Retrocopy Name | PDHA1P1 |
|
Species | Equus caballus | |
Coordinates | chr3:43809788-43810968 UCSC | |
Strand | - | |
Parental Sequence | XM_001492157.6 | |
Parental seq. overlap | 1020 bp | |
Parental seq. overlap (%) | 56.1% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | PDHA1P1, located on chr3:43809788-43810968, is a retrocopy of the parental gene PDHA1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | PDHA1 |
Full Name | pyruvate dehydrogenase E1 subunit alpha 1 |
Also known as | - |
Coordinate | chrX:15126210-15141198 |
Strand | + |
Gene summary | N/A |
>PDHA1P1 |
CTCCATGAAGAAGATGCTCGCTGCCGCCGTCTCCCGCGTGTTGGGAGGAGGGGCCCAGAAGCCCGCTAGCAGAGTGCTGGTGGCGTCCTGTAACTATTCAAATGATGCCACATTTGAAATTAAGAAATGTGATCTTCATCGGTTGGAAGAGGGTCCGCCTGTCACAGCAGTGCTCACCCGGGAGGATGGGCTCCAGTACTACAGGATGATGCAGACTGTTCGCCGAATGGAATTGAAGGCAGATCAGCTGTATAAACAGAAATTTATTCGTGGTTTCTGCCACTTGTGTGATGGTCAGGAAGCTTGTTATGTGGGCCTTAAGGCCGGGGCAAATCCCTCCGATCACGCGATCACAGCCTATCGGGCTCACGGCTTATGCTACGCTTACGGACTTTCTGTGCAATCAATTCTTGCAGAGCTGACTGGACGAAGAGGAGGTTGTGCTAAAGGAAAAGGAGGATCGATGCATATGTACGGCAGGAACTTCTATGGGGGCAACGGCATTGTTGGTGCTCAGGTACCCCTGGGAGCTGGTGTTGCTCTGGCCTGTAAATATAAGGGAAGCAATGAGGTCTGTTTGACTCTGTATGGGGATGGTGCTGCTAATCAGGGTCAGATATTTGAAGCTTATAATATGGCAGCTTTGTGGAAATTACCTTGTATTTTCATCTGTGAGAATAATCGCTATGGAATGGGAACAGCTATTGAGAGAGCATCAGCCAGCACTGACTACTACAAGAGAGTTAATTTTATCCCTGGACTAAGGGTAGATGGAATGGATGTCCTATGTGTTCGAGAGGCAGCTAAGTTTGCAGCTGACTACTGTAGATCTGGAAAGGGACCCATAGTGATGGAGCTGCAGACATACCGTTATCATGGGCATAGTATGAGTGATCCTGGAATCAGTTATCGTACCAGAGAGGAAATTCAGAACATAAGAAGTAAGAGTGATCCCATTATGCTTCTCAAAGATAAAATGTTGAACAACAAGCTTTCCAGTATTGAAGAATTGAAAGAAATTGATGTTGGAGTGAGGAAAGAAATTGATGATGCAGCCCAGTTTGCTACAACTGATCCAGAGCCACCACTGGAAGAATTAGGCCATCATGTCTACAACAATAATCTACCTTTTGAAGTTCGTGGTACAAATCAGTGGATCAAGTTTAAGTCCATCAGTTAAA |
>XM_001492157.6 |
TCTCCGTCGCGCCGCGCCGAGGTTAAGGCGTGGCGTCCGCTCCGGGCGCCTGAAGGAGACTTGGAGAGGCCTGGGTAGCAACTTTTAGGTCGGTGGGAATTGCAGCTGCCGTCCCTGCCCGCGCTCCATGAGGAAGATGCTCGCCGCCGTTTCCCGTGTGTTGTCGGGCGTCGCCCAGAAGCCGGCAAGCAGAGTGCTGGTGGCCTCCCGTAGTTTTGCAAACGATGCTACGTTTGAAATTAAGaaatgtgatctacaccggctggaagagggccctcctgtcacgacagtgctcaccagggaggacgggctcagatactacaggatgatgCAGACTGTCCGCCGAATGGAGTTAAAGGCAGATCAGCTGTATAAACAGAAAATTATTCGTGGTTTCTGTCACTTGTGTGATGGTCAGGAAGCTTGTTGTGTGGGCCTGGAGGCCGGCATCAACCCCACAGACCATCTTATCACAGCCTATCGGGCTCACGGCTTTACCTTTACTCGTGGGCTGTCTGTCCGAGAAATTCTCGCCGAGCTTACAGGACGAAGAGGAGGTTGTGCTAAAGGAAAAGGAGGATCGATGCATATGTATGCCAAGAACTTCTACGGGGGCAATGGCATTGTCGGAGCTCAGGTGCCCCTGGGAGCTGGGATTGCTCTGGCCTGTAAGTATTTTGGAAAAGATGAGGTCTGTTTGACTTTATATGGCGATGGTGCTGCTAATCAGGGTCAGATATTCGAAGCTTACAATATGGCGGCTTTGTGGAAATTGCCTTGTATTTTCATCTGTGAAAATAACCGCTATGGAATGGGAACTTCTGTTGAGAGAGCAGCAGCCAGCACTGATTATTACAAGAGAGGTGACTTCATCCCTGGGCTGAGGGTAGATGGAATGGATATCCTGTGTGTCCGGGAGGCGACAAGGTTTGCAGCTGCCTATTGTAGATCTGGAAAGGGGCCCATACTGATGGAGCTGCAGACTTACCGTTACCATGGACACAGCATGAGTGATCCTGGAGTCAGTTATCGTACACGAGAAGAAATTCAGGAAGTAAGAAGTAAGAGTGACCCTATCATGCTTCTCAAGGATAGAATGGTGAACAGCAACCTTGCCAGTGTTGAAGAATTAAAGGAAATTGATGTTGAAGTGAGGAAAGAAATTGAGGATGCCGCCCAGTTTGCCACAGCTGATCCTGAACCACCTTTGGAAGAACTAGGCCATCACATCTACAGCAGTGATCCGCCTTTTGAAGTTCGCGGTGCAAATCAGTGGATCAAGTTTAAGTCCATCAGTTAATGGGTGTCTGCACGTAATGGATGGTTACACCTTCAGTGGGCTGTTCGGCAGCAACTGTAAGGAACTCTTTGTGTTCTCAACTTTGTTCTTGTAAACTTTAAGACTAAATAGTGTGTAGATTGAGATAGTAATTGCATGCAGTGTTGTACAGTGTTGCATTAAAAGAGGTTATTGCACACTTAAGTATTTTATAAAGGTTATTTTAGATTTATATAGGCCCAAAAAAGGAACTACAGAGTTTGTTTAGCCTTACCACAAATTATTTCCTTAAAATAGTTCTATTTGATTTAGTTGTATACTATTTTAACAAATATTCTTTAGTTATACAATTCCTCGTATGCCTGTCCAACACCTTTTGGGGGGGGGGGGTCGTGCCCCTGTCCCTCGCAGTGGCATACTTGCATTACCCAACAGCTAACAGTGTACCCATTAGTGTGCATGTTGGTGCTGGAGCCTGTTCACACTGACCATTGTTTCTCCTTAATAAAACAATATTTATTATAATGAGA |
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