Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Retrocopy Name Morf4l1_1P8
Plot displaying the genomic locations of a retrocopy (in chrX) and its respective parental gene (in chr4). Each line represents a retrocopy.
Species Cricetulus griseus
Coordinates chrX:43667970-43668582  UCSC
Strand +
Parental Sequence XM_027410966.2
Parental seq. overlap 495 bp
Parental seq. overlap (%) 26.5%
Genomic Region Intragenic (Morf4l2)
Retrocopy Summary Morf4l1_1P8, located on chrX:43667970-43668582, is a retrocopy of the parental gene Morf4l1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name Morf4l1
Full Name N/A
Also known as -
Coordinate chr4:199416605-199437443
Strand -
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Mouse lemur Microcebus murinus MORF4L1P4
Mouse Mus musculus Morf4l1P14
Rat Rattus norvegicus Morf4l1P14
Rabbit Oryctolagus cuniculus MORF4L1P11
Pig Sus scrofa MORF4L1P1
Cow Bos taurus MORF4L1P5
Sheep Ovis aries MORF4L1P5
Dolphin Tursiops truncatus MORF4L1P3
Horse Equus caballus MORF4L1P1
Dog Canis familiaris MORF4L1P4
Panda Ailuropoda melanoleuca MORF4L1P2
Cat Felis catus MORF4L1P4
Velvety free-tailed bat Molossus molossus MORF4L1P4
Egyptian rousette Rousettus aegyptiacus MORF4L1P1
Sloth Choloepus didactylus MORF4L1P18
Human Homo sapiens Without Homology
Chimpanzee Pan troglodytes Without Homology
Bonobo Pan paniscus Without Homology
Gorilla Gorilla gorilla Without Homology
Orangutan Pongo abelii Without Homology
Gibbon Nomascus leucogenys Without Homology
Green monkey Chlorocebus sabaeus Without Homology
Crab-eating macaque Macaca fascicularis Without Homology
Rhesus Macaca mulatta Without Homology
Baboon Papio anubis Without Homology
Golden snub-nosed monkey Rhinopithecus roxellana Without Homology
Marmoset Callithrix jacchus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>Morf4l1_1P8
CGGAGATGGTGGCAGTACCAGCGAAGTGCCCCAGCCCCCCCGGAAGAAACGGGCACGGGCTGACCCCACTGTGGAGAGTGAGGAAGCATTCAAGAATAGAATGGAAGTGAAAGTGAAGATTCCCGAAGAGCTAAAACCATGGCTGGTGGAGGACTGGGACTTGGTTACCAGGCAGAAGCAGTTGTTCCAGCTCCCTGCTAAAAAGAATGTAGATGCCATTCTTGAGGAGTATGCCAATTGTAAGAAATCACAGGGAAACGTTGATAATAAGGAGTATGCGGTTAATGAAGTTGTGGGAGGGATAAAAGAGTATTTCAATGTGATGCTGGGCACTCAGCTGCTCTACAAGTTTGAGCGGCCCCAATATGCCGAAATCCTTCTGGCACACCCAGATGCGCCAATGTCGCAGATCTATGGGGCGCCACACCTACTGAGATTATTTGTGAGAATTGGGGCAATGTTGGCCTATACGCCCCTTGATGAGAAAAGCCTGGCATTATTGTTGGGCTATTTGCATGATTTCCTTAAATATCTGGCAAAGAATTCTGCCTCTCTGTTCACTGCCAGTGATTACAAAGTGGCTTCTGCTGACTACCATCGCAAAGCCCTGTGA
>XM_027410966.2
TAGAGCTGGCTGTTCCCGACGGCGTTTCTGACGCTAAGTTGGGTGGGGTAGAGAGTAGGGGGCGGTAGTCGGGGGTggtgggagaaggaggaggcgGCGAATCACTTATAAATGGCGCCCAAGCAGGACCCGAAGCCCAAATTCCAGGAGGGTGAGAGAGTGCTGTGCTTTCATGGGCCTCTTCTCTATGAAGCAAAGtgtgtaAAGGTTGCCATAAAGGACAAACAAGTGAAATACTTTATCCATTACAGTGGTTGGAATAAAAATGCTGTGAGGCCCAGGCGCTCTGAAAAATCTTTGAAGACACGTGAGGATATTGTAGCCCTTTTTCCTGTTCCTGAAGGAGCTCCCTCAGTACACCACCCCCTCCTGACCTCTAGTTGGGATGAATGGGTTCCAGAAAGCCGAGTCCTCAAATATGTGGACACCAATTTGCAGAAACAGCGAGAGCTTCAAAAGGCCAATCAGGAACAGTATGCAGAGGGCAAGATGAGAGGGGCTGCTCCGGGAAAGAAGACATCTGGTCTGCAACAGAAAAATGTTGAAGTgaaaacaaaaaagaccaagcAGAAAACACCCGGAAATGGAGATGGTGGCAGTACCAGTGAGACACCTCAGCCTCCTAGGAAGAAAAGAGCCCGGGTAGATCCAACTGTTGAAAATGAAGAAACATTCATGAACAGAGTTGAAGTTAAAGTAAAGATCCCGGAAGAGCTGAAACCATGGCTTGTGGATGACTGGGACTTGATCACCAGACAAAAACAGCTTTTTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTTTGGAGGATTATGCAAACTATAAGAAATCTCGAGGAAATACAGATAATAAGGAGTATGCTGTTAATGAGGTTGTGGCAGGGATAAAGGAGTACTTCAATGTAATGCTGGGCACTCAGCTACTCTACAAATTTGAGAGACCACAGTATGCTGAGATTCTTGCAGATCACCCTGATGCACCCATGTCCCAGGTGTATGGAGCACCACATTTACTGAGATTATTTGtGCGAATTGGAGCGATGTTGGCCTATACACCTCTAGATGAGAAAAGCCTTGCTTTATTACTGAACTATCTACATGATTTCCTCAAgtacCTGGCGAAGAATTCTGCAACTTTGTTCAGTGCCAGTGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCCGTGTGAGGGGCGTGctcacgctctctctctctctctctctctcactcgtGCTTGGATCTCTGTAAACAGTTTGATTCTTAGTCCTTCTCTTGTACAAATGCTGTACTTTGAAGACCATTAGTGTATAACAAttgatgtttgttttctgtttgatttaaacagagaaaataaaaggagtcagtgctccttttcttctttcttttcatttcaaagttTCTACCAGTGTATTCAGTGATGGACAACAGAGAGACATGCTGTAGAGTGTTTTATTGCCTAGTTGACAAAGCTGCTTTTGAATGCTGGTGGTTCTGTTCCTTTGACACTACGCACTTTTATAATATGTGTTAATGCTCTATGACAAAATGCTCTGATTCCTAGTGCCAAAGGTTCACTTCAGTGTATATAACTGAACACTCATCCAtctgtgctctttttttttttaatggtgcttAAAGAGCCCATCCTTTGCAAGTCATCCATGTTGTTCCTTAGGTATTTTATCTTTGCTTAATTGTTAAAAAATGGTGGCTTGTTTCATggtttttgtatttgtgtctaATGCACGTTTTAACATTATAGACGCAATGCATCGTGTAGCTACAGTTTTATGGAAAAGTCAATCTTGTAGGAGTTGTTTTTCAGATCTTcaataaattttttctttaaatttcaa

Publications

PMID - Link Title