTGGGAGGGTTTAGAGCTTGGGCTGTTTTGTGCATCATAGGCTGCTGCATGGATTGCCAAGTACTTGGGGTGGGACACTggtggggagggcgggggagTCACCATCAGAGTGAAACATGGTGCTACCcagatagaaaaggaaagagtctgtaattccatttgcaaatgtcttggTGATGTTTCAAGAACTAGGAGTGAAAAATGGCCGAAACACTGGAATTGACTAGAGAGTGGGTTTGCTAGCATCTTATTGATCACACCTCAACCCTTAGTGATTAATGACGAACTTAAAGATCTGCTAATGGGTCGATCGCCAgcagtttatttccttttgaagCTCATCTGCTAGGAACTTCTTCTAAAGCTCAGGTTGAGCTGGGATCTGAGTGAAATATTGTGAAGTGGGATAACCTTGTCACTGGTTCATCTTGGTGCTTGGAATGGTCAGTCTCTTTTTGGCACCGGAAATAGTAACTGCAGTGTCTGACTCAAGTGGCCTTGGTAGAGAtttccatccctttctttcctcaggagtttcttttttaaagcaagatgCATCATAGTTGTGTTTACCATGTCACGGTAGAGTGGGGCGTAGTATATAGATGTATTTATTGTGGCCTTTTTTTATATGAGGACTAGCCCTTGGAAACCATTGTCCTATGGGCCCCACTGTGCAATAATCCTACTGGATAGATTTTAGGTAgtttttcctggaaaataaaaactCTCTTACGTACCTAGCAGGAATCCGAAATCTTGGttttattgaaaagaattttgagaGTGACTCCCGATTCCAAGTTCTGGTTCGCAGTGTATTTGAAACAGATGTTTTGAAAGGGTGATTCGTGAACTTAGTGTTAAATGATTTTGTCTGAAGTTTTACTCTCTTTGGAAGCTTATTCTTTCCATCAAAATTCGAGTCATTGAGCACAATCAAAATGGAGGCTCATATCTCAggagtttttgaaattttaatttgggggcACTTAGAGATGTTTCTCTTCTACCCTGttccatcttcttttccttttgctgtgaTGTTTGTATGTGTGTTAGGAGACTTTAGTGATGTGATGGAAAGTCACATAGATTCATCATGATCTCTGAAGTTAAGAGATGGTTGATGGAAGGAGTTGTGGTTTACTGTTTTCAAGAGGGCGCTCGGAACAGCGGGTCAGCCAGGTTGTCTTTAAGATGTTCTTTTAGACAGTCACATGTTGCAGATCCTTTTGCCTGCCCCACACCAAAGATGTAAGATGCACTAGAAAATTGCATATAGGATTTCTGTCAACCGACTCTTAGAGCTGTGATTGTAATTAAGTAGTTGGTGCTATGATTGAAGCAAAATCTAGTAGCAATGCAATGGCCCCTGTATTTGCTTTATGGGTAGTAATTGGGAATTTATTCTAAGCTTATAAATCTTTAGGGTCACGAAGTGGGGTTGATGTGAGGTGGGGGAAGTGATCAATGACAACAGACTCTTCCAGAAAGGCCTCTGCGTGAAGATGGGCTTCATAGACTTCTGTCTGGGCAGTGGCACACTGCTCAGAGGCTTGGCCGCTCAAATTTCACAGTGCAGAGATTTGGGAATCAATCCCAGGTGGAATATAGAATATCAGGCCGGAAAAGCTTTTATTATAATAgctttttacatatgtatatttatttttaggagaaaatcGAATAGGCCTATAGTTGTACATGTATTCTTGTTAGGAGTGCTTTGAATGAATGAGCTGAACCCACTTGCCAAATATCCTTGGcctttttcatcatttatttttcagtgtataattgctttcagtttttaaaaccttatttCCCGTTCCATCATTTGTATGAAAGTGAAGTTGTTGACATTGTTAGgattttgaatcatttttaaattttgcagtTCTTAAAACACAAAGGGAATTAAGGAACATGACATCAGTGAACTTTCATTGTCAGTTTTATTGAAAGTGCAGAAATTCGGGGTGCCTGGCTTCCTCAGTCGGAAGAATATgcgactcgatctcagggttgtgagttcgagcctcacattgggtgtagagattacttaaaaaaaaaaagttaaacctttttttaaaaagtgaagaaattcaAGATAATTTCTCTTAAGATAAAATTATTGTGAACTCCTCCAGTTGCCAACAAAACTGATACTGGTCAGCCATAAACGATAATGGGCCACTTTACTGGACAGCTTCTTTGCCACAACCAGTAATGGACGGTTCTGTGGTCAGCGCTCACCTCCAAGGGTGGTCTCTGTTTATTCACCAGAGAGGAGAAGATTATCCTGTATGACTTCTGCAGTTTTTACCCTAAGTCGATTCACATGTGTAGCAATGTGCTTGGTGACCAGGCAGCTATGCCTAGGCTATAGATTTTGCCCATCGGAGCTGATAAGAATGATTTCCACCTGTACCTGTTTAGGCCTCCAGACATCAGCCAGTAGCCTTCATCCCACAGTTTGGACCTTAGCCATTAACATATAAAGATAACCAGTTTCTTGGCAAAGAGAATGGGGTAGATGGTGGGTGGGTGTTAAAACTGTTCTGCCTTGGAGCCTATGAAACCTCCCAGAGCTCCTTGTCTCCATATGTACTAAAGGAAGACACAACCCATGTGTTTCTTCCCAAAGCATTTCTCCAGCAAGAGAGGGTTGCATAAAAACGGAAAGATGTATGAGACTCTGTGTCACCAATTTTATGATAACTAGTTAAAATGGAATCTTATTCTTCCCTTAGCACAGCTTTCTATCTCTAGTAAAAGCCATAAAAACTTAGTTGGTTTAACCATCAGTTCATGTGTATATAGACATGTGTGGTTGACAAATATCCTAGTTAATTTTACATAGACTGAAAAGCAAACAATTTTTGTATCTACAGATATATTCTTCACTTACAGTGGCTTTTATCCCACCATGTGTATAAAAACAGCCTTGCAAATAACTGGCCAGGAAAGTTACAGTACATTCTGACTTCCTTTTCCTACCTGTTTGCCACCTGTAATGAGAGCAAACAGGATCGTTGAACTGCAATGGATTTCAAACTTGTCATCACTGGTAACATATCCTAAGAGAAGCTAATTAGATCATGCCTTCCTCCATTCTCTAGCACAAATACCAAAAAGccaaatttctcctttgaatttGGTGACTTAGTATAGTCTGTGGCtgaactagaaagaaagaagttattaGGAGTTTCCCTTCCCAGAAGATGGAATGTTAACTTTTGTGTTACGagttccataaaataaaaatagctttttttctgaaagagtaAAAACTCCAGTTCCTCTTAACAACAAAGTAAATTTGAAGTGTTTCCTTGAGAACTAGAAATGTAAAATCATGGCTTAAGTTCTATACCTTAGAGGCCTCTCAGTGTTTGTGAGGTGTTCCGAGGAgttcattgaataaataatttaggGGTAAACCTTTGATGtacttgatttttctcttgtgcCTTAGTTTCTCCAAATAGCAGAAGCATCACATTTTGGTGGGAAATAAAAGTGGAAGTATCGGGCAAGTTTGAAAATGGCCTTCCTAGAGATAGAGGCCATGGATGGAGCAGTCCTGAGACTCACCCTTGTTGTTATTTCAGAATTATCCTGCACCAAATCTCTAGACTTCCCTAGATAGAAGAATTACAATAGGGCTTTTTGCATTGGGAGTACCAAAAAATGGTTTCTAGATGTTTATTATGTTCTTTGTTGCACTATCTGTATTGTGGTGGTTAAGACAGAGTTCGAGAAAATGTATGTGGTACTGTTGAAGGCTGTACAGTGTGAGTCTTTGAATAAGATTTCATtgattcatggggcgcctggctggctcagtcgttagaacatgcaactcttgatctcgggattgtgagttggAACCCCatattgggggtagagtttactttaaaaaaaaagtgtattgaTTTTTTCATCAAACATTAAGTGCCTGTGTGCCCAGTACTGGGGAGCACTGGGGATACAGGGGTGACTAAATCAGATTGGAAGCCTGCCCTCGTGAAGTTCTGTCTACTAAGGAgacatgaaataaattttagcttTAAGAGCAAGATCTGTTTTTGCCTGTGAgcatggttttattttcaaagtcatATTGGAGTGATTTGGTTCAAATTCAGAGGAGACTGGGAAAATCAGGCTCAAAGTGGAATTAGATGCTGTGAGCctcaaactgctctaaaaagtttgtattattttttaatagagtcAGAAGCCAACAAAAACTATTCTCGCATTTGATAGAAGTACTTGAAGAGATCAGCATAAATGCTCCCGGGGGACAGGGGGAAATGGGCAGGATAGAAGCGCAAGTAATTACGGGAGACGACCCCAAAGACGCACCAGTGACAGTCAGCTCTTCTCCCAGCAGGACACCCTTCCAACAGGGTAGAGATGTGGAGTGTGCTATGGCATCCTCCCCGCTGCCCGTTTGAGCACGGCTGCTCCGGAATACTGACCATCTGGGCCAACAGGACGGAGCAGACGATCTGCAGGAGTTGCTGTTTTAAAGCAGCTAAGTGCAAGACGTGGAAATGGGAATCTAGAGCAGAAAGTGCAGCAAGTGATGGGGCCGGATGGTGGGCAGGATGACTTACAAGAGGATACAAGCTCTACCAAATCTTTGACAGGATAGCTCCGTCAAAAGGACGTTCTTCGacccattatttaaaatgtcatcatgTATGTTGTAATCCTGAGGCATACAGGTAGAATCTGGACCTGAGTACTAGTGACTTCGAGGCTTACGGTTAGAAAACTCAGAAGTTGTATATTGGTGACTGGTAATCTAGACCCTCTGGGGGCTATAAAAGGTGAGAGGGATATAGCTGGTAAGTTTCAGGGCACACTCTTAAGGAGTGAAATCTAAGAGAAAATGGTTCAAGGGTGTAGGAGTTAGAGAATGTTTCTTTTACCTAAAAAAGTTAGGCAGATGACAGaagacctggggtgggggcgtagaacacaaaattagaatttttacaGAACTGTATTTCTTTAAACACGTACCCTAAGAGGGTTCTCATTTAGCCGACGTCGGGAAGGGGCATGCTGGCTATTTTTCCCTGGGAGAATCCATGTCTGATGGGAAACAATTTTGTTTACCAGGAGCTTGCTTTACACAcagtgttgaatgaatgcatcTGTGGCTTAAAGGAAGGAGACCTCTCTCCATCTCCTACCAGAGGCAGTCAGATCAGCCAGTTGGTTTCCAGATTCCTTCAACCTGAGATTACCTGACGCTGACcagacttctctttctttccctgaagGCCCCACAGCTTTCTGAGTTTAAGCCTCCTGTCTGAGACCTTTCTCTCTGAATGATTATATTCCATTCTCTATTCTCTCGATCATCCTTTTGAAATAGTGATGCACTCAGAGCAGTTCAACATActgattttattgctttcttcaCTGTGCACCAACAATGAAAATtgatttgcttgtttttattcaAAATCTCGTCTTCATGGCAAGTTGGGCTAATGGCCTTCGCTCTTATGTAAGGTTTGTTCAGTTTTGCAGCCATTTTGGCAAATCTTAGCAAATAGAaacccttcttttcccttttgttcttgcAATTGCTCATGTATtgcttttctgacttttctttaaGCTTTGAGACTACTGCATCTTTAAAAACTAGGCGGATTGGCAAAATAGGCTTGCCAAAAGCTTAGTCACTCCCATAGTGCTTTGGTTTTGAGAGTTGGGAAAACTCTGAGAACTTAAGAGAACCAAACTCAGGAATCCCACAGTTGGCTGCACTGTGCCCTTGTTTAGGGGCTGGACATAGGACCTGTCTGCAGCTGAGTGAACTAGATGCATTTGGATTTGAGTTTTTGTCACATACTGAAATGTTAAGTCAGCCCTAAATAATcgaaacactttatttttctttttttaataggaacTTTCTGAAGAAAAAGTGATGTGTAAAACATTTGATATTTAAGACAATAAAGTTTTTATCATAAGA 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