| Retrocopy Name | RAP2AP1 |
|
| Species | Homo sapiens | |
| Coordinates (hg38) | chr3:153162699-153163124 UCSC | |
| Coordinates (T2T) | chr3:155933268-155933693 UCSC | |
| Coordinates (hg19) | chr3:152880488-152880913 UCSC | |
| Strand | + | |
| Parental Sequence | NM_021033.7 | |
| Parental seq. overlap | 383 bp | |
| Parental seq. overlap (%) | 6.9% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | RAP2AP1, located on chr3:153162699-153163124, is a retrocopy of the parental gene RAP2A. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | RAP2A |
| Full Name | RAP2A, member of RAS oncogene family |
| Also known as | K-REV|KREV|RAP2|RbBP-30 |
| Coordinate | chr13:97434169-97469128 |
| Strand | + |
| Gene summary | Enables GTPase activity; guanyl ribonucleotide binding activity; and magnesium ion binding activity. Involved in several processes, including actin cytoskeleton reorganization; microvillus assembly; and positive regulation of protein autophosphorylation. Acts upstream of or within establishment of protein localization. Located in plasma membrane and recycling endosome membrane. [provided by Alliance of Genome Resources, Apr 2022] |
| Species | Scientific Name | Retrocopy | |
 |
Chimpanzee | Pan troglodytes | RAP2AP1 |
 |
Bonobo | Pan paniscus | RAP2AP1 |
 |
Gorilla | Gorilla gorilla | RAP2AP1 |
 |
Orangutan | Pongo abelii | RAP2AP1 |
 |
Gibbon | Nomascus leucogenys | RAP2AP1 |
 |
Green monkey | Chlorocebus sabaeus | RAP2AP1 |
 |
Crab-eating macaque | Macaca fascicularis | RAP2AP1 |
 |
Rhesus | Macaca mulatta | RAP2AP1 |
 |
Baboon | Papio anubis | RAP2AP1 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | RAP2AP1 |
 |
Marmoset | Callithrix jacchus | RAP2AP4 |
 |
Pig | Sus scrofa | RAP2AP1 |
 |
Sheep | Ovis aries | RAP2AP1 |
 |
Horse | Equus caballus | RAP2AP1 |
 |
Dog | Canis familiaris | RAP2AP1 |
 |
Panda | Ailuropoda melanoleuca | RAP2AP1 |
 |
Cat | Felis catus | RAP2AP1 |
 |
Pale spear-nosed bat | Phyllostomus discolor | RAP2CP1 |
 |
Velvety free-tailed bat | Molossus molossus | RAP2AP2 |
 |
Greater mouse-eared bat | Myotis myotis | RAP2AP1 |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | RAP2AP1 |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | RAP2AP1 |
