Retrocopy Name | PDHA1P1 |
|
Species | Oryctolagus cuniculus | |
Coordinates | chr15:54068522-54069584 UCSC | |
Strand | - | |
Parental Sequence | XM_002719941.3 | |
Parental seq. overlap | 884 bp | |
Parental seq. overlap (%) | 27.1% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | PDHA1P1, located on chr15:54068522-54069584, is a retrocopy of the parental gene LOC100357349. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | LOC100357349 |
Full Name | N/A |
Also known as | PDHA1 |
Coordinate | chrX:5084333-5100600 |
Strand | + |
Gene summary | N/A |
>PDHA1P1 |
CATGAGGGAGATGCTGGCTGCCTTTGTCTCCCGTGTGCTGTGGGGGGTGGCCAAGAAGCCAGCTCGCAGAGTGCTGGTGGCATCCTGTAACTATTCAAATGATGCCATGTTTGAAATTAAGAAATGTGATCTTTATTTGTTGGACGAGGGTCCTCCGCTGACTGCAGTGCTCACGAGAGAAGACGGGCTCAGATACTACAAGATGATGCAGGTTGTTCGGCGCATGGAATTGAAAGCCGATCAGTTGTATAAACAGAAATTTATTCGTGGTTTCTGCCATTTGTGTGATGGGCAGGAAGCTTGCTGTGTGGGGCTTGAGGCAGGTATAAACCCCTCGGATCACGTCATCACATCCTATCGGGCGCATGGCGTGTGCTACACTCGTGGACTCCCTGTCCGGTCAATCCTTGCAGAGCTGACAGGCAGAAGAGGAGGCTGTGCTAAAGGCAAGGGAGGATCGATGCATATGTATGCCAAGAACTTCTATGGGGGCAATGGCATTGTGGGTGCCCAAGTACCCCTGGGAGCTGGTGTCGCTCTGGCCTGTAAGTACATGGGAAACAACGAGATCTGCCTGACTTTATATGGGGATGGCGCAGCTAATCAGGGTCAGATAGCCGAAGCTTACAATATGGCAGCTTTATGGAAACTACCTTGTATTTTCATCTGTGAGAATAACCTCTATGGAATGGGGACATCGGTTGAGAGAGCAGCAGCCAGCACTGACTATTACAAGAGAGGCCATTTTATCCCTGGGCTAAGAGTGGATGGAATGGATATTCTGTGTGTTCGGGAGGCAACGAGGTTTGCAGCCAACTATTGTAGATCTGGAAAGGGGCCCATACTGATGGAGCTGCAGACCTACCGTTATCATGGACACAGTATGAGTGATCCTGGCATCAGTTACCGTAGCCGAGAAGAAATTCAAAAAGTAAGAAGCAAGAGTGATCCTATTATGCTTCTCCAAGATAGGATGGTGAACAGCAAGCTTGCCAGTGTGGAAGAATTAAAGGAAATCGACTCTGAAGTGAGGAAAGAAATCGAGGATGCAGCCCAGTTTGCT |
>XM_002719941.3 |
TAAGGCGTGGCTTCTGCTGGGGCGCCTGAAGGAGACTTGGGGTCGGCTTAGCAGTTCCCCTTGGGCAGTTTGGGAGTCGCCGTTGTTGCAGCTTCTTTGCGCTCCATGAGGAAGATGCTGGCCGCTGTCTCCCGCGTGTTGTCTGGCGCTGCCCAGAAGCCGGCAAGCAGAGTGCTGGTGGCATCCCGTAATTTTGCAAATGATGCTACCTTCGAAATTAAGAAATGTGACCTTCACCGGCTGGAAGAGGGCCCTCCTGTCACGACAGTGCTCACCAGGGAGGATGGGCTCAAGTATTACAGGATGATGCAGACTGTGCGCCGAATGGAGTTAAAGGCAGATCAGCTGTATAAGCAGAAGATTATTCGTGGTTTCTGTCACTTGTGTGATGGTCAGGAAGCTTGCTGTGTGGGCCTGGAGGCCGGCATAAATCCCACGGACCACCTCATCACAGCCTATCGGGCTCACGGCTTTACCTTCACTCGGGGCCTTTCTGTCCGCGAGATTCTCGCAGAGCTCACAGGGCGAAGAGGAGGTTGTGCGAAGGGGAAAGGAGGATCGATGCACATGTATGCCAAGAACTTCTACGGGGGCAATGGCATCGTCGGCGCTCAGGTGCCCCTGGGAGCCGGGATTGCCCTGGCCTGTAAGTATAACGGAAAAGATGAGGTCTGTTTGACTTTGTATGGTGATGGCGCTGCTAATCAGGGTCAGATATTCGAAGCTTACAATATGGCAGCTTTGTGGAAATTACCTTGCATTTTCATCTGTGAGAATAACCGCTACGGAATGGGAACATCGGTTGAGAGAGCCGCAGCCAGCACCGATTACTACAAGAGAGGCGACTTTATTCCTGGACTGAGGGTAGATGGAATGGATATCCTGTGTGTCCGAGAGGCAACAAGGTTTGCAGCTGCCTACTGTAGATCCGGGAAGGGCCCCATCCTGATGGAGCTGCAGACTTACCGTTACCATGGACACAGTATGAGCGATCCCGGAGTCAGTTACCGCACCCGAGAAGAGATTCAAGAAGTGAGAAGTAAGAGTGACCCCATCATGCTTCTCAAGGATAGGATGGTGAACAGCAACCTTGCCAGTGTTGAAGAATTAAAGGAAATCGACGTGGAAGTGAGGAAGGAGATTGAGGACGCTGCCCAGTTTGCCACGGCGGACCCGGAGCCACCGCTGGAGGAACTCGGCCACCACATCTACAGCAGCAACCCTCCTTTTGAAGTTCGCGGTGCCAATCAGTGGATCAAGTTTAAGTCAGTCAGTTAACGAGAGACCAAGCAACCGCACAGAACCCCGTTCCCAGTGAGACTAAAGGGCATGTAGGTGAAAGGAAAGGGAGAGTACTTGCATGCAGTTTATACATTGATGTGAAGATAGGGCAGTATAGAGATTAACCTTTCCCTAAATTTTAGCTTTGTACTTGGAACAGCACCTCCTTGTACGCTACCATTTGAAGGGTAAGAGCTCCTTGCCTGCCCTGAGGGGCCGGTGCTGCGTTCCCCACGTGACCCAGCCTCTTCACCATGACTCTCCCTAAGGAGAGTATTACAGCTGGCAGGAAGACAATTCTTTATAATTATTTCAAAAGCCAAGTGATGAATTTTATTAATAGTTATGGACGTATTACCCTCGTTACTACATAAAATCCAGAGCAGCCCTTCTCCCAGCCTCTTGTGTCCTTGGCAACAAGTGCTGTAGTGTGGAGGGAGCCCTCTCCCACCCCTGGAGGCCAGTTTGTATTTCTCTCTCTGAAAGCTGTCAAAACTAAGGTGCATCGTTCTCCTAATCTTAAAAACAGGTTTATGCAACAACATTTGAGGACAGTTTTTACACAGCCAGGGTTAATTGAACAAGAGCATTTATGTGTAAACGGAACAAAATTGTGGGGACATTCACAGTCACTTTAACGACAACGATGCATGGAGGGGATTTGCTCACTCTGTCGCCGTCAGCCTACTTGCTGGCCGCCGAGGACTGCTGGGGCTGTCTTCTGTACTGGGAGACGGCATTCCAGAGCCTGCAGAGCAGCCCGCCCCTAGGAAGGCAATGGGAGAGGCAGGCAGTGAGAGGCGGAAGTGTCTTCAAACAGTTTGTGGAAAAACAATGTGGGTCGGGCTCATGCAGATGCCGGCTTAGAGGCTTGCAGTTCCTGCAGATGCCGGCTTAGAGGCTTGCAGTTCCTGGCTGCCCAGCCCCAGCTGTTGTGGGCATCTGACAAGCCAATTACTGCCTTTCAAGGTTTTAAGTGCTAAAGGAAAAGTTGCAAGAGCTACACCTCATTCATACCATGTATTTTCCATACATGTGGCTTTCAAGTTTTTTGTATTTTTTTTTTTTTAAGATGGCAGAGCACGGCTCACTCTCCAAGTGCCTGCAGTAGCTGGGGCAGGGCTGGTCGGGGCAGGGGCAGGGGCCCAAGCACGTAAGTTGGCATCTGCTGCGTCATCAGGAAGCTGACTTGCACTCCCCTGTGGATGTCCACATCACCAAGAAGTAGCTTAACCTGCTGCGGGCCAGGGCTGGCCCTTATACCATTAATTCCGTTTTCCACAAACTCTTTGACAAATATTCTCTGCATGTTTGCAGGTGGCCCCCGGCGGCAGGAGGAAGTGGTGCAGAGGGAGATAGCATGCTGGCACCTCAGCAAGGGGGTGGGTGGCAGGAGGCTGAACTGTGTACCTTCCTGCTTCAGACTTTGCCCCTCAGGTTCAGCCACAGCTTGACAAGCCTGGCAAAATGCCTGACTCGGGGGGGGGGGGGGGGGGAGGTGGAGAAGCTCGTCTTCGGACCAAGCTACAGCAAAGGGAATTAATGTAGACAGTTATCAGCACGCTTTCTGCTACGCCCAGGTATGTTCACACGGAGAAGGTAACGGGTTCTCGCACAGAGCGCTCTGAGGCTCTTACCGTAGGCGCAGATAGCTGAGATCCTCGTTGGTGACATCCTGCGGCACGGCGGAAAGTGTGTAGCCCTCTTCCACAATCTGAAACAGAGGCGTGGGCGGTAAGGCAGAGGTGCGCGGCGGCCCCGCAGCAGCAGGCGCTTGCGAGCCGAACGTACCTTGGCGATGGCATCTGCATCCTGCAGGTGCAGCCAGCCCAGGAGCTCCTGATCTGCTCTCTGCCCAGGGGAGGGCCCGGGGCGCTCGGTATTACCTGTAAGGATTCGGAATGCGTTGCACATGAATGTCTCGTCACAAAACTCCCAAAGCAGCAAGCCAGATGTAATAAACTCTGCCAGACTGCA |
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