| Retrocopy Name | Actg1P3 |
|
| Species | Rattus norvegicus | |
| Coordinates | chr3:105510379-105510697 UCSC | |
| Strand | - | |
| Parental Sequence | NM_001127449.1 | |
| Parental seq. overlap | 276 bp | |
| Parental seq. overlap (%) | 14.5% | |
| Genomic Region |
Intragenic (Actc1) |
|
| Retrocopy Summary | Actg1P3, located on chr3:105510379-105510697, is a retrocopy of the parental gene Actg1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Actg1 |
| Full Name | actin, gamma 1 |
| Also known as | Actg |
| Coordinate | chr10:109518429-109521288 |
| Strand | - |
| Gene summary | A structural constituent of postsynaptic actin cytoskeleton. Involved in response to calcium ion and response to mechanical stimulus. Is active in postsynaptic actin cytoskeleton and presynaptic actin cytoskeleton. Human ortholog(s) of this gene implicated in Baraitser-Winter syndrome and autosomal dominant nonsyndromic deafness 20. Orthologous to human ACTG1 (actin gamma 1). [provided by Alliance of Genome Resources, Apr 2022] |
| >Actg1P3 |
| CAGGGTGTCATGGTAGGTATGGGGCAGAAAGACTCCTATGTAGGTGACGAGGCTCAGAGCAAGCGAGGCATCCTGACTCTGAAGTACCCCATAGAGCACGGCATTATCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTCCGTGTGGCCCCTGAGGAGCACCCGACCCTGCTCACTGAGGCCCCACTGAACCCCAAGGCCAACCGTGAGAAGATGACACAGATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCGGTGCTGTCCCTGTACGCTTCTGGGA |
| >NM_001127449.1 |
| GGTCTCACACTTCGCCGCCGGCTTTACACTGCGTTTCTGGTTCCGTCTGCTCCGATCGATCCCGTCCTCTGCGATCGCAATGGAAGAAGAAATCGCCGCCCTCGTCATTGACAATGGCTCCGGCATGTGCAAAGCTGGCTTTGCTGGGGACGACGCCCCCAGGGCCGTGTTTCCTTCCATCGTCGGGCGCCCCCGACACCAGGGTGTCATGGTGGGCATGGGCCAGAAAGACTCGTACGTGGGTGATGAGGCCCAGAGCAAGAGGGGTATTCTGACCCTGAAGTACCCTATTGAGCACGGCATTGTCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGTGTGGCCCCTGAGGAGCACCCGGTGCTTCTGACCGAGGCCCCCCTGAACCCCAAAGCTAACAGAGAGAAGATGACGCAGATAATGTTTGAAACCTTCAATACCCCAGCCATGTACGTGGCCATTCAGGCGGTGCTCTCCTTGTATGCATCTGGGCGTACCACTGGCATTGTCATGGACTCTGGTGACGGGGTCACACACACAGTGCCCATCTATGAGGGCTACGCCCTTCCCCACGCCATCTTGCGTCTGGACCTGGCTGGCCGGGACCTGACAGACTACCTCATGAAGATCCTGACTGAAAGGGGCTACAGCTTTACCACCACTGCTGAGAGGGAAATTGTTCGTGACATAAAGGAGAAGCTGTGCTATGTTGCCCTGGATTTTGAGCAAGAAATGGCTACTGCTGCATCATCTTCCTCTTTGGAGAAGAGTTATGAGCTGCCTGATGGGCAGGTGATCACCATTGGCAATGAGCGCTTCCGGTGTCCAGAGGCTCTCTTCCAGCCTTCCTTCCTGGGCATGGAGTCCTGTGGCATCCACGAGACCACCTTCAACTCCATCATGAAGTGTGATGTGGACATCCGCAAAGACCTGTATGCCAACACAGTGCTGTCTGGTGGTACCACCATGTATCCAGGCATTGCTGACAGGATGCAGAAGGAGATCACAGCCCTGGCTCCCAGCACAATGAAGATTAAGATCATTGCTCCTCCTGAACGCAAGTACTCAGTCTGGATTGGCGGCTCCATCCTGGCCTCACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGACGAGTCAGGCCCCTCCATTGTCCACCGCAAATGCTTCTAGATGGACTGAGCAGGTGCCAGGCATCTGCTGCATGAGCTGATTCTGAAGTATCGATTTGCCCTGGCAAATGTACACACCTCATGCTAGCCTCATGAAACTGGAATAAGCCTTTGAAAAGAAATTTGTCCTTGAAGCTTGTATCTGATATCAGCACTGGATCGTAGAACTTGTTGCTGATTTTTGACCTTGTATTCAAGTTAACTGTTCCCTTGGTATATGTTTAATACCCTGTGCATATCTTGATTTAGTCCTTAGTTCATGTGGCTCGGTCACTTGGTGGCTGGGGAGATCTGTGGAAAAGTCAGTCAGTCCCCAGCCTAGTGGATCTCTGTGAGCACCATGTAGTGATCTGTGCAGGGTATTAACCAACAGCAGACTTCCAGGATTTCCCGAGGCTGGCAAGGGTTCCTGAACTAGTTACCACTTCTTTTCTTGCCAGTCTAACAGGGTGGGAAAGTCCGAGCCTTAGGACCCAGTTTCTGTTCTGGTTTTTTCCCTCCTGACCTCCATGGGTTGTTACTTGCCTTGAGTTGGGAACGTTTGCATCGACACCTGTAAATGTATTCATCCTTTTAATTTATGTAAGGTTTTTGTACTCAATTCTTTAAGAAATGACAAATTTTGGTTTTCTACTGTTCAGTGAGAACATTAGGCCCCAGCAACACGTCATTGTGTAAAGAGAAATAAAAGTGCTGCAGTAA |
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