| Retrocopy Name | FTMT |
|
| Species | Homo sapiens | |
| Coordinates (hg38) | chr5:121852163-121852599 UCSC | |
| Coordinates (T2T) | chr5:122369030-122369466 UCSC | |
| Coordinates (hg19) | chr5:121187858-121188294 UCSC | |
| Strand | + | |
| Parental Sequence | NM_002032.3 | |
| Parental seq. overlap | 351 bp | |
| Parental seq. overlap (%) | 29.2% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | FTMT, located on chr5:121852163-121852599, is a retrocopy of the parental gene FTH1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | FTH1 |
| Full Name | ferritin heavy chain 1 |
| Also known as | FHC|FTH|FTHL6|HFE5|PIG15|PLIF |
| Coordinate | chr11:61964285-61967634 |
| Strand | - |
| Gene summary | This gene encodes the heavy subunit of ferritin, the major intracellular iron storage protein in prokaryotes and eukaryotes. It is composed of 24 subunits of the heavy and light ferritin chains. Variation in ferritin subunit composition may affect the rates of iron uptake and release in different tissues. A major function of ferritin is the storage of iron in a soluble and nontoxic state. Defects in ferritin proteins are associated with several neurodegenerative diseases. This gene has multiple pseudogenes. Several alternatively spliced transcript variants have been observed, but their biological validity has not been determined. [provided by RefSeq, Jul 2008] |
| Species | Scientific Name | Retrocopy | |
 |
Chimpanzee | Pan troglodytes | FTH1P11 |
 |
Bonobo | Pan paniscus | FTH1P11 |
 |
Gorilla | Gorilla gorilla | FTH1P11 |
 |
Orangutan | Pongo abelii | FTH1P10 |
 |
Gibbon | Nomascus leucogenys | FTH1P3 |
 |
Green monkey | Chlorocebus sabaeus | FTH1P13 |
 |
Crab-eating macaque | Macaca fascicularis | FTH1P7 |
 |
Rhesus | Macaca mulatta | FTH1P7 |
 |
Baboon | Papio anubis | FTH1P4 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | FTH1P6 |
 |
Marmoset | Callithrix jacchus | FTH1P6 |
 |
Mouse lemur | Microcebus murinus | FTH1P5 |
 |
Rat | Rattus norvegicus | Fth1P6 |
 |
Chinese hamster | Cricetulus griseus | Fth1_1P1 |
 |
Cow | Bos taurus | FTH1P4 |
 |
Dolphin | Tursiops truncatus | FTH1P6 |
 |
Dog | Canis familiaris | LOC102152958P1 |
 |
Panda | Ailuropoda melanoleuca | FTH1P2 |
 |
Cat | Felis catus | FTH1P1 |
 |
Sloth | Choloepus didactylus | FTH1P75 |
 |
Mouse | Mus musculus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Pig | Sus scrofa | Without Homology |
 |
Sheep | Ovis aries | Without Homology |
 |
Horse | Equus caballus | Without Homology |
 |
Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
 |
Velvety free-tailed bat | Molossus molossus | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
 |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >FTMT |
| GGGTGCGCCAGAACTTCCACCCCGACTCCGAGGCTGCCATCAACCGCCAGATCAACCTCGAGCTCTATGCGTCCTACGTGTACTTGTCCATGGCCTATTACTTCTCCCGGGATGACGTGGCCTTGAACAACTTCTCCAGGTATTTCCTTCACCAGTCCCGGGAGGAGACCGAGCACGCGGAGAAGCTGATGAGGCTGCAGAACCAGCGAGGAGGCCGGATCCGCCTGCAGGACATCAAGAAGCCGGAACAGGACGACTGGGAAAGCGGGCTGCATGCCATGGAGTGTGCTCTACTCTTGGAAAAGAACGTGAACCAGTCGTTGCTGGAATTGCACGCTCTAGCCTCAGATAAAGGTGACCCCCATTTGTGCGATTTCCTGGAAACCTACTACCTGAATGAGCAGGTGAAGTCTATCAAAGAACTAGGTGACCACGTG |
| >NM_002032.3 |
| GCCAGACGTTCTTCGCCGAGAGTCGTCGGGGTTTCCTGCTTCAACAGTGCTTGGACGGAACCCGGCGCTCGTTCCCCACCCCGGCCGGCCGCCCATAGCCAGCCCTCCGTCACCTCTTCACCGCACCCTCGGACTGCCCCAAGgcccccgccgccgctccagcgccgcgcagccaccgccgccgccgccgccTCTCCTTAGTCGCCGCCATGACGACCGCGTCCACCTCGCAGGTGCGCCAGAACTACCACCAGGACTCAGAGGCCGCCATCAACCGCCAGATCAACCTGGAGCTCTACGCCTCCTACGTTTACCTGTCCATGTCTTACTACTTTGACCGCGATGATGTGGCTTTGAAGAACTTTGCCAAATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTGAGAAACTGATGAAGCTGCAGAACCAACGAGGTGGCCGAATCTTCCTTCAGGATATCAAGAAACCAGACTGTGATGACTGGGAGAGCGGGCTGAATGCAATGGAGTGTGCATTACATTTGGAAAAAAATGTGAATCAGTCACTACTGGAACTGCACAAACTGGCCACTGACAAAAATGACCCCCATTTGTGTGACTTCATTGAGACACATTACCTGAATGAGCAGGTGAAAGCCATCAAAGAATTGGGTGACCACGTGACCAACTTGCGCAAGATGGGAGCGCCCGAATCTGGCTTGGCGGAATATCTCTTTGACAAGCACACCCTGGGAGACAGTGATAATGAAAGCTAAGCCTCGGGCTAATTTCCCCATAGCCGTGGGGTGACTTCCCTGGTCACCAAGGCAGTGCATGCATGTTGGGGTTTCCTTTACCTTTTCTATAAGTTGTACCAAAACATCCACTTAAGTTCTTTGATTTGTACCATTCCTTCAAATAAAGAAATTTGGTACCCAGGTGTTGTCTTTGAGGTCTTGGGATGAATCAGAAATCTATCCAGGCTATCTTCCAGATTCCTTAAGTGCCGTTGTTCAGTTCTAATCACACTAATCAAAAAGAAACGAGTATTTGTATTTATTAAACTCATTAGTTTGGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCTAGCTTTCACAGTTTTTATGAATAAAAGGCATTAAAGGCTGAA |
| PMID - Link | Title |
|---|