| Retrocopy Name | RPS3P5 |
|
| Species | Sus scrofa | |
| Coordinates | chr17:41564287-41564754 UCSC | |
| Strand | + | |
| Parental Sequence | NM_001044601.1 | |
| Parental seq. overlap | 385 bp | |
| Parental seq. overlap (%) | 47.1% | |
| Genomic Region |
Intragenic (RALGAPB) |
|
| Retrocopy Summary | RPS3P5, located on chr17:41564287-41564754, is a retrocopy of the parental gene RPS3. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | RPS3 |
| Full Name | ribosomal protein S3 |
| Also known as | - |
| Coordinate | chr9:9612939-9630404 |
| Strand | + |
| Gene summary | N/A |
| Species | Scientific Name | Retrocopy | |
 |
Human | Homo sapiens | RPS3P2 |
 |
Chimpanzee | Pan troglodytes | RPS3P8 |
 |
Bonobo | Pan paniscus | RPS3P8 |
 |
Gorilla | Gorilla gorilla | RPS3P9 |
 |
Orangutan | Pongo abelii | RPS3P7 |
 |
Gibbon | Nomascus leucogenys | RPS3P8 |
 |
Green monkey | Chlorocebus sabaeus | RPS3P1 |
 |
Crab-eating macaque | Macaca fascicularis | RPS3P6 |
 |
Rhesus | Macaca mulatta | RPS3P6 |
 |
Baboon | Papio anubis | RPS3P8 |
 |
Golden snub-nosed monkey | Rhinopithecus roxellana | RPS3P8 |
 |
Marmoset | Callithrix jacchus | RPS3P7 |
 |
Mouse lemur | Microcebus murinus | RPS3P6 |
 |
Dolphin | Tursiops truncatus | RPS3P6 |
 |
Horse | Equus caballus | RPS3P5 |
 |
Pale spear-nosed bat | Phyllostomus discolor | RPS3P3 |
 |
Velvety free-tailed bat | Molossus molossus | RPS3P4 |
 |
Greater horseshoe bat | Rhinolophus ferrumequinum | RPS3P4 |
 |
Mouse | Mus musculus | Without Homology |
 |
Rat | Rattus norvegicus | Without Homology |
 |
Chinese hamster | Cricetulus griseus | Without Homology |
 |
Rabbit | Oryctolagus cuniculus | Without Homology |
 |
Cow | Bos taurus | Without Homology |
 |
Sheep | Ovis aries | Without Homology |
 |
Dog | Canis familiaris | Without Homology |
 |
Panda | Ailuropoda melanoleuca | Without Homology |
 |
Cat | Felis catus | Without Homology |
 |
Greater mouse-eared bat | Myotis myotis | Without Homology |
 |
Kuhl's pipistrelle | Pipistrellus kuhlii | Without Homology |
 |
Egyptian rousette | Rousettus aegyptiacus | Without Homology |
 |
Sloth | Choloepus didactylus | Without Homology |
 |
Tasmanian Devil | Sarcophilus harrisii | Without Homology |
 |
Opossum | Monodelphis domestica | Without Homology |
 |
Platypus | Ornithorhynchus anatinus | Without Homology |
 |
Chicken | Gallus gallus | Without Homology |
 |
Turkey | Meleagris gallopavo | Without Homology |
 |
Zebra Finch | Taeniopygia guttata | Without Homology |
 |
Budgerigar | Melopsittacus undulatus | Without Homology |
 |
Painted Turtle | Chrysemys picta | Without Homology |
 |
Lizard | Anolis Carolinensis | Without Homology |
 |
Frog | Xenopus tropicalis | Without Homology |
 |
Zebrafish | Danio rerio | Without Homology |
 |
Drosophila | Drosophila melanogaster | Without Homology |
| >RPS3P5 |
| TACCAACCAGGACAGAAATCATTACCTTGGCCTCCAGGATGCAGACAGAATGTCCTTGGTGAGAAGAACCTGTGGATCCTGGAATTGACCAACGTAGTTCAGAAGAAGTTTGGCTTCCCTGAAGGCTGTGTAGAGCTTTTCCTGGAAAGGTGGCTGCCAGAGGTCTGTGTGCCTTTGTCCAGATGGAGTCTCTGCATTGCAAACTCCTAGGAGGGCTTGCTAGGCAGAGCCCTACTATGGGATGCTGCAGTTCATCATGGAGAGTGGGGCCAAGGGCTACAGGATCATGGGTGTCAGGGAAACTCCAAGGACAGAGGGCCAAATCCATGAAGTTTCTGGATGGTGTGATGATCCACAGTGAGGATCCTGTTAACTACTACATTGATACCGTCATGTGCCACATACTACTCAGATATGCTGTGCTGGGCATCACAGTGAAGATCATGCTGTCCTGGACCCAAGTGGTAA |
| >NM_001044601.1 |
| CAAGATGGCGGTGCAGATTTCCAAGAAGAGGAAGTTTGTCGCTGATGGCATCTTCAAAGCTGAACTGAATGAATTTCTTACTCGGGAGCTGGCTGAAGATGGGTACTCCGGAGTTGAAGTTCGAGTTACACCAACTAGGACAGAAATCATTATCTTGGCCACCAGGACACAGAATGTTCTTGGTGAGAAGGGCCGGAGGATCCGGGAATTGACTGCTGTGGTTCAGAAGAGATTTGGCTTCCCTGAGGGCAGTGTAGAGCTTTATGCAGAAAAAGTGGCCACAAGAGGTCTGTGTGCCATTGCCCAGGCAGAGTCTCTGCGATACAAACTCCTCGGGGGCCTTGCTGTGCGGAGGGCCTGCTATGGTGTGCTGCGGTTCATCATGGAGAGTGGGGCCAAAGGCTGCGAGGTCGTGGTGTCTGGGAAACTTCGAGGACAGAGAGCTAAATCCATGAAGTTTGTGGATGGCTTGATGATCCACAGTGGGGACCCTGTTAACTACTACGTTGACACCGCCGTGCGCCATGTGCTGCTCAGACAGGGTGTGCTGGGGATCAAGGTAAAGATCATGCTGCCTTGGGACCCAACTGGTAAAATTGGCCCTAAGAAGCCGCTGCCTGACCACGTGAGCATTGTGGAACCCAAAGATGAAATACTGCCCACCACCCCCATCTCCGAACAGAAGGGTGGGAAGCCAGAGCCACCCGCCATGCCCCAGCCAGTACCCACAGCATAATAGGGTCTCCTTGGCAGCTGGATCTGGAGTCTGGATGTTGTTCTGTAAAGACATTTAATAAAATCTTTTCAAAAG |
| PMID - Link | Title |
|---|