Retrocopy Name | MDM4P1 |
|
Species | Homo sapiens | |
Coordinates (hg38) | chrX:17934051-17934351 UCSC | |
Coordinates (T2T) | chrX:17516659-17516959 UCSC | |
Coordinates (hg19) | chrX:17952171-17952471 UCSC | |
Strand | + | |
Parental Sequence | NM_001278516.2 | |
Parental seq. overlap | 248 bp | |
Parental seq. overlap (%) | 2.5% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | MDM4P1, located on chrX:17934051-17934351, is a retrocopy of the parental gene MDM4. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | MDM4 |
Full Name | MDM4 regulator of p53 |
Also known as | BMFS6|HDMX|MDMX|MRP1 |
Coordinate | chr1:204516377-204558120 |
Strand | + |
Gene summary | This gene encodes a nuclear protein that contains a p53 binding domain at the N-terminus and a RING finger domain at the C-terminus, and shows structural similarity to p53-binding protein MDM2. Both proteins bind the p53 tumor suppressor protein and inhibit its activity, and have been shown to be overexpressed in a variety of human cancers. However, unlike MDM2 which degrades p53, this protein inhibits p53 by binding its transcriptional activation domain. This protein also interacts with MDM2 protein via the RING finger domain, and inhibits the latter's degradation. So this protein can reverse MDM2-targeted degradation of p53, while maintaining suppression of p53 transactivation and apoptotic functions. Alternatively spliced transcript variants encoding different isoforms have been noted for this gene. [provided by RefSeq, Feb 2011] |
Species | Scientific Name | Retrocopy | |
![]() |
Chimpanzee | Pan troglodytes | MDM4P1 |
![]() |
Bonobo | Pan paniscus | MDM4P1 |
![]() |
Gorilla | Gorilla gorilla | MDM4P1 |
![]() |
Gibbon | Nomascus leucogenys | MDM4P1 |
![]() |
Crab-eating macaque | Macaca fascicularis | MDM4P1 |
![]() |
Rhesus | Macaca mulatta | MDM4P1 |
![]() |
Baboon | Papio anubis | MDM4P1 |
![]() |
Golden snub-nosed monkey | Rhinopithecus roxellana | MDM4P1 |
![]() |
Marmoset | Callithrix jacchus | MDM4P2 |
![]() |
Horse | Equus caballus | MDM4P1 |
![]() |
Velvety free-tailed bat | Molossus molossus | MDM4P1 |
![]() |
Orangutan | Pongo abelii | Without Homology |
![]() |
Green monkey | Chlorocebus sabaeus | Without Homology |
![]() |
Mouse lemur | Microcebus murinus | Without Homology |
![]() |
Mouse | Mus musculus | Without Homology |
![]() |
Rat | Rattus norvegicus | Without Homology |
