| Retrocopy Name | TATDN2P1 |
|
| Species | Sus scrofa | |
| Coordinates | chrX:39544920-39545727 UCSC | |
| Strand | + | |
| Parental Sequence | XM_003132363.6 | |
| Parental seq. overlap | 674 bp | |
| Parental seq. overlap (%) | 13.8% | |
| Genomic Region |
Intragenic (EFHC2) |
|
| Retrocopy Summary | TATDN2P1, located on chrX:39544920-39545727, is a retrocopy of the parental gene TATDN2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | TATDN2 |
| Full Name | TatD DNase domain containing 2 |
| Also known as | - |
| Coordinate | chr13:66421472-66441978 |
| Strand | + |
| Gene summary | N/A |
| >TATDN2P1 |
| AAGGGTTTCATTGATACCCACTGTCACCTCGACATGCTCTATTCCAAGCTGTCTTTCAAAGGAACGTTTAACAAGTTCAGAAAAATCTACAGCCGCTCCTTCCCTAAGGAGTTTCATGGCTGCATCTCCGATTTCTGTGATCCTCGCACGCTAAAGGATGGCCTATGGGAGGAGCTGCTGAAAGAGGATCTGGTTTGGGGGGCCTTTGGCTGCCACCCCCATTTTGCACGTTACTATAATGAGAGCCAAGAAAGAAGTATTTTGCAAGCCTTACGCCACCCCAAGGCTGTAGCATTCGGAGAAATTGGCCTGGATTACTCCTACAAGTGCACCACACCTGTCCCACAGCAGCACAAGATATTTGAGAGACAGCTGCAGCTGGCCGTGTCTCTAAACAAGCCCATGGTGATCCACTGCCGAGAAGCTGACAGAGATCTGCTGGGCATCTTGAAAAAATTTGTGCCCTCCGACTTCAAGATCCATCGGCACTGCTTCACTGGCAGTTACTCAGTCATCCAGCCCCTTCTGGAGTACTTCCCCAACATGTCTGTGGGCTTCACAGCAGTCCTGACTTACAGTTCCGCCTGGGAGGCCCGAGATGCTCTGAAGAAGATCCCGCTGGAGAGAGTCATCGTGGAAACAGATTCTCCCTACTTCCTCCCTCGGGGGGTTCCCAAAAGCCTCTGCCAGTTTGCCCACCCCGGCCTGGCCCTGCACACCGTTCGAGAGATTGCCAGAATCAAAGATCAGCCACTCTCCCACACCTTGGCCACCTTACGAGACAACACGAGTCGTCTCTACAGCCTTT |
| >XM_003132363.6 |
| CAAGACCCGCCCCCGTCGCACGCCGGAGCTGCGAGCCGTAGGGCTCGTTCCGGGAGGCGGACGCAGCGAAGGCTAGTGTGGTCCGAGCTCCGGAGAAGCAAGGCCAGCCCCGCGGGGCTAAGGCTGTCAGCGAGCAGGCGGCCGGTGCGAAACCTCAGGGCCGTGGGGGGGGGGTGCGGGGTCGACGTCTGGGCCGCTGCAGCAGGGACCAAAGGCGGGGCGGGGCGGGCCCAGGGGCGCCCTAAGCAGGCGGACTGGTACGCCGCCGGCTTCTGAAGGGCGGCTCAACCCCTTGCGGCCCGGGGCTGGTCGGCGGGGCCGCGGGGGCAGGGCGGACTGCACGCCGGGTCCCGCCCTGCTCTGCGGCCCGTGCTCGGCGTTCCGGGCCTCCGGGCCGCGCGCCCGACTAGGGACTGCGGGTCTGGCCTCCAGGTGTGGATCTAACAGCTCCCTGTGGCCTTTCGGAGAGCTCTGACACCTTTGAAAGGCTTTGTATCGCCAGCTCCATCGTAGTCCCGGAAACGCTTTGACATCTGCAAAGTAGCTCTGTGCAAACTGAAGCGCTTGGTAATCGCGGAAGCACGTTGTGGGCTTGGAAACCGAATCGAACGAAGCCTTTGGTAAATCCTGGGATCATTTGGAATTCTCTGAAGCGCTTTGGAATCGCACACATTCGAAGCGCTTTGGCATCTCTGAAGCCTTGAACTGTGATGGGCAGTGGAAAGAAGGGGGAAAGGTGCCCATGGCGTCGGAGCGGCGCAAGGTCAAGTACCACTGGAGCAGCACTTCGGAGCGGAGTTCCCGCAAGCGCAGCTGCCTCCGGGAGCCCAGTGATGTGGCCCCCTCCAGCCGGCCAACTCACAGCTCTGCAGCGCGTTCTGGAGGGGCCAGCAGCCCCAAGCGCCTGAAAGCCCAGAAGGAGGAAGATGTGGCCTGCTCGCCGAGGTTGTCCTGGGGCTCATCCCGCCGCAGAAGTTTCTCTTCTTCCTCCTCCCATTCCTCTGGCCCAGGTGTGGGTGGGGCCGCCTCCAAGGGAGGCCTGATTCGGAGCTCACAGGGGTTCCTTTCGTCAGGGGACTCCCCTGGCAAACCCTCTCTAGAAGAAATGGCTTCTCTAGAGGAGGAAACCTGCAGCCTTAAGGTTGATTCCAAAGATAGTTCTCGTAACTCCGTGGACTCTGAATTTGCAGCTGAAGCTGAGAGTCAAAATGATACAATGGAGAAATCAAACAAGGTCCAGAAAAGGAAGAGGGATAGACCTCAAGACCAAGGCTCTACGATGATCTACCTGAAGGCCATCCAGGGCATCCTGGGCACGTCGATGCCAAAAAGGAAGGGAGAGGCTGCCGCTCGGTCCAAAGCCAAAGCGGCGGAGCGTCCCAGCCGCCCAGAGGGACCAGCCACGAGTATCACCGTGTCTGCTCCTCAGAAAGAGAAAGAGTCCACCCCAGAGGGCAGAGTGGAAGAGGAGAAGGCTGAGGAGAAGAGCGGCTTCTGCAACAGGAGAGTGGTGATAGACCCTCAGGAGAAGCCCGAGGAGGAGCCCCTAGGTGACCGAAGGATGGTCATTGACAAGCGCTCTCCACCCCTGAAGTTTGTGGATGACTCTGACTCCCATTTGAACAGCCAAAAGCCTAAAGAAAGAGAGGTGGTAATAGAGCGTTCCTCTTCCGGAAGTGACTGGTCTGATGTGGATGAGATTTCCACGGTCAGATTCTCTCAGGAGGAGCCCGTGTCTCTGCACCTCTCCGCAGCTCCAGAGCCTTCTGCCTTCCCCACCGACTACGTCATGTACCCAGCTCACTTGTACAGTAGTCCCTGGTGTGACTACGCCAGCTACTGGACCAGCAGTCCCAAGACCCCCAGCTACCCCTCTGTGggcggtggcggtggcagtggtggcagcagtgacacggcgcaggcggggaggaggggcgggggCTCTTCCCCCCGCTCTACGGTGAGCCCCCCGAACACCTCCAGGGGGCCAGAGGCCGCCGAGGAAGGCAGATCCCGGAAATCTCGCTCACTGCGTTTCTCCAGAAGCTCGGAAGACGTGAAGGAGAAAAGAACATTCCAGGAGGATGCTCCCCCACGTCCGTGTGGAGGACATGCATCTAGCTCCCTGCCCAGGAGCCGTCGGGAGCCCAGGCTAGAGGGTTTCATTGACACCCATTGTCACTTGGACATGCTTTATTCCAAGTTGGCCTTCAAAGGGACCTTCACAAAGTTTCGGAAGATTTATAGCAGCTCCTTCCCTAAGGAGTTTCAGGGCTGCATCTCTGACTTCTGTGATCCTCGGACACTGACAGATTGCCTCTGGGAGGATCTGTTGAAAGAGGATCTGGTGTGGGGAGCCTTCGGCTGTCACCCCCACTTCGCACGTTACTACAACGAGAGTCAAGAAAGAAAGCTTCTGCAAGCCTTAAGGCACCCCAAGGCTGTGGCATTTGGGGAGATGGGCTTGGATTACTCTCACAAGTGCACCACGTCCGTCCCAGAGCAGCACAAGGTATTTGAGCGGCAGCTGCAGCTGGCTGTGGCTCTAAGGAAGCCCTTGGTGATCCACTGCCGAGATGCTGATGAAGATCTGCTGAAAATCATGAGAAAATTTGTGCCTCCAGACTACAAGATTCACAGGCATTGCTTCACTGGCAGCTACCCGGTCATTGAGCCCCTGTTGAAGTATTTTCCCAACATGTCCGTGGGCTTCACAGCAGTCCTGACCTACTCCTCTGCCTGGGAGGCCCGGGAAGCTCTGAAGCAGATCCCGCTGGAGAGGATCATCGTGGAAACGGATGCTCCTTACTTCCTGCCTCGACAGGTTCCCAAGAGCCTTTGCCAGTATGCCCACCCGGGCCTGGCCTTGCACACAGTTCGAGAGATTGCCAGGGTCAAAGACCTGCCGCTCGCCAGCACCTTGGTCACCCTGCGTGAGAACACCTGTCGCCTCTACAGTCTTTGAACAGAGAGCGTGCCATCAGGAGTCTCCCAGAAAAGGACAACCAGTGGCCTGATAGGACAAAGGCCATGGGAACTCTGCTGGTGCCACTTGAGGATGTTGGGGAGCCCATTGGGATGGAGGAGGCCTGGACAGAGTGTTGCCTGAGACAGCGTTGGAGGCTTCTGCTCTCAgcggtgggcggtgggtgggtggtgtgggcgaggggttgggggcCAGTATCCTGGCCCTGGGGCTTGGGGCGGCCAGTGAAGAAGAGAGAGGCTGATGTAAGGGCACAACGAGCTTGCCAACCCAGTCCTCTGCAGCTTGTGGTCTTAAGCAGTCTGTGAATAAAGTCACACTCCTCTTCAGCTAAAGCGCATGTGAGCGTGTAACTTGGTTCCTGGTTCTGCACTCTGAAAACGACCTCCCAAGTGGGAAAGCTCTGGGGACGTTTGCAGGAGACCTACCTGTCTCAGAGGCTTTTGCTCCCGCAGCTGGCAAGAGCCGCTGGCCCTTCCCCGCATCCCTCCTCCATCTGGCTCTCACTGCTGCCGTGTCGGCTCTGCGTCTGCAGAGGCAGAAGGACCTCGGCTGCCGGTCTCACTGGTTCTACTGACGTCGATGTGGAGGGGGCCAAGGGGCGCTCGTTGTCCAGGGCAAGGCCTGGCCAGGGGAGATTGGACAGACTGGGGGACTTGAGGAAGTCCTTCTTGAGGAAGAAGACCCCAGGGAAGGTGTTCCCAGTTACAGATGCCCCCAGGGCTGCAGTTCAGTTGCGTTAAACTGATGAGGGTCAAGTTTGTAGCAGAAGCCATCTGCTATCGGGGTCCCAGCTGCCCTTTGCTCCACTGTGCCCCCTTCTCCTGGAACCCTGGACCAAAAATACTCTGGTTTCATCTCATGTAACAGCCCCTTGTGTGCCCCACCCAGGTGGGGAGGTAAACTGCCTCCAAACCCCTGCCGGTGCCGCCTCGCCCTGTCGCTCTGTGCAGAACAAGCGTCTCCCATCCCTCTCTGAGGTTCTCCCTTGCCTTTGCCTCCACGATGCCCTGTCTCCCTGGTGGCAGTGAGAGCCCCTCCTTGGACTTTGGAGCAGCCAGTTCATCTCAAGTTCTGAGCTGTGCTCTGCTCCTTGCTGGTGCCTTGTGAAGGTCTATTCATTACAGGCCCTGGAAGGTTACAATGGTCAAGGCTTAAGTGTGAGGACCCTCTGCACTTTGGACAAAAGGATCCTTTATTCCAATCTTCCTCAGGGAGACAGGCCACCCTTAGTCCCTTGTCTGTTTTTTGGAGGCCAGTGGCTTAAATCATAAAATCCATCACTTAGGCTGGATTCCTTTAGGTGAATTTGGAAGATATTTTTGAGCCTTGGAAGCTGCAAGGAAATGGACTTGGCAGTTCCTGTCTGGTATTTCCCTCTTGCCCTGGTACCCGAGTTGCTGGCCTGAGAAGTGGGATTGCTCTCGACCATTCGTGGATCAGCTGTGCAGCATCTGTGCCTCAGATTTGGGGAGTCCAGGGCCTTGTTCTCCTGCCTGGAAGATTTGGAGGACTAGGTATTTCAGAGTGCTTTACTGTCACCCAGATGAACTGCAGGCTCTCCATCTCCTGCACAGCAAGGCCTGTATGTCACAACTGCCTACACAAGAAACCAACCTGGTCCAAGGATTAAGAGCGGTTAACTCAGTGGACGTCTCTGAGCCATTGCAGTCTCCCTGCCAAGGTAAAGCACAAGGTGCTACATACTTTTATCTCTAGGATTTAGGATTATCATTTCTGTTACACAGTGAAACATGACCTGTGTGGGCGTGAAAGCTGGTTGGCATTGTTTTTAATTTAGTTTCTGAATGGCTGACTTGATTGTGCTGTGTTGGCAGAATGCCTCTGTACCTCTGCCCCCTCGCCCCCTTTGGCGAAAATAAAGTGACGGATCTTCAGCCAGC |
| PMID - Link | Title |
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