| Retrocopy Name | Actg2P1 |
|
| Species | Mus musculus | |
| Coordinates | chr13:111391715-111392796 UCSC | |
| Strand | + | |
| Parental Sequence | NM_009610.2 | |
| Parental seq. overlap | 853 bp | |
| Parental seq. overlap (%) | 64.8% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Actg2P1, located on chr13:111391715-111392796, is a retrocopy of the parental gene Actg2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Actg2 |
| Full Name | actin, gamma 2, smooth muscle, enteric |
| Also known as | ACTA3|Act-4|Act4|SMGA |
| Coordinate | chr6:83489891-83513233 |
| Strand | - |
| Gene summary | Predicted to enable ATP binding activity. Located in cell periphery. Is expressed in alimentary system and genitourinary system. Human ortholog(s) of this gene implicated in megacystis-microcolon-intestinal hypoperistalsis syndrome. Orthologous to human ACTG2 (actin gamma 2, smooth muscle). [provided by Alliance of Genome Resources, Apr 2022] |
| >Actg2P1 |
| ATGTGCAAGGCAGGTTTTGGGGGTGACGATGCCCCCCGTGCTGTGTTCCCCTCCATGGTTGGTCGTCCACGACACCAGGGGGTCATGGTAGGCATGGGCCAGAAGGACTGTTATGTGGGAGATGAGGCCCAGAGCAAGCGAGGCATCTTGACCTTGAAGTATCCCATTGAACACGGAGTCGTCACCAACTGGGATGATATGGAGAAGATCTGGTACCACACTTTCTACAATGAGCTCCGGGTAGCACCGGATGAACATCCTATTCTTCTCACCGAGGCACCCCTTAACCCCAAAATCAACCGGGAAAAGATGACTCAGATAATGTTCGAGGCTTTCAACACACCTGCCATGTATGTAGCAATCCAAGCCGTGCTATCCCTCTATGCTTCCGGAAGGACTACAGGTATCGTGATGGATTCTGGGGATGGGGTCACTCACACTGTGCCTATCTATGAAGGTTACGCTCTGCCTCATGCCATTCTACGACTAGATCTGGCAGGTAGGGACCTGACTGATTACCTCATGAAGATTCTGACAGAACGAGGCTATAACTTCACCACCACAGCAGAGAGGGAGATCGTGCGGGATGTCAAAGAAAAGTTGTGCTACGTGGCCCTGGACTTTGAGCAGGAGATGGTCACTGCAGCCGCTTCATCCTCACTAGAGAGAAGCTATGAGCTCCCTGATGGGCAGGTGATCACCATTGGAAATGAACGCTTCCGGTGCCCAGAAGCCATTTTCCAGCCTTCCTTTCTAGGCATTGAATCCAGAGGCATCCATGAGACAACCTTCAACTCGATCATGAAGTGTGATGTAGATATTCGTAAGGATTTATTTGCCAACACTGTGCTGTCTGGAGGCAGTACCATGTACCCAGGCATTGCCGACAGGATGCAGAAGGAAATTGTAACCTTGGCACCAAGTACCATGAAAATTAAGATCATAGCTCCCCCAGAACGCAAGTATTCGGTTTGGATTGGGGGCTCCATCCTCGCCAGCCTGTCCACATTCCAGCAGATGTGGATCAGTAAGCAGGAATATGACGAAGCTGGACCTCCCATTGTTCATAGAAAATGCTTCTA |
| >NM_009610.2 |
| ATATTGCTCTGGTATTTCTGCCAAAGACACCACGGCCCTCAGTCTCTCGGAGAAGGACTTCTCACACCCTTGGTGCTCCAGCCCCCAGCTCATTCCACCGCTCCCACCATGTGTGAAGAAGAGACCACCGCCCTTGTGTGTGACAATGGCTCTGGCCTGTGCAAGGCAGGCTTTGCAGGAGATGATGCCCCCAGGGCTGTCTTCCCCTCCATTGTGGGCCGCCCTAGACATCAGGGTGTgatggtgggaatgggccagaaAGACAGCTATGTGGGGGACGAGGCTCAGAGCAAGCGTGGGATCCTAACTCTCAAGTACCCTATTGAACATGGCATCATCACCAACTGGGATGACATGGAGAAGATCTGGCACCACTCCTTCTACAATGAGCTTCGAGTAGCACCAGAAGAGCACCCCACCCTGCTCACAGAGGCCCCCCTAAACCCCAAAGCAAACAGAGAGAAGATGACCCAGATCATGTTCGAAACCTTCAATGTCCCTGCCATGTATGTTGCTATTCAGGCTGTGCTCTCACTCTATGCATCCGGCCGTACCACAGGCATCGTTCTGGATTCGGGGGATGGCGTCACCCACAATGTCCCCATCTATGAGGGCTATGCACTGCCCCATGCCATCATGCGTCTTGACCTGGCTGGACGGGATCTCACAGACTACCTCATGAAGATTCTCACAGAAAGAGGCTATTCCTTTGTGACCACAGCTGAGAGAGAAATTGTACGAGACATCAAGGAGAAGCtgtgctatgtagccctggatttcGAGAATGAGATGGCCACAGCAGCTTCATCTTCTTCCCTGGAGAAAAGCTACGAGTTGCCTGATGGGCAGGTCATCACTATTGGCAACGAGCGCTTCCGCTGCCCGGAGACCCTCTTCCAGCCTTCCTTCATTGGCATGGAGTCAGCTGGAATTCATGAAACAACATACAATTCCATCATGAAGTGTGACATTGACATCCGCAAAGATTTGTATGCTAACAATGTCCTCTCTGGGGGCACTACCATGTACCCTGGCATTGCTGACAGGATGCAGAAGGAAATCACAgccttggctcccagcaccatgaAGATCAAGATTATCGCTCCTCCTGAGCGGAAGTACTCAGTCTGGATTGGCGGCTCCATCCTggcctctctctccaccttccagCAAATGTGGATCAGCAAGCCAGAGTATGATGAGGCAGGGCCCTCCATTGTCCACAGGAAATGCTTCTAAAGTCAGAGGGCCTTCTCTGGGGATCCCCACAAGACTGCTGTCACCAGCCACAGATCATTAAAACCTTCAAGCCTTA |
| PMID - Link | Title |
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