 |
Egyptian rousette | Rousettus aegyptiacus | RAP2AP1 |
 |
Mouse lemur | Microcebus murinus | Without Homology |
 |
Mouse | Mus musculus | Without Homology |
 |
Rat | Rattus norvegicus | Without Homology |
 |
Chinese hamster | Cricetulus griseus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Cow | Bos taurus | Without Homology |
 |
Dolphin | Tursiops truncatus | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >RAP2AP1 |
| AGAGTACAAAGTGGTGGTGCTGGGCTCGGGCGGCGTGGGCAAGTCCGCGCTCACCGTGCAGTTCGTGACGGGCTCCTTCATCGAGAAGTACGACCCGACCATCGAAGACTTTTACCGCAAGGAGATTGAGGTGGACTCGTCGCCGTCGGTGCTGGAGATCCTGGATACGGCGGGCACCGAGCAGTTCGCGTCCATGCGGGACCTGTACATCAAGAACGGCCAGGGCTTCATCCTGGTCTACAGCCTCGTCAACCAGCAGAGCTTCCAGGACATCAAGCCCATGCGGGACCAGATCATCCGCGTGAAGCGGTACGAGCGCGTGCCCATGATCCTGGTGGGCAACAAGGTGGACCTGGAGGGTGAGCGCGAGGTCTCGTACGGGGAGGGCAAGGCCCTGGCTGAGGAGTGGAGCTGCCCCTTCATGGA |
| >NM_021033.7 |
| ACTGCGGGCCCGCGGCTCGGGCGGCACCAGCGGCTCCCGGTCTCTCTCTCTGCTCGCCCTCAGTCCCACCCGGTGCCTACGGGGCCGCATCGCCgcccggctcggcccggcccatgcccagggccgctgctccctcagttgccgccgccgccgccggcgcccagggggccgccgcggctgtgaggtgggggcggcagcgggaggcggcggggcgggccgccggggccggggctgggggcgcagcgcggccggcgtaggtctatgtcgcgggcggcggcggcggcggcggccgcggaggGACGATGCGCGAGTACAAAGTGGTGGTGCTGGGCTCGGGCGGGGTAGGCAAATCCGCCCTGACCGTGCAGTTCGTGACCGGCACCTTCATCGAGAAATACGACCCCACCATCGAGGACTTCTACCGCAAGGAGATCGAGGTGGATTCGTCGCCGTCGGTGCTGGAGATCCTGGACACGGCGGGCACCGAGCAGTTCGCGTCCATGCGGGACCTGTACATCAAGAACGGCCAGGGCTTCATCCTCGTCTACAGCCTCGTCAACCAGCAGAGCTTCCAGGACATCAAGCCCATGCGGGACCAGATCATCCGCGTGAAGCGGTATGAGAAAGTGCCAGTCATCTTGGTTGGGAACAAAGTGGACCTGGAAAGTGAGAGAGAAGTATCGTCCAGCGAAGGCAGAGCCCTTGCTGAAGAGTGGGGCTGCCCCTTTATGGAAACTTCCGCTAAGAGTAAAACAATGGTGGACGAACTCTTTGCAGAAATTGTGAGGCAGATGAACTATGCTGCTCAGCCTGACAAAGATGACCCATGCTGTTCTGCATGTAACATACAATAGCATCCAAATATGGCTGTCCTGGATGGGATTTGCCCAATGTCGTAGGTGATAGAAAACTCGCCTACTCCACTGCAGAACTTGCAGAATGCGTGGTGTTAATCTACAGAGAACTGCAGCCCTTATTCAGAATTGAGCAGTGATTGTCAGTTGATATCTCTGAGTAACATTTGGGTTCAGTAACTACAGTTTTCACCATTTGTCCTCAGTCTCCTTTATGCATCTGCAACTTTAAGGCATAGTCCATCGATCTACAGGGTGATCTCATTTGAAAGCTATGATGGCATTGTCGCTGAGTTGACAGAAGCAACTATTGTACAAATTAAAAATAACCATAAGGGAGAAACCAGAAGAATTCCTCTGACCACTTACAATTAAAATATTTTGTCTTCTTTAAAAAAATAAGTAAAGGAGAAATATTTTCCTACAAGAGTACTGAATTTCAGGAAATGGGATAGAGCTTCTAACCAATGTATTCCGTCAAGTAAGATAATAACAGCTGACCTGCCAACAGCATTACAGGGAGATTCTTTGCTCAGCTAACACATTTCTGTTTTTCAAAATTGATGCTTAATTGTAGCTGTTATTCTAATTTGTGACATGGAACTAACTCATGCTTCAATCCTTGATAGAGCAAAACTCAGAACAGGTTATGTAAAAATATAGTCTGGCTTTAGAATTTGTTAATTCACCTGCTTTGCCACAGAAAATGGAGGCTTTCACAAGGGTTTGATCAGAATTAAAACCCCAAACCCGCCCTCTGTTAGGGGTGGTCTTTATAACTTTACTGAACAAGAGGGAAGCAACTGTGATGGGAAGAGATTACCTAGCCTTACTAACAAGAAGCATTCTAATAGATAAACTAGTACCATCATGTAAGGAAGATGAAGCCATGTTGCATCCACATGTTCCCGTTTGCAGAAACCTCACAGGACAGTACGAATATCTGGCATTTTTAAGTTCATTAAAGCAGCAAATTCCTTCTCGCCTTTAAGGGCTATGGTTGTAGTGTGACCCGTGGCTAACCTGCTTTCAAAATCAAGTATTTGCTGTAGCAGAGCTTTATTGCAGGCATTTTAAAAATTGAATAACCATGTGAAATAATTTGGGCTTAAAAGTGAACATAAATTATAGAGTGGAAGGTAAGGGACAAAAGCCTTTTACCTTTAATTTTCCTGGAGAATTATATAAAGGTTTTCTTAGAACAATTTTGCCCTGATTACTGAAGCGTCAAATAAAGCTGGAGTGAAAATTTTGTTTTGAAAAGGTGCTCAAGCTCTGACATTTTTGGTTTTCATAGTCGTGAAGTATTTATCATTTGCATGACTAATGGCACAGGAAAAACCTATTCATAAGTTTTACAATCAAGTATAGAGGGGTCTTCAGCTAACTTAGTTATACATAAATGCTGAAAAGATTATCTTGAGCTGGGCCTTGGGAGAAGAATTTGGCCTTCAGAACTGCAATATCACTGAGCCTGCGATCTATACACCACCCCACATTTTGTTGGTTTCACAGTCTTGTGCAAGTAACCTCTGGTCTTACGTGTGTAACTGAGAGAAGAgtgtgtgtttgtgtgtgcatgtgtgtTTATTGTTCCTAAGAATTTGGCACAAGTCAGAGATAATTGCCTATACTAAGAATCTATACTGCAGAATATAGTGTATCAAAAACTTTTTTCTTTTAAATTATTAAAGTGTCTTTTATACTTTTATGAAATCATTGGTAGCCCCCCAAGTGTTTAATAACTGGCATTAAGCTTAGAGGGTGAAAAAAAAAAAAAAGATTGATAGTATTTTTCATAATGAAAAAACTGAAGAGATACGTGAATGAAACCAGGCCATAGCTGTCATAAATCTTTGACTTTTGAATATTTACATTCTTCAGTATAATTTTTTATAATCCTCAATTATGAACCACCTTGTTTATAGGACAAAAAAATTTAACCAATTTTATTGAAACGAATTTCACTGTGTAAAAGTTGGTTTGATTCAAACATGTAGAGAAGTTGTAGATTCAAGATATATGATTTCTCTATGGAAATAAAAATATTTGTTAGTGAATTGGTTGAGTTTTGATTCCTCTAACTTCTCAGAATGATTCTTTAGAATTCTATAATTCATAGCAATTTTTGACAAGTAAGATTGCAAAATAGAAATATCTATAAAGATTCCACAGTTTGACATTATGGCTTGCTATGCAGATGTGAAAATAGGTTAAATAATATGAAAGATATGGCAGAATGTAAAGTGGAAAAGATGACCTAAAATTTTGAGTTGTATTAATAGTTAAAAACATTTGTGTCAGATGACAGGGTGGGCTTTTACTGTCAAGACATGAATAAGAACTGATCTGGCTGCCTGATGAGTGTTTCCACGCAGCCCTGCATATTTAGTGACCAAGGCATCAAGGACATCCCGAAACTGGAAATTCATATCCATCTGGTATGAATATATAACTCAGCTGGCAAATGAATGTGTTTGTTGAGATATTACAGTAATAAAACACTTAAGAACAGGAAGATTACATTTGTTGGCATACGAAACCTTAGTGGCTACAGAAGAAAGTTGACCTTGTGTCACTATTTATTTTATGCCCTGATCAGACTAGCAACTTAGATAAGTGAAAGTTTTTCTAACATGCCTTAAAAATATTATGGTTTGATCCAAAGACCCACTTTTTCTTTAGCTCTTGTGATAAGATTTTCTTTTTTTTACTTTTATACAAAGGCAGCATCTTTGAATTTTTTTTTCTTTTGATGTTGCAACTTTTGGGTTCTTTTAAACTGTGATAGTGATGGTAACTGATGCCTTTCATTTTGTTCAACTTATACAAAACAAGCCAGCATCTGATCAAAAGTATTACATAAAATATTTTCTTAAACTATTGAAAGGTGCTTTGATGATTTTCTCCTTTGGTTTGTAGAATTAGGACTGAACTTTTGACTCAAATTGCTACAGTTGCCATCACCTTTCTGTGGTAATACTACTGATATTTGCTTTTCTATATAAAGAAATGTTGCCTAAGGCTGTCTGGTATTTCTTTTCAAGGGTTTTCCAGTATGAATGTTAATGTTGTCAGTGTATGTATGAATATGAAAGTGCtttgttttgtttgttgctgttttttgtttatgtgtgtgtttttaatttttttgttCTTATCAGCAGTCTTGTGTTAGCACTGGGTAAGCTTTAATTGTCCCTTAGCCAATCAAACATTAAGGACTATGGAGGTCTTTTTTTTTTTATTTAACATGTCATTGTTCATCTATTAAATCTTGATCAGGGTTTCAAGAATGACTGCAGTGGGTTTTGGAAACAGACTTATCATTATTGATTTGAGGTTTCCCAGAGATATAGTTCACAGTTAATTGTTGCGCTCTAATACAACTGACCATTTAAAATTGAACAAGTTTATTGTTTTGTAACAATGTCAGTTGTTAAACCTTGACATTTCAATTAAAACATGAATTGTAGTTATAACTCAATGCAAATTCAACAGTTGTATTTGGAGTTAAATTATTTTAACAAATAAATTTATTTAATGAAACTCTGGATTTGCTTTGTTTTGTACATGCTCATGAGAGAAATGTATTATATACAAAAACAATTAAAAATTGCCATATAATGAATTTAGTACTCTTCATACAAAAATATTTTAGCTGATTTGAGAGTTCATCATATAAAAAGGCAGGTAGGTAGATAATTTTCATAGTCTTTAAAAATAAAAATAACATGTAAGAGACTGTAAAATCAGTTATTATAAATATAAACTTATCTCTACAAATGATTTTATATTTTGAATGGTAGCTGGTTAATTTAAAGCCTGATGCTAAGGTTAACAGAATTGTTCAAATAATTAACATTAATTAGCAATATCACTAAAATGATTCAGAGGCCTTCTAGTGATGGCTTGAAGCCGTCTTTCTGTTTTCAGGTCATGTGGATCCGAAGGTGCCAGAAGCTGAAGGTTGCCGCCAGGCTGTAGGGCCTGCTTGTTCTATATGGGGCCCTATGAAAGTTGACAGATGCTGTTAATTGTATACAGCCTTCAGCTGCTCTGATAAGGAGCCCATTCATTTCCTAAGCCAATTTAAACTATGCCTTTTGGTTATGTTGCCTTCAAACTCTGTTGAAATCCTCTGGCAGCATTCCACCAGTTGAGAAGCTTCATTGTTTTAGATTATAAGAATAATTTGAATGAATATAACAGAGGCACTGTAGATAGAATCCCAGATATTTAAAGGAAAACATGCCTATATTTTAGGAATATCTTCTGAAGAACTTCATAATTTTATTTGAAGTGTTTGTAAATTTTTTAATAAATTATTTAAATGTATCAATAGTGGATAGTTGGAAGAACGTCTTTGAGGCTAAAAAGTAGTACTCTGAAATTCTCTCAAGTTATATTATTTGTCTGTTAGAGGTCCACGAATGAAAATATATGTAGCTAAAGGAGTAAGGTGCTGCCCAATTTGGAACCCAACTGACCTCTAGGATCTATGAAGCAGAGAATATTACCACAAACTTCTGAAAGAAGCTGTTGACCTCGTTTCTTAATTTAAAATATGTTGCCACATAAATACTAATAAAACATAGTTGCTCTTCATCTCTTAAATGGATCATTCCAACTGGTTTTACATCGTTGAATATTATCTAGTATTTTTAATAAATATTTTCATAAATA 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