Retrocopy Name | FAM133BP2 |
|
Species | Homo sapiens | |
Coordinates (hg38) | chrX:93709414-93710074 UCSC | |
Coordinates (T2T) | chrX:92154556-92155216 UCSC | |
Coordinates (hg19) | chrX:92964413-92965073 UCSC | |
Strand | + | |
Parental Sequence | XM_011516005.3 | |
Parental seq. overlap | 343 bp | |
Parental seq. overlap (%) | 9.3% | |
Genomic Region |
Intragenic (FAM133A) |
|
Retrocopy Summary | FAM133BP2, located on chrX:93709414-93710074, is a retrocopy of the parental gene FAM133B. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | FAM133B |
Full Name | family with sequence similarity 133 member B |
Also known as | - |
Coordinate | chr7:92560758-92590390 |
Strand | - |
Gene summary | Enables RNA binding activity. [provided by Alliance of Genome Resources, Apr 2022] |
>FAM133BP2 |
GGCACCATGGGGAAGCGGGATAATCGGGTAGCCTATATGAATCCTATAGCAATGGCCAGATGGAGAGGCCCAACTCAATCTGTGGGCCCAACAATCCAAGATTATCTAAATCGACCAAGACCCACCTGGGAAGAAGTAAAGAAACAATTAGAAAATAAAAAAACAGGTTCAAAAGCATTAGCTGAATTTGATCTTGTCGGTCTTCATCTTCTTCATCAAGCTCTGATTCTTCAAGCAGTTCTTCAGATTCTGAGGATGAAGAACCGTTCATACAAATCATCCCAAAGCTCTACGCATGAATCAGAATCAGAGAGCAAGGAGTCTGTATGTAAGAAGCCTCAGCAAAAAAAGAAAGAAAAGTTACCCTGATGATAAACCTTTATCATCTGAGTCCTCATCTGAATCAGATTAT |
>XM_011516005.3 |
GGAGTGGGGAGGCGGCAAGAGGACCTGCGGCAGGCCCTCTTCGGCAGTCTCTCCGGCCCGGTTTCCCTCGGCGTGCTACTGTGCGCTCGATCCAGCACCATGGGGAAGCGGGACAATCGGGTGGCCTATATGAACCCAATAGCAATGGCGAGATCAAGGGGTCCAATCCAGTCTTCAGGGCCAACAATACAGGATTATCTGAATCGACCAAGGCCTACCTGGgaagaagtaaaagagcaactagaaaagaaaaagaaaGGCTCCAAGGCTTTGGCTGAATTTGAAGAAAAAATGAATGAGAACTGGAAGAAAGAACTGGAAAAACACAGGGAGAAATTGTTAAGTGGAAGTGAGAGCTCATCCAAAAAAAGACAGAGAAAGAAAAAAGAAAAGAAGAAATCTGGTAGGTATTCATCTTCTTCTTCATCAAGCTCTGATTCTTCCAGCAGTTCTTCTGATTCTGAAGATGAGGATAAGAAACAAGGAAAACGGAGAAAGAAAAAGAAGAACCGTTCACATAAATCTTCTGAAAGCTCCATGTCAGAAACTGAATCAGACAGTAAGGATAGTTTAAAAAAGAAAAAGAAGTCAAAAGATGGAACTGAGAAAGAAAAGGATATTAAAGGACTCAGCAAAAAGAGAAAGATGTATTCTGAAGATAAACCTTTATCATCTGAGTCCTTGTCAGAATCAGAGTATATTGAGGAGGTGCGAGCAAAAAAGAAGAAAAGCAGTGAAGAACGAGAAAAAGCAACAgagataagtgggcacaagtgaggaatgatgtttgtacagcagtgatagtaatggagttggactggcaaggatggatttgagatacattttgaacttagatggtaagacttgcttggtactttgaatgcggacattggagttaaagagcagaatcagagatagcttagattctttgacctaagcaaaatgacagataagtagtgccagttactaagatggctgaggatttggagagaaaaatgaagcattttgttgtgctaatttcagatatgcctacgagacatcccaggtagagctgttaatgaggcacttatcgtcctgaggtcaaagagtaggactgaatataaagatttgggcatcattggttttaagtggaatgtaaagcatgtgactgggagagtatgtggtaaacaatggaaggaagccccagaaaagccagccagaggaagaagagccagcaaaggaaatgaagaggtctttgtgatagaagaaaaccagcagagaggtgtcatggaagctaagaagaaaatgatttttagaagagagtgctcagctgtCCTTTTATGAAAAAGCAACCTATACCCAAAACTTAGTTTTAAAAGCCCAAATTACAAGATTTTGGACTCTGTAATATTCCCTATGTACTTCAAACATGTAGTGAGAAAAGAATGTTGAAAATTAGCTTAGTGCCACAGAGTGGTAGAGGCCTTTGAGAGAGGGGAGAGTAGATAGTGCTGATAGATAGGAAATGGATAGGAAGCTCTGCTGTTACCATCCTTATAGGtctcttcttttttgcttttcattttcttctcttGAATATCAGTACACTAGCAGCAGTCTCTCATTTGGTACCACCTTTCCAAGTATCTGTGTTTCTAAAAGTTCTGCGTTCTATAACAAAAATAGGAGAGTCAGACTTCAGCAAAACTCCAGCTCCCTTCAATCCACTCACAGTTTAACTACTTCTACCGGGCATTAGTGGCATTTTCTTCTAAAAATCAGACATCTGTTTTGCTTAACAAAGTAGACTTTTTAACTATACATTGATACTTTGTACTAATTAGTTGATTTTAATTTAATAATTTAATAATTAATGACAGCAACTTCAAGTAGTGCTGCCAGTCTGAGCAGTACACAATGCCTGTGTACCTATTTACTTAAAACTGGCAAATTTAATATCTCTGTTCTGTCTGAAAACTATTTTACAAAAACAATTATGTTTTTATTTGGTTACTCCATTCCAGTAACTGCAATTACTTTACCTTTAGAAGTTATATAGCATGAAATAATAGTGATTGGTAGCATGATTCAATTGAATTTATTTCCTACAGGAAATTTTGTTAGAAGTTATGTTAATATGCTAATGACTTAAGAGTTTCTCCCTATCTTTTTGAAAATCGACAAGAACTGTTTTAGTCCTCATATGATACTGGTTGTTGAGACTTTTTGAGGAATGTTTTGAGTAGTTTTCTTGGTTGTGTGGATTGTTTGGAATTATGTGGTAGCTTAGAAGCATGGTAAAGATGCTTTTAATTTGCGTATTTTTATATAGTAATGTCTAACATGGAATTATCTTTACAGGAAaaaacaaaaaagaaaaagaagcataagaaacacagtaagaagaagaaaaagaaGGCTGCTAGTTCAAGTCCTGACTCACCATAACATTAAGAAAAATCAGGATTCCCTTATAAAGAAAGTGCAATGTCTGAGGAAATTTCAACTGTGAAAACTACAACATATTTACTAAAATGCATGAATTTTCTTGTTTTTGGAATTATTCCTGGACTATTCAGTAGCCACTCAGATGCCACTGTGTGAAAGGGCCATAAATGTTGCCTGCTGCTTGAACATCTATTTTTTTCTCTTCCAGTGCTTGATAACTCTGGGAGATAATACACTGCAGTCGTACTAGTGGTTAAGATATTTGGGAATAAAATTAATACTTTTGACTAGAAGCGTCTAAGGATAAACCAACAGAAATTGAATCTGGATACATCTTTAAGATGTAATCAGAAATGACCAGATGACTCTAGTTAGAATTTTTGAAGGAGGGATTACATTAATATTTCAAAACCCTTACTCTGTAGATAAGTGTATTTTAATTTTTTCCCCTCGTATACTTTTATTTACCTGGGGAAGGAGCTTTTAGGGTTGGGGGGTGGTTTGCTATCTCTTTAGCTAGCAGAATAGTGTGCCTTTGATCCTCACACATCCTGTATTATGGACACAGTAGCCATGCTTCACGGGGAGGTCAGAGCTGGCTACCAGCAGTCTTGCCCTTTACTGAGCTTAGTGTCATCTTTGGATGCTGTCATATGCTGCTTTGAGTGAACCAGAGAAACAGCCATTTGCAGCATGAGAAAGCCCCAAAAGCTCTGGGATTTACCTCCACTTTAGTAATAATGAATATTTTTTAGCATTAGAATGTGTTATGTCATTTGAATTAATTTTGACTACACTTTGGCTTGGGAGAGGAATTATTTTAAATAGACATTGGTACTTTTTGAACTTGATAGCTAAAGATTCTAAAATGCATGTTTTATACTAAGTTTTAACCAGTCAGGAAAATTTTATGTAACTAGTGATAGTTTATTTTTTTGTATGAATTTTGTTTAGGCTGCAATGTTTAGCTTTTGTTAACTCCTCACTCTTGCTGTCTTAAGTTCATTACTATGTTTAATGGCCTACTTGCCAAGATATTTAGCATGTAAAAAGCAGGGTTTTGATTAAAAAAAAAAAACGGCTTCATATTGAAGCTGAGACTTACAATAACAAGTTGAGTGGCAAGCCTGGTATGCTGTGTCTTATTGCCAGAATCTTAGTAAATGTAATGTTTTAAAAGTTTGTTGTCTTTGTATATTAATAACAAATTATGACAAGTTAAGTTTAAATAAGAGTTACATTATTGCTC |
PMID - Link | Title |
---|