![]() |
Chinese hamster | Cricetulus griseus | Without Homology |
![]() |
Rabbit | Oryctolagus cuniculus | Without Homology |
![]() |
Pig | Sus scrofa | Without Homology |
![]() |
Cow | Bos taurus | Without Homology |
![]() |
Sheep | Ovis aries | Without Homology |
![]() |
Dolphin | Tursiops truncatus | Without Homology |
![]() |
Dog | Canis familiaris | Without Homology |
![]() |
Panda | Ailuropoda melanoleuca | Without Homology |
![]() |
Cat | Felis catus | Without Homology |
![]() |
Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
![]() |
Greater mouse-eared bat | Myotis myotis | Without Homology |
![]() |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
![]() |
Greater horseshoe bat | Rhinolophus ferrumequinum | Without Homology |
![]() |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
![]() |
Sloth | Choloepus didactylus | Without Homology |
![]() |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
![]() |
Opossum | Monodelphis domestica | Without Homology |
![]() |
Platypus | Ornithorhynchus anatinus | Without Homology |
![]() |
Chicken | Gallus gallus | Without Homology |
![]() |
Turkey | Meleagris gallopavo | Without Homology |
![]() |
Zebra Finch | Taeniopygia guttata | Without Homology |
![]() |
Budgerigar | Melopsittacus undulatus | Without Homology |
![]() |
Painted Turtle | Chrysemys picta | Without Homology |
![]() |
Lizard | Anolis Carolinensis | Without Homology |
![]() |
Frog | Xenopus tropicalis | Without Homology |
![]() |
Zebrafish | Danio rerio | Without Homology |
![]() |
Drosophila | Drosophila melanogaster | Without Homology |
>MDM4P1 |
GTGACTTGTGGGTTTGGAATGAGTCAATACTGGAGCAGATAGGTGTTGGAATAAAAGTAGGAGCTACTGCTACTGATAAAACCAGCAAAAAAGTAGGGAATGTGAGGTGATTGATGTGGGAAAAAATGACCTTGAGGACTCTCCACCCTTAAAAGATTACACAGATATTGAAGTTACTTCTGAGGATGTGTGGTAGTGTTACTGAGTATAAGAAATTTAACCTTCCAAACAGGAGGTGTTTCTGTTGCAGGGCCTTGAGGAAAGATTGGTATTCAGACTCTTCTAAGTTAACCCATTCTCT |
>NM_001278516.2 |
ATTACTCGCCATTTCAAAATGCTGCCGAGGCCCTAGGATCTGTGACTGCCACCCCTCCCCCCACCCGGGCTCGGCGGGGGAGCGACTCATGGAGCTGCCGTAAGTTTTACCAACAGACTGCAGTTTCTTCACTACCAAAATGACATCATTTTCCACCTCTGCTCAGTGTTCAACATCTGACAGTGCTTGCAGGATCTCTCCTGGACAAATCAATCAGGTACGACCAAAACTGCCGCTTTTGAAGATTTTGCATGCAGCAGGTGCGCAAGGTGAAATGTTCACTGTTAAAGAGGTCATGCACTATTTAGGTCAGTACATAATGGTGAAGCAACTTTATGATCAGCAGGAGCAGCATATGGTATATTGTGGTGGAGATCTTTTGGGAGAACTACTGGGACGTCAGAGCTTCTCCGTGAAAGACCCAAGCCCTCTCTATGATATGCTAAGAAAGAATCTTGTCACTTTAGCCACTGCTACTACAGCAAAGTGCAGAGGAAAGTTCCACTTCCAGAAAAAGAACTACAGAAGACGATATCCCCACACTGCCTACCTCAGAGCATAAATGCATACATTCTAGAGAAGATGAAGACTTAATTGAAAATTTAGCCCAAGATGAAACATCTAGGCTGGACCTTGGATTTGAGGAGTGGGATGTAGCTGGCCTGCCTTGGTGGTTTTTAGGAAACTTGAGAAGCAACTATACACCTAGAAGTAATGGCTCAACTGATTTACAGACAAATCAGGATGTGGGTACTGCCATTGTTTCAGATACTACAGATGACTTGTGGTTTTTGAATGAGTCAGTATCAGAGCAGTTAGGTGTTGGAATAAAAGTTGAAGCTGCTGATACTGAACAAACAAGTGAAGAAGTAGGGAAAGTAAGTGACAAAAAGGTGATTGAAGTGGGAAAAAATGATGACCTGGAGGACTCTAAGTCCTTAAGTGATGATACCGATGTAGAGGTTACCTCTGAGGATGAGTGGCAGTGTACTGAATGCAAGAAATTTAACTCTCCAAGCAAGAGGTACTGTTTTCGTTGTTGGGCCTTGAGGAAGGATTGGTATTCAGATTGTTCAAAGTTAACCCATTCTCTCTCCACGTCTGATATCACTGCCATACCTGAAAAGGAAAATGAAGGAAATGATGTCCCTGATTGTCGAAGAACCATTTCGGCTCCTGTCGTTAGACCTAAAGATGCGTATATAAAGAAAGAAAACTCCAAACTTTTTGATCCCTGCAACTCAGTGGAATTCTTGGATTTGGCTCACAGTTCTGAAAGCCAAGAGACCATCTCAAGCATGGGAGAACAGTTAGATAACCTTTCTGAACAGAGAACAGATACAGAAAACATGGAGGATTGCCAGAATCTCTTGAAGCCATGTAGCTTATGTGAGAAAAGACCACGAGACGGGAACATTATTCATGGAAGGACGGGCCATCTTGTCACTTGTTTTCACTGTGCCAGAAGACTAAAGAAGGCTGGGGCTTCATGCCCTATTTGCAAGAAAGAGATTCAGCTGGTTATTAAGGTTTTTATAGCATAATGGTAGTACGAACATAAAAATGCATTTATTCCGTTCACTTACCACATTATTTGAAAATCAATCCTTTATTTAATTTTATTTCCAACCTGTCAGAGAATGTTCTTAGGCATCAAAATCCAAGGTAGCTGTAAGAAAAATACTGGAGCTAACAATGAAGAACAGAAGTAATCTGATTAGTCAAATTATTAAGTGCCATGGATTACTTTATGCAGCAGTCAGGTACATAGTTAGGTGAACCCAAAAGAAAAACTCTTGAAAACAAGAGATTTCTTCCATGCACATTTACAAtattgaggtataattaacatgataaagtgtttccttctaacgagttgtagaaatctgagtaaccacccaaaaaagcaatagaatgtttctgtcaccccaaaacactcccttctgcccctcttcagacagtccttcaGCTATTTCATGGCTCTCACCCTAGttttttttttttttgcacttttttttttCCGGGGGTATAGGGGAGGTGTGGGGCgacagggtctgtcttgttctgtctcccaggctgaagtgcagtgcagtggtatgatcatggctcactgcagccttggtttcctgggcataagtggtcttcccacttcagcctcctgagtagctgagactatagactagcataaccacactggctaattttttgtggagatgaagtctcactatgttgcccaggctggtctcgaactcctgggctcaaacaatcctcccgcctcagccttccaaattgctgggattatagtcatgaggcacctagtctggccCTTTTGCAAGACTTTAATCTGAAATCTAAATTTTTAAAATTTAAGTACTTACAAAGGATATACTATCCAACATATTGCatattatatatgtgctttaaagtttttttttttttttgagagacggtctcactttgtcatccaagctggagtgcagtggtgcaaacacggcccacctcctgggctcaagtgatcctccagcctcagcttccctcacaggcattcactatcactcccagctaattaaaataatttgtagacggtgtctcgttatgttgcccaggctggtctcgaactcctgggtttaagtgattcccccgcctcagcctcccaaagtgttgggcttacagccttgagccactatgcttggctcaaagatatttttatgaaagccctgggactatagatttagctgattaaatttatagaaaaagtcctgtcatataaactggcaaagtctgttcttaatttaattagccaaatcagacttaacttccgtcagaacatgtcttggttttaattcagataaaCACACAAACATACTTCTCTGGCACAGCCTTCAGAAGCATCAGtttttgttttgttttgttttgttttttgagacagggtcttgctctgtcgcccaggctggagtgcactggcacaatcacagttcactgcagcctcgacctcccagatccaagcaatcctcccacctaagcctcccaagtagctgggtctataggcgcgtgccaccaccatgcccagctgaattttgtattttttgtacagacagcattttgccatgttgcccaggctggtcccaaacttctagcctcaagcaaccctcctgcctcagcctctcaaagtgctaggattgcagtcctgagctactgcccccTACCCTCTTTGCGTCTTAGGAGTCATTTAGATTTTTTTTGAtccttttgtttagtgcctctggagctgcttacaccaaggcaatacgccttgatatactggatggttgagaggcagcctctttttttttttttttttttttttttttttggaggatagggagtatggctgttgtgaaaagggaggtaaagagaaatggtagatctgaagaggcctcatcagagcacatattttaggacaacacatatggaaattggacatctttaagttggtttccatagagctatgcatgtatccttacccccatgggaaaatgttggtgtgttctcaagggtatgcatgtgtcattttgaagaccaAGGCCCTAGAATTGTCAAACTTAAGGATCATAAAAATCATGAGGGTTGCTTGTTAAAAATGTCCAAACGTGCAGAGACTGATCTTTGAGATCTGGACCAGGAATTTGCATTTGAACAAGTGTTCCTGGAATCTCTATGCAAGTTTTATACAGAACATACTTTTGGAATCCTTGCCCTAGAcaggggtgtccaatcttttggcttccctggtccacaatggaagaagaattgtcttggaccacacataaaatacactaacactaacaatagctgatgagctaaaaaaaaaaaaaaaaaaaatcgtggaccgggcgtagtggctcacgcctgtaatcccaacactttgggagatcacctaggtcgggagtttgagaccagcctgaccgacatggagaaaccccatttttactaaaaatacaaaaaattagctgggcatggtggtgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgagagggggagattgcggtgagctgagattgcgccattgcaccccagcctgggcaacaatagcgaaactgtctcagaaaaaagaaaaaaaaaatcgcaaaaagaaaaatctcataatgtCGTTGTTGGtttttttttttttttttgagacagtctcactctgttgcccaggctggagtgcaatggcatgatctctgctcaccgcaacctctgcctcccgggttcaggtgattctcctgcctcagcctcccagatagctgggactacaggcacataccaccatgcctggctaatttttgtatttttagtagagatgggggtttcactgtgttggccaggctggtctcgaactcctgacctcatgatccacacacctcggcctcccaaagtcctgcgattacaggcgtgagctaccgcacccagccAAGTTGTAATTTTTAATAAAACTTAAGAAGTAAACATTTTACTTATGTTTATAGGTATTTGATCCTAAATTTGACACATCATTGCCCATGAAAGAATCCTCTTAGGCTGCTCAGCTTCACTCTTCCTGCTTGCCCACCGGGGTTTTTCACTGCTTCTGTTAGCACTAAGTACTTAGACGATCCTAAGATATGTGCTTGAGCCGAATTTCATCTTTACTTGTAGGAAACTTTAAACTATTTCttttcttttcttttttttttttttttacttgagatggagttttgctcttgtcgcccaggctggagtgcagtggagtgatctcggctcactgcaacctctgcctcccgggttcaaatgattctcctgcctcagcctcccaagtagctgggattacaggtgtgcaccaccatgtctggctaattttgtatttttagtagagatggtttcaccatgttggtcaggctggtctcgaactcctgacctcaggtcatccacccacctcagcctcgcaaagtgctgagattacaggcatgagccacagcgcccagcTTAAACTATTTTCTTGGTCTGTTTTTGATTTTCTTTTTTCCTTGCCACTGCGGTACAGATTTTTTTTACTCACTGCCACTAAACTAAAGCAAGGCATAGTTTATATGTGAAGTGTTCAGAGTTTACTGCTATAAGGAAACTTCCAAATACTGACATTTACCTTTTAGCTGTAGTTATTGGGACCATGTGCTCTGGTTTTCTGGAGACTGCCAAATTGCTCCCATTTTTCTGCATCCCACCTGGTTTCTTTCTGCATgtcccctttcactttcaaacctcttcatttggatgttaaattatatggtcaccTAGTTATAGGTAAGCCTTGTTCGAGTTGATATCTTGATTGTGAGGAAGGATCTGTGTCATTGGAGCTTGTTTCTGCTGCAACGTGCTGTAGACTATGAATAATGAAATCACACCACATTACCATCAGATTTCTTGTTTTAGTTGTCAAATTAATATTTATGATTGTTATCTTGGGCGAAAAGTTCAGAGCAGAGATGACAAATCATTAGAACAACGATGAATTTCAGTATTACGGCTAAAAAGTTCTTCTGTCTGAATATTAACTCACTCTCCTTCCAGTGTACTTCACAGTAATTGGTATGCTTTTTTATTTAATGCTTAAATCAAACTTTATAAAAATCTTAGACCAGATCTTTAATATGGTATGCCATTTCCCCAGTCTACCAATGGAATAGTATGGGTTTCTAATCCTAGGCTTGTACAATGGATTGGAGTTGAGCCATGCCAGCCTCCACACTGCCACTAACTTCTGTAATGTAAGATTGAGTCACTGCCAAGCATTTGAAATATGCAGTTGTGTTTTAATTATAATTTATGTATAGTTAGATGTATGTAGTGCATTGTGTGGTATTATTTGGTTTGTAAGAATTTATTTTTAAGGGTCAAGGTCATTTGTAACATTTTGTGTGTGTCAATTCAATGCAATGTTGGCTGCCTTTTGAAGTCTTTGATATATTGGTGAATATTCTTCTGATCTATAATACAAAGCTATGTAATGTTACCTCTTGACTCGCTTTTGAAAGGAAGACAATTGTTAACTAGATATTTGAGTTTTTTCCCCTCAGAATTATGTGAATTTCTGATATATGGCTTTAGATACTGTGAATCTGTTTTCCATTTAGTCAGTTATCTGCTTAAATTGTTCAGAACTATATCCTAACGAGCAATTAGTTCTGATGGTTCTCCCAGTCATGAGTGTGCATGTGTGCAAGCATGTTTTGATCCTGATGCTACCTTTGCTAAAAATGGCCATAGATTAGGAACTAGCTATGTTTTTAGAATCAAAGATGAACCGGTAAGCTGTCTCATGTACCAAACGTGAAATTTACAGTGTTTACAAATGTCTGGAATTTTGCACTGCCATAGGGAATGTTAAGGTTACTTGGCTGGAATTTATCAGACTTGTGAGTAAACAAGTTGAAGTTTAGCAGATGAGGGGGAATATTGAGGCCCCTAAGGCTAAACAAAATAATCAGTATCTGAGATAGTGGCTAATGTGGCTCCCCAGGCCTAATTTGGGAACAGTTTTTCCTGATTGCTTTGAGAAGTACTTTCTTTTGACAGAAATTTTCATTCTGCTTGCCATTGCTATATTCTCCCTTTATAGGAGCCATTGGATTTCTTTCCTTTTGTGGGAAATGTCCCATTAGCATTTTCAGATCTTTTGATGTGCACTAATGCCATTATTGGTAATGCCGTTATTGGTGAATACAGCATAGTTAAATAAACTGTTACAGTAAATCTACACTTGGATTTGCTGCACCTCTACCAATAGCCTTTTGAATGACTGAAAGTGTTAACAGAGAAAGAGGCATGTCTGCAGAAAGAGATAGCTAATATTTTTTGGTACTTTATCTGAAATCCAAGATGCTGCTTCCCCTGCAGGTTGTTTTCCTTCTTACGATCCTCATTGAATCCCCTCTGGGAGCACAGGACAGTTAGTAGAACTCTCCAtttctttttttttttttttagacggagtctctctctgtcgccccggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttcaccccattctcctgcctcagcctccctagtagctgggactataggcgcccgccaccacgcctggctaatttttgtatttttattggagacggggtttcaccgtcttagccaggatggtcttgatctcctgacctcgtgatctgcccacctcagcctcccaaagtactgggattacaggcgtgagccaccgcgcccggccGGAACTCTCCATTTCTTAAGGTAAAGAGGGTCAAGGATACCTAAAAAGGGTCAAATAATGCTAGAAGAGCAATTCCTCTTTCAGAGCAGTTGCTGTAATTTGGCAAATGCTTTATCGAAGATTGATATTAggctaggggcggtggcttacgcctgtaatcccagcactttgggaggccgaggtgggtggattgcctgagctcaggagttcgagaccagtctgaccagtatggtgaaaccctgtctctactaaaaatacaaaaattagccggtcgtggtggcgtgcacctgtagtcccagctacttggcaggttgagacaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagactgcaccactgcgctcccacctgggtgacagagactctgtctcaaaaaaaaGGACATTTATCATTATAACATCTTATTAGAGCCCCTAATTTCTTATCTGAAGGCACTGTTTTTTTTTTTAAACAGTTAAGTACTGATGTCAACAGACAAATATTTCTGATCAGATAGTCCCCTGTCAACAGTAGCAAATGTGGTTTCATAAAGTGGGAAGAAAACAGCATTTTAAAGTAACTTTTTgggagactgatttgagtaataataaaactctggtctcccTTAAGAAAAAAAAACCCTTCCACCTTTACTGTGTCATTTATATCCCCTTAGTTCCAAAGTTAATTATCTTATTTCTGGATATTGCTTTTATACCAAAGACCCTTATCAGCCCTTGTAACTACAGTATCTTTAGATAAGATTCCTCTTTCCAGTCAGTCCTGGGAAATGTTTCTGTTGCAGAGTTAGGCGGTAGATGGGAAGCTGTGATGGCAGAGCTACTATCTAATAAAGTAACAACTCGTAGTTGAGGCTTCCTTTCTGTGTGTGATGGGGGATAGGGAGTTAGCTCCCCTGTTGTCTCAGCACTAAGAAATTGAGGTCAggccaggcgcggtggttcactcctgttattccagcactggggtggccaaagtgggcagattgcttgcgctctggagctcgagaccagcctgggcaacatggtgaaaccctgtctctaccaaaaatacaaaaaaaaagctgggcatggtgggtgcatgcttgtcccagctactgaggaggctgaggtgggaggatcgcttgagcctgggaggtggaggttgcagtgagctgagatggcaccactgcaatccaaggtgggtgacagagacgctgtctcaaagaaaTTGAGGTCAGGCTTCCTTCTTACAGAATTATTTTTTTCTCTGTAGTTTGCCTCATTTTTTCACTTTCTTTTCAATGAGAATCGAAGTGTTTCTTTTGGGTTTTTTTTTCCCCCTTTTAAAATCAACAGGAAATGTTTCAAAGGAGGGATGAAATGCTTCTTGGCTTCCTCAGCACTTGGCAAGGTAGACCTCATAGCAACCTTGAATATGACTTTCTTTAGTCTCTAGCTATGCACTATTAAGTGCCTCTTGGGTAGAGGTAGAGTTAAGTATTGAGTgccagtcttgacgtccgtatgcctcagtttttctcatatataaaaagcagtatacatacctacccttttctacctcatcatttgttgtagggattaaatCCGGGAGAGCAATTCTGAAGCCTATAAATTTCCTTGAAGAGATCTAAGAACCTATTATGCTCTTGGTGTACCAAGCTCTGGGGTATATATTCAGAATACCTCATGTTCTGGAAGCTGAGCACTAGCTCCCCTTTATTGCCTGCCTGGCAGAGCCTGTTTGATTACTGCAGGCCCTTTTACCCATGCTTCTAGTTTAGGTATTCTTTCTTTGATATGAGGCTCTTGACCAGAAAAGAGTTCTTTCTCTAGGTGTTCTGAGAGAAGTTTGTAAATTTGGATAGTACATTCTATCCTGATAAAACCACCTTGCTGTGGTCTTGATGTACAAAAAAAAAttttttttttgagacagagtcttactctgtcacccaggctggaatgcagtggcgcaatcttggttcactgcaacccccgcctcctgggttcaagcgatcctcctgcctcaacctctcaagtagctgggactacaggcgtgcaccaccacacctggctaattttgtatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactcctgacctcaggcgatctgcccgccttggcctcccaaagtactgggattacaggcgtgagcaactgctcctggccCAAAACATCTCTTTCTACATACACTTGAGTAGGTGGCATAAAATGCACTGTCAATATATAGAAAACATGAAATTTTCCAAATATTTCCGATCAGAGAATCACAAGAGCAGCAAATGTGGTTTCATCAAGTGGGAAGAAAGCAGCAATTTAAAATAACTTTTTgggagactgaattgagtaataataaaacttcagtctttcgctaataataataataataataataataaCAACAACTTATTGAATGTGGCCAGCTCACTAGATGAGGAAAGAGGAAGGCATTTTCTGCATTCTTGCCTAGTTTTCCTTATAAGCACCACTAAGTTAATAGCTCTGTCTTTTTGGTGTTTGCACTATGTAATGCTTTTAATACTTTTTAATTGTGCTTTTTTATGTATTAAATGTTTTTCCTTTTGCCA |
PMID - Link | Title |
---|