Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Retrocopy Name ZNF195P5
Plot displaying the genomic locations of a retrocopy (in chr5) and its respective parental gene (in chr14). Each line represents a retrocopy.
Species Macaca mulatta
Coordinates chr5:267478-267627  UCSC
Strand -
Parental Sequence XM_028833083.1
Parental seq. overlap 122 bp
Parental seq. overlap (%) 4.2%
Genomic Region Intragenic (LOC716016)
Retrocopy Summary ZNF195P5, located on chr5:267478-267627, is a retrocopy of the parental gene ZNF195. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes.

Parental Gene

Gene Name ZNF195
Full Name zinc finger protein 195
Also known as -
Coordinate chr14:3325211-3350986
Strand -
Gene summary N/A

Homology

Species Scientific Name Retrocopy
Human Homo sapiens ZNF66P2
Bonobo Pan paniscus ZNF479P5
Gorilla Gorilla gorilla ZNF66P8
Orangutan Pongo abelii LOC100451404P2
Gibbon Nomascus leucogenys LOC100607920P2
Green monkey Chlorocebus sabaeus LOC103226004P2
Crab-eating macaque Macaca fascicularis ZNF195P3
Baboon Papio anubis LOC103880007P3
Golden snub-nosed monkey Rhinopithecus roxellana LOC104663107P1
Marmoset Callithrix jacchus LOC100400163P2
Mouse lemur Microcebus murinus LOC109730344P2
Chimpanzee Pan troglodytes Without Homology
Mouse Mus musculus Without Homology
Rat Rattus norvegicus Without Homology
Chinese hamster Cricetulus griseus Without Homology
Rabbit Oryctolagus cuniculus Without Homology
Pig Sus scrofa Without Homology
Cow Bos taurus Without Homology
Sheep Ovis aries Without Homology
Dolphin Tursiops truncatus Without Homology
Horse Equus caballus Without Homology
Dog Canis familiaris Without Homology
Panda Ailuropoda melanoleuca Without Homology
Cat Felis catus Without Homology
Pale spear-nosed bat Phyllostomus discolor Without Homology
Velvety free-tailed bat Molossus molossus Without Homology
Greater mouse-eared bat Myotis myotis Without Homology
Kuhl's pipistrelle Pipistrellus kuhlii Without Homology
Greater horseshoe bat Rhinolophus ferrumequinum Without Homology
Egyptian rousette Rousettus aegyptiacus Without Homology
Sloth Choloepus didactylus Without Homology
Tasmanian Devil Sarcophilus harrisii Without Homology
Opossum Monodelphis domestica Without Homology
Platypus Ornithorhynchus anatinus Without Homology
Chicken Gallus gallus Without Homology
Turkey Meleagris gallopavo Without Homology
Zebra Finch Taeniopygia guttata Without Homology
Budgerigar Melopsittacus undulatus Without Homology
Painted Turtle Chrysemys picta Without Homology
Lizard Anolis Carolinensis Without Homology
Frog Xenopus tropicalis Without Homology
Zebrafish Danio rerio Without Homology
Drosophila Drosophila melanogaster Without Homology

Expression

Related Sequence

>ZNF195P5
ACTAAGCATAAGAGAATTCATGCTGAAGAGAAACCCTTCACATGTGAAGAATGTGGCAAAATCATTACCTCATCCTCAAACGTTGCCAAACATAAGAAAATTCATACCAGAGAGAAACTCTACAAATGTCAGGAATGTGGCAAAGCCTTT
>XM_028833083.1
GGGCCTTTGTCCAGACAGAGTTCCACTTCCTGTCCCCGCCGCTCTGCGTCCTCTGCTAGCCGTTGGCCGTGTGACCCGACCCGCAGGCACCGGGAGATCCAGAAGTGAAACGTCAGGCTCCCTGGAGACCAAGAGATGTGCTTTTAGAGACATCGCATCCAGCAACCTGTTTCTCAGTCCTGTGGGTCTAATAGTTGCTTCACAAGCCACAAGAAAGTGAGGATAAACGCAACAATGGAAAGTACCTCCGCACTGTACTTCATCCTCTCTGTATCCCTTCCATCGGTGTGATTTGTCCAGAGATCTTTCCTAAGAGGAAATCCCAGAGAAGCAGGAGAAAGAGAAAGAAATGGCTGGTGCTCAGACACTGTTGACGTTCAGGGATGTGGCCATAGAATTCTCCCTGGAGGAGTGGAAATGCCTGGACCCTGCTCAGCAGAATTTGTACAGGGATGTGATGTTGGAGAACTACAGAAACTTGTTCTCCATTGGTCTCACTGTCTCTAAGCCAGGCCTGATCACCTGCCTGGAGCAAAGAAAAGAGCCCTGGAATGTGAAGAGACAGGAGGCAGTAGACGGACATCCAGagatgggatttcaccatgctactcaggcttgtctcaaactcctgggctcaagcgatctgcccgcctcagcctcccaaagtgctgagattacaggtgtgaaccactgtgcccagcctgccctcaaggtttctgtggacaaattcactgCTATGTCTTCTCATGTTACCCAAGACCTTTTGCCAGAGCAGGGCATACAAGATGCATTCCCAAAATCAATACTGAGAGGATATGGAAATTGTGGCCTTGATAATTTACATTTAAGGAAAGACTGGGAAAGTTTAAATGAGTGTAAGTTGCAAAAAGATTATAATGAACTTAACCAATGTTCATCAACTACCCATAGCAAAATCTTTCAATGTAATAAATACGTTAAAATCTTTAATAACTTTTCAAATTTGCATAGACATAATATAAGTAATACTGGAGAGAAACCTTTCAAATGTCAAGAATGTGGCAAATCCTTTCAAATGTTCTCATTCCTAACTGAACATCAGAAAATTCACACTGGAAAAAAATTGCAAAAATGTGGAGAATGTGGCAAAACCTTTATACAGTGCTCACACTTTACTGAACATGAGAACATTGACACTGGAGAGAAACCTTACAGATGTCAAGAATGTGACAAAGTTTTTAAAACTTGCTCAGTCCTTACTAAAAATAGAATTTACGCTGGAGGGGAACATTACAAATGTGAAGAATTTGGCAAAGTATTTAACCAGTACTCCCACCTTACTGAACATGAGCGTGGTACTGAGGAAAAACCCTGCAAATATGAAGAGTGCAGCAGTGTCTTTATATCTTGCTCAAGCCTTTCTAATCAACAGCTGATTCTTGCTGGAGAGAAGCTCTCCAAATGTGAAACATGGTACAAAGGTTTTAACCACAGCCCAAATCCTTCCAAACATCAGAGAAATGAGATTGGAGGGAAACCTTTCAAATGTGAGGAATGTGACAGCATCTTCAAATGGTTCTCAGACCTTACTAAACATAAGAGAATTCACACTGGTGAGAAACCCTACAAATGTGAAGAATGTGGGAAAGCCTATACGCAGTCCTCACACCTCAGTGAACACAGGAGGATTCACACCGGAGAGAAACCCTACCAGTGTGAAGAATGTGGGAAAGTCTTCAGAACTTGCTCAAGCCTTTCTAATCACAAGAGAACTCATTCTGAAGAAAAACCCTACACGTGTGAAGAATGTGGCAACATCTTTAAGCAGTTATCAGACCTCACTAAGCATAAGAAAACCCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGAAAGAACTTTACCCAGTCCTCAAACCTTATTGTACATAAGAGAATTCATACTGGAGAGAAACCCTACAAGTGTGAAAAGTGTGGCAAAGCCTTCACCCAATTCTCACACCTGACTGTACATGAAAGCATTCATACTTGAGAAAAAAAAAATATAAAAATAGGCACAGCCTTTAGTATCTGCTCGCATCCTACTTTACATCAGTTTGGACGTAACAAAGTTATTATAAATTTAATTACTATTGAAAGACCTTTCATGAAATATAAGTCTCCAGAGCACACAAGAGTATTTCTTCTGAAAAAAAATGTTACAATTATGTTTTATACTAGATGGAAGACATGCAACAGTTGCTTAAACTTCCAGAGAATTTGTAGAGAAACCCAACAAATATCATAACTGTGGAATAACATTTGTTCAAAAACGATAGCTTAGAAAACATCAGAGTTCATACTAAAAGATATTTTGCAAATACAGTAAATGGGAAACATAAGCAAAATTCAATTTAAGTAAACATTGGAGGATTTGAAGAAGAGAGGAACAGAGCACGGACGCGTTCTAAGTAAACACTGGAGGATTTGAGGAAGAGAGGAACAGAGCACGGACACGTTCGGAAACGACAGTGAATCCGTGTGTTGAGTCTACGGGGACATCTCGACTTGAAGTAGATCGTTCATTCTTATTTAAGTTTAAAAGGAGGATGAGACTGAGTTTTTGTAGAGTTATAATTACATTCAAAATACACGTTTTTGCATTGAAAAATGTTAAATTTTTGAAAAGCGAATATTGATGTCTTTTAATCCTCGAATCAGTTCATGCTGTGTCTTCATTTCTGGTGCTGATGTGAAAACACATGGTCAGTTGTTGCTGCATCAGAGATGTGAGAAATTCTCTTCTGTTAGGTGTGCATCACTGATATACTTGTCCATGAAAGGTGAAAGACACTGAAATGTAAGATGCGTGAGTAAAATCTTGGTAGAGGCTGTTTGTGGTTGTTTTA

Publications

PMID - Link Title