| Retrocopy Name | Mkrn1P1 |
|
| Species | Rattus norvegicus | |
| Coordinates | chr1:123063128-123063501 UCSC | |
| Strand | - | |
| Parental Sequence | XM_006236302.3 | |
| Parental seq. overlap | 292 bp | |
| Parental seq. overlap (%) | 9.9% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Mkrn1P1, located on chr1:123063128-123063501, is a retrocopy of the parental gene Mkrn1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Mkrn1 |
| Full Name | makorin ring finger protein 1 |
| Also known as | - |
| Coordinate | chr4:67185167-67206478 |
| Strand | - |
| Gene summary | Predicted to enable chromatin binding activity and ubiquitin protein ligase activity. Predicted to be involved in protein polyubiquitination. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Orthologous to several human genes including MKRN1 (makorin ring finger protein 1). [provided by Alliance of Genome Resources, Apr 2022] |
| >Mkrn1P1 |
| ATGGAACTCTCTTTTGCTGTGCAGCGCAGCATGGACAAAGTGTGTGGCATCTGCATGGAGGTTGTCTATGAGAAGGCCGACCCCAGCGACCGCCGCTTTGGCATCCTTTTCAGCTGCAACCACACCTACTGTCTTAAGTGTATCCGCAGGTGGAGAAGTGCCACACAGTTTGAGAACAGGATCAGTAAGTCCTGCCCACAGTGCAGGGTCTCCTCTGGCTTTGTCATTCCTAGTGAGTTCTGgAAACTTGTTCAGCAATATAAGGAGGGGATGAGCCAGAAAGCCTGCAGGTATTTTGCTGGAGGCCTAGGTCACTGCCCATTTGGAGAATTCTGTTTTTACAAGCATGA |
| >XM_006236302.3 |
| AGGAGGGCCGCGGGCGCCCAGCGGAGCCTGCAGTTCCCGAGACCAGAGCGCTCCGAGACGCGGTGACACGGCACGGGACTGGCGTGGAGCTCTCGGGCTCTTCAGCCTCCCTCCCCTCCCCTCCCTTCGCTGTCTTCTCCTTCTTAGCCGGACCGGAACTATGTGATCCCGGAAGTTCCGGGGCCATTGCTGTGTGGGATAAACAGTAATGGCGGAGGCTGCGGCTCCCGGAACAACAGCCACAACATCAGGAGCAGGAGCGGCAGCGGCGGCGGTGGCAGCGGCCTCCCTCACCTCTATCCCCACAGTCGCTGCCCCGTCCCcgggggcgggaggagggggcggcggcagcgacggcagcggcggcggcTGGACGAAACAGGTCACCTGCAGATACGAACACAGCAAGCCACTGAAACAGGAAGAAGTGACTGCTACAGACCTGAGTGCAAAGCCATCCCCTGCTGCTTCCTCAAGTCTCCCTTCTGGTGTTGGATCACTTGCTGAAATGAATCCAGGCGAAGCTGAGTCACGAAACCCAAACTTTCCAACTGTAGGAGCGGGTTCAGAGGACTGGGTGAATGCCATTGAGTTTGTCCCTGGGCAGCCCTACTGTGGCCGTACTGCCCCTTCCTGCACTGAAGTGCCCCTGCAGGGCTCAGTGACCAAGGAAGAGTCAGAGAAGGAGCCAACTACGGTGGAGACAGAGAAGCAGCTTTGCCCCTATGCTGCAGTGGGAGAGTGTCGCTATGGGGAAAACTGTGTGTATCTCCACGGAGACTCCTGTGACATGTGTGGCCTGCAGGTCCTACACCCAATGGATGCTGCCCAGAGGTCACAGCACATAAAATCGTGCATTGAGGCCCATGAGAAGGACATGGAGCTCTCTTTTGCTGTTCAGCGCAGCAAGGACATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACCCCAGCGAGCGTCGTTTTGGGATCCTCTCCAACTGCAACCACACCTACTGTCTCAAGTGTATTCGCAAGTGGAGAAGTGCTAAACAATTTGAGAGCAAGATCATAAAGTCCTGCCCCGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGTACTGGGTGGAAGAGAAAGAAGAGAAGCAGAAACTCATTCAGAAATACAAGGAGGCCATGAGCAACAAGGCGTGCAGGTATTTTGATGAAGGACGTGGGAGCTGCCCATTTGGAGGGAACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGAGCCACAGAGACAGAAAGTGGGAACATCAAGCAGATACCGGGCCCAACGAAGGAGCCACTTCTGGGAGCTCATTGAGGAGAGAGAGAACAACCCCTTTGACAACGACGAAGAGGAGGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTGCAGGTGGGGACGACGAGCTGACAGACTCTGAGGACGAGTGGGACTTGTTTCACGATGAGCTGGAGGATTTTTATGACTTGGAGCTATAGCAGCTTTGCGTGGCGCAGGAACTGGTCTGCGGAGCCTCAGACAGTAGCTGTCCCCTGTGCTGTATGGCAGTGCGTGTGGCTCTCCTAGGCAGGCCTCTCAAACTCCAGGTGCTGTGATCACTACCCAGGGCCTGTTCCTCTACCCTCACCTTTCCCCCAAGAGTGTGTTGTTTTCTCTGTTTCAAAAGTTACAAAAATAAATCTTAAAGTTAGTTTTTTTGTAACATGAATTTAACTGTCAGACAGTTAGTGTAGGTTTGTTGCGTCATCTGTTTTTGGCCAGGTTGTGTTCATGGACTTTGCACACTCATTTTGAGACCCCTTTGAGGTTCAAAGGAAAAAGCACTGACTGTGCTTTGGGGTCCAAGGATAGGGGCAATTGGGAAAAAAAAGGGACCTAACTTGGCAAGTCGCTCTCTGCGATAGGTGTAGGAAGGTTCCCCGAGGTTTCTGTGAGACCTGCACTGCACCTTCACAGTTTTATCTATGTTCCCTACCCTGTAATCCCCATCAACATGTGCTTGTGCTGTGGTTTTGGGCTCTTGTTTAATTGCACGCAAGAACTACTACTGGGTAACCAGAACCAGGTGCAAATGTGTTGAGGTTGACATGAGAAAATCTAAAAACATGAAGGATGCGGTGGTGTTCCCTCAGTGCAGAGCTGGCGGTTAACTCCCAAGGGTGGATGGACTTGGTGGGTGAGCATGGGCGCGCACGGGCGAGCATGGGAGCAGCTTCCCATCGGTGCATAGGTGCAGTATTCTTAGCTTTAGTGGGCAGATGTGGGTTAGTGGTTTCAGCCACATGTGTCAGGTAGATCTAAAGGACCAAGCAGTATGTCAGTAGTTGTTAACGTAGCAGTAGCTGTCTGTCTGTATGCTAGAGAAATGGGATCAGCTGTAGAGGTTAAATGACCTACTTGTCCCTTTCAGTACAAGGTGGGTCTTGGACACACTGATGTTTTGAATGTTTTACAGTCTAGCCTTTTCAGTCCAGGCACTTTTTGGAAAAAAACTTTGTCCTCATTTGAGGGGGCCTGTTGTGAGGTTCTGTGCTTGTTTTTGTGGGTATCTGCCTCATTCCATCCCTGCCTGAGCTCTGACAGTAAGACAGGTGGATTCCAAACTGAGGTGTTGATTGTGCTAGAGGTTTGCAGAAGTAATGAACCCCTTTCCCGGTAAAGAGAAGGGAGGGTGTGGCCATCCACAAGACAAGCAAGAGTTGCTAAAATTCCTTGGCGGGAATTTCACCTTTGCATTCTGTTGCTCTTTCCTGAAATAACGTGGGAGATGCTCGGATCTGTCCCTCTGCCCTGCTTACCCGGAACTCACCCAGTCTTTCACTTAAGAAAAACACGTCATCGTTGCAGAGGTCTCTGTTTTGCAGCTGCCCTTTTGTAAGAAGCACTTTTCCCAAATAAAACAATTTTGAAAAAA |
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