Retrocopy Name | TUBA8P1 |
|
Species | Phyllostomus discolor | |
Coordinates | scaffold_m19_p_1:140186410-140186778 UCSC | |
Strand | - | |
Parental Sequence | TUBA8_x5 | |
Parental seq. overlap | 295 bp | |
Parental seq. overlap (%) | 9.2% | |
Genomic Region |
Intragenic (TUBAL3) |
|
Retrocopy Summary | TUBA8P1, located on scaffold_m19_p_1:140186410-140186778, is a retrocopy of the parental gene TUBA8. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | TUBA8 |
Full Name | N/A |
Also known as | NULL |
Coordinate | scaffold_m19_p_12:45819-61020 |
Strand | - |
Gene summary | N/A |
>TUBA8P1 |
AAGTACATGGCCTGCTGTCTACTCTATAGGGGGGATGTGGTTCCCAAGGATGTGAATGCCGCAATTGCAGCCATGAAGTCAAGAAACTCCATTCAGTTTGTAGATTGGTGTCCAACAGGTTTCAAGGTGGGCATCAACAGTCAACCACCCACAGTGATGCCAGGGGGCGAAATGGCCAAGGTCCAGCAGGCTGTCTGCATGCTGAGCAACACCACAGCAGTTGTAGAGGCCTGGGCCCGCCTGGATCACAAGTTTGACCTTATGTATGCCAAGAGGGCATTTCTACATTGGTACATCAAAGAAGGCATGGAAGAAGATGAGTTTTTAGAGGCCAGGGAAGATCTGGCTGCTCTAGAGAAGGATTATGAG |
>TUBA8_x5 |
GTGATGCCCAAGAGCAGCTGCTGGCCCAGCATGTCTGTCCCCAGCCCCCTCCCGCCCAGCGTGTCACAACGGCGGAGGCGGCTGTATCTGGAACAGTTGGGGAGGGCAGGCCCGGCCAGCAGGCGAGCGAGCGACGAGTGCAGCCGAGATGAGGGAGTGCATATCCGTGCACGTGGGCCAGGCGGGGGTGCAGATCGGCAACGCCTGCTGGGAGCTCTTCTGCCTGGAGCACGGCATCCAGGCCGACGGCACCTTCGGGGCCCAGGCCGGCAAGATCGGGGACGACGACTCATTCACCACCTTCTTCAGCGAGACCAGCAACGGGAAGCATGTGCCGCGGGCTGTCATGGTCGACCTGGAGCCCACGGTAGTGGATGAGGTTCGGGCGGGCACCTACCGCCAGCTCTTCCACCCGGAGCAGCTGATCACGGGGAAGGAGGATGCTGCCAACAACTACGCGCGCGGCCACTACACGGTGGGCAAGGAGAGCATCGACCTGCTTCTGGACCGCATCAGGAAGCTGACGCCTGCTCCGGCTTGCAGGGCTTCCTGATCTTCCACAGTTTCGGCGGCGGCACTGGCTCTGGCTTCACGTCTCTGCTGATGGAGCGCCTGTCCCTGGATTACGGCAAGAAGTCCAAGCTGGAGTTCGCCATCTACCCGGCCCCGCaggtctccacggccgtggtggagccctacaactccatcctcaccacccacaccaccctggagcactccgactgcgccttcatggtggacaacgaggccatctacgacatctgccgccgcaacctggacatcgagcgccccacctacaccaacctcaaccgcctcatcagccagatcgtctcctccatcacggcctctctgcgctttgatggggccctcaacgtggacctgaccgagttccagaccaacctggtgccctacccccgcatccacttcccgctggtcacctacgcgcccatcgtctccgccgagaaggcctaccacgagcagctgtccgtggcggagatcaccagctcctgcttcgagcccaacagccagatggtgaagtgcgacccccggcacggcAAGTACATGGCCTGCTGCATGCTCTACCGCGGGGACGTGGTGCCCAAGGACGTGAATGTTGCCATCGCCGCCATCAAGACCAAGAGGACCATCCAGTTTGTGGACTGGTGTCCCACAGGCTTCAAGGTGGGCATCAACTACCAGCCTCCGACGGTGGTGCCCGGAGGGGACCTGGCCAGAGTGCAGCGGGCCGTGTGCATGCTGAGCAACACCACGGCGATCGCAGAGGCCTGGGCCCGCCTGGACCACAAGTTCGACCTCATGTACGCCAAGCGggcctttgtccactggtacgtgggggagggcatggaagaaggagagttctccgaggccCGGGAGGATCTGGCGGCCCTGGAGAAGGATTATGAAGAAGTGGGGACGGATTCGTTTGAAGAAGAAAATGAAGGGGAGGAATTTTAAATACACAGGTTCCTCTTGGCTGAGTCTCTTTGTCTTTGCTGCTCCGTTCCAAGCACCTGTAGCTGTCACAGGTGACGCTCCCAGCTGCAGCCAGATCCCGGTCTGACCCCCGTCCCTGCAGGTGGCTGGGCTGAAAGGGGCACTGTGCTCTGCCCGCCCGCCCTTGGGCAGGAGCAGCTCTGTGTCAACAAAGAAAACGAGAGTCACCATCTCTGGTTTAAGGGGAAGCCAAGTACATGTGCGGAGGCCCGATCGGGACTTTAACTCTAGGTTAGGCTCTGCCCACCCCGAAