| Retrocopy Name | GkP1 |
|
| Species | Mus musculus | |
| Coordinates | chr5:97603397-97604245 UCSC | |
| Strand | - | |
| Parental Sequence | NM_008194.3 | |
| Parental seq. overlap | 719 bp | |
| Parental seq. overlap (%) | 16.6% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | GkP1, located on chr5:97603397-97604245, is a retrocopy of the parental gene Gk. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Gk |
| Full Name | glycerol kinase |
| Also known as | D930012N15Rik|Gyk |
| Coordinate | chrX:84745543-84820425 |
| Strand | - |
| Gene summary | Enables glycerol kinase activity. Acts upstream of or within glucose homeostasis; glycerol metabolic process; and regulation of fatty acid metabolic process. Located in cytosol; mitochondrion; and nucleus. Is expressed in several structures, including brain; brown fat; genitourinary system; heart; and liver. Used to study glycerol kinase deficiency. Human ortholog(s) of this gene implicated in glycerol kinase deficiency. Orthologous to human GK (glycerol kinase). [provided by Alliance of Genome Resources, Apr 2022] |
| Species | Scientific Name | Retrocopy | |
 |
Human | Homo sapiens | GK2 |
 |
Chimpanzee | Pan troglodytes | GKP3 |
 |
Bonobo | Pan paniscus | GKP3 |
 |
Gorilla | Gorilla gorilla | GKP2 |
 |
Orangutan | Pongo abelii | GKP2 |
 |
Gibbon | Nomascus leucogenys | GKP2 |
 |
Green monkey | Chlorocebus sabaeus | GKP2 |
 |
Crab-eating macaque | Macaca fascicularis | GKP2 |
 |
Rhesus | Macaca mulatta | GKP2 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | GKP1 |
 |
Marmoset | Callithrix jacchus | GKP1 |
 |
Rat | Rattus norvegicus | GkP1 |
 |
Cow | Bos taurus | GKP2 |
 |
Horse | Equus caballus | GKP1 |
 |
Dog | Canis familiaris | GKP4 |
 |
Panda | Ailuropoda melanoleuca | GKP2 |
 |
Cat | Felis catus | GKP1 |
 |
Greater mouse-eared bat | Myotis myotis | GKP1 |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | GKP2 |
 |
Egyptian rousette | Rousettus aegyptiacus | GKP1 |
 |
Baboon | Papio anubis | Without Homology |
 |
Mouse lemur | Microcebus murinus | Without Homology |
 |
Chinese hamster | Cricetulus griseus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Pig | Sus scrofa | Without Homology |
 |
Sheep | Ovis aries | Without Homology |
 |
Dolphin | Tursiops truncatus | Without Homology |
 |
Pale spear-nosed bat | Phyllostomus discolor | Without Homology |
 |
Velvety free-tailed bat | Molossus molossus | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >GkP1 |
| GATGTAACAAATGCATGCAGAACGATGCTTTTTAACATCCACTCTTTGGAATGGGAtaaagatctctgtgacttttttGAAATTCCAATGAGCATCCTCCCAAATGTATGCAGTTCTTCTGAGATCTATGGCCTGATGACATCAGGGGCCTTGGAAGGCGTGCCAATATCTGGATGTTTGGGGGATCAGTCTGCTGCTTTAGTGGGACAAATGTGTTTCCATGAAGGTCAAGCCAAAAACACATACGGAACAGGCTGTTTTTTACTATGTAATACAGGCCAGAAATGTGTGTTTTCTGAACATGGCCTTCTGACCACATTGGCTTACAAACTAGGCAAAAATAAGCCAGTTTTTTATGCCTTAGAAGGTTCTGTTGCTATAGCTGGTGCTGTTATTCGCTGGCTAAGAGACAATTTCGAAATTATAACAACCTCAGGGGAAGTTGAAAATCTTGCAAGAGAGGTAGGCACTTCCTATGGCTGCTACTTTGTCCCAGCCTTTTCGGGGCTGTATGCACCTTACTGGGAACCCAGTGCAAGAGGGATAATCTGTGGTCTCACTCAGTTCACCAACAAATGCCATATTGCCTTTGCTGCGTTAGAAGCTGTTTGTTTCCAAACCCGAGAGATTTTGGATGCCATGAATCGCGACTGTGGAATTCCACTCAGTCATTTGCAGGTCGATGGAGGAATGACCAACAACAGGATTCTTATGCAGCTACAGGCAGATATTCTGCACATTCCGGTAGTTAAGTCTGTCATGCCTGAAACGACGGCCCTGGGAGCTGCCATGGCAGCCGGAGCTGCAGAAGGGGTAAATGTTTGGAGTCTTGAACCTGAAGATTTGTCT |
| >NM_008194.3 |
| GTCTCACAACCCTCAGACTGGCCTGCTCCTGGGTCTCTTTCTGTAGTCGCTCATTGGCCCGCCCGGAAGACAGCGCCCCCCCATTTGCCACGCCTCCCAAGGCCTAGGAGAATGCAGGTCGGGGCGGGGCCTGAGCTGGAGGGGCGGGGCGACGCGGCCGGGCGGGAGTAAAGGGGCTGCCTAGGAGCCGCGCGAGCCTTCAGCAGAAGCGCGCTGCTTTGCCCTCCGCTGTCCCTGCTCCGCCCTCCGCAGCCCTCCACAGTCACCCCGGAGACCAGCCGTGTTAAGCTCTCTGCTCTGAAGCTGACTGACTTCCATGGCAGCCGCGAAGAAAGCAGTTCTGGGGCCATTGGTGGGAGCAGTGGACCAGGGTACCAGCTCGACACGTTTTTTGGTTTTCAATTCAAAAACAGCTGAACTTCTTAGTCATCATCAAGTAGAAATAAAACAGGAATTCCCAAGAGAAGGATGGGTAGAACAAGACCCGAAGGAAATTCTGCAGTCTGTTTATGAGTGTATAGAGAAAACGTGTGAGAAACTTGGACAGCTCAATATTGATATTTCCAACATCAAAGCCATTGGTGTCAGCAACCAGAGGGAAACCACAGTAGTCTGGGACAAGGTCACCGGAGAGCCTCTCTATAATGCCGTGGTGTGGCTTGACCTAAGAACCCAGTCTACTGTTGAGAACCTTAGTAAAAGAATTCCAGGAAATAATAACTTTGTCAAGTCCAAGACAGGCCTTCCACTTAGCACGTATTTCAGTGCAGTGAAACTTCGTTGGCTCCTTGACAACGTGAAAAAGGTCCAAGAGGCTGTTGAAGAAAATAGAGCTCTTTTTGGGACCATTGATTCATGGCTTATTTGGAGTTTAACAGGAGGAATCCATGGGGGTGTCCACTGTACAGATGTAACAAATGCAAGCAGGACGATGCTTTTTAACATTCATTCTTTGGAATGGGATAAAGAGCTCTGCGAATTTTTTGGAATTCCAATGGAAATTCTTCCCAACGTTCGGAGTTCTTCTGAGATCTATGGCCTAATGAAAGCTGGGGCCTTGGAAGGTGTACCAATATCTGGGTGTTTGGGGGACCAGTCTGCTGCTTTGGTGGGACAAATGTGCTTCCAGGATGGACAGGCCAAAAACACGTATGGAACAGGGTGCTTCTTATTGTGCAACACGGGCCATAAGTGTGTATTTTCTGAACATGGCCTCCTGACAACCGTAGCATATAAACTTGGCAGAGACAAACCTGTGTATTATGCGTTGGAAGGTTCCGTGGCTATAGCTGGTGCTGTAATCCGCTGGCTAAGAGACAACCTTGGAATTATTAAGTCCTCTGAGGAAATTGAAAAACTTGCTAAGGAAGTAGGTACTTCTTATGGCTGCTACTTCGTTCCAGCATTTTCAGGGTTATATGCGCCTTATTGGGAGCCCAGTGCAAGAGGGATCATCTGTGGACTCACTCAGTTCACCAATAAATGTCATATCGCTTTTGCTGCACTAGAAGCTGTTTGTTTCCAAACCCGAGAGATTTTGGATGCCATGAATCGCGACTGTGGAATTCCACTCAGTCATTTACAGGTAGATGGAGGAATGACCAGCAATAAAATTCTTATGCAGCTACAAGCAGACATTCTGTATATTCCAGTAGTGAAACCCTCCATGCCTGAAACAACTGCACTAGGCGCTGCCATGGCAGCTGGGGCTGCAGAGGGGGTTGGTGTGTGGAGTCTTGAACCTGAGGATTTGTCAGCTGTCACAATGGAGCGGTTTGAACCTCAGATCAATGCTGAAGAAAGCGAAATCCGTTACTCCACATGGAAGAAAGCTGTGATGAAGTCAATTGGTTGGGTTACAACTCAGTCTCCAGAAAGTGGTATCCCATAAATAATACCACCTCACGGATTTCCAAGATGCAAGCTTTTTAATGTGATATGAAAATCTGACTATTCTGTCTCATAGTATAATGATGCTATTCATAGACTCTGATTTTTTTCATAAGCCACTGGCTGCATGATCCTCTAAGCAGACCTATGACTTGAAATAAAGAAAGTGCAGCAGAAAGAATCCTCcagaaacatttaatttttttttaacattgacaGTTAAGATCGGGTCAGTCACCTTtgaggctgacctctgcctccacTGTCATGATGTCCTACACTATTCCCGTTAAGGTCTAGGGTGATTTTGTATCCTGTCTATTGAAATGTGCCATTCAGTATATTCAGATGCTAGTGGATTACACATGTTTGAGGAAGAGGTTGTTACTAACCTGTTCAAAATGAGTGGcttcttgcttgtttgcttttaacAGCTCAGATGTCTTCTTTTCTATATATTAGAAGGCCACAACATTACTGGATATTTCAAATGGAAACATCTAAAGAATTGTTGGATAATGATTTGCTATTCTTGTGGCTTAGACATTTTCTGTACAGTGTTTGCCAAAATTCAACCTTGTCAGGTGTTTTACACTGTCCACTAACTACCATAGCTTTCTGTCTGGCTCTTACAGGAtagaacactttctttttctgcttttttttcatttctcctttttatatttttattctgtatGTATAACATACAtgcctatatattttatatgctgaGAGTAACCCATTTATAAATTAAGAGCACATTATATTCAATAAGTTATAAGAGGGCTGGTCTTAAGTGGACTACTATGTATATAAATTGGGGGAGGGCAAGCTGTATACATTTTTGGGCAACGGTTATGCATATTATTTAccagaagaaaattttcttataAAATCAAACATTTGAAACTTAAGTATGTATTCAGTCAATTAAAATGTACTATATTGTAATTTCAACTATATTTCTTATACTCTACCATTTAATTATCTCAGCTGGAAGAAAAGCAACTGTGGCATGTAACAGTAAATACTCTTCTCAAACATGATTCTAGTCCAAATAAAATTTTTCCTTTGAATTGATGTTTTCCATATTTGAGCTCCTATTGAAGAATTATCAAATTCAAAAGCTAAGGGGAAAAATATGTGTGAATAAAGCCAATAATGCCTTTTAAATGTTATTACCCATTAATAAGATGTTCTTATTTTCTGGTATGATAGAAAATTATGTCTACTTAataactgacaaaaaaaaaacaagtatcaTTGCAAATGCCTCACAGTATAACCAGTAACTTCTCAAATATTTAGAAGGATTGGTTATAACTCATTAACCTAGCTTCCTAAcatcaattttaaaatgtatttgttttatagtaaaaaaaaaagaaaaggatactttataattgttttgttttgtcattttggAATGGAAAATATTGATATCTTAATAGAAAAAGTTTTATTTGGAATTAATGGTAGATTGTCCTTCCCCTCTGCATGTGCTGCTCCCAATGACTGAAGCTGCTCGGTGTCACTGATACAGCTGCCACTTACGTGACATCAATATAGAAAGATCCTGTGAAGTTATTATGGCAGTGATACTTTTAAACTTAGTTATATTTCTACAAGGGCAGGTTGAGTTCATTGTAAATAATTGTGTAAATCACTGTtctagtaatttaaaaataacattaattttTCTACAAAATGCGAGATTTATAAATGTTTGAAATTGTACCTATTGATAATTAATGGTAAGTttacttaaaataaatgtatCCCTTATTTCTTATCTGCATTTCTCATTTCCAGATGAAAGTTTAGTTATCAGAGATGTTTCAGCACACACAAAAGCCACTTTTCAGTACTTGTTCACATGCACTGACGAGCTAATTAGCAGCAGAAGTGGTTTCTGGAATGATGAACACCTTAATCATTCTGTTAGAACAGATTAGACAGTTCCTACCTCAGCATTTTCAGAAAACACACTTTCAAGGCCAAAAGCCATCATCATCAGTAGAGTCTCCCCTTGCTGAGACCTAATTATCTCCGGGGTTCCATCCTTTACCTCAGCTTCTGTCTAGCTGGGTTAGTCAGTGAGGCCTGGAACACTGTTGCTCTTTCATACTAATGCCAACATCACCACATTTTGTTCTCCCATTGATCCGTAAAATAAATAATGCATTAATGCTTCTTCATTGgtaccccccccttttttttgagacagagtctcactatgtaggcctgactgttttttgagacagagtctcactatgtaggcctgactgtcctacaactcactctgtataccaagctggccttgaattcatagagatctgcctgcctctgtctcttccaactgctgggaataaagacatatgccaccatgcaCAGACcatcaaatcttttttaaaattttcttgtgGAGTATTAAAATTAAGtagctttta |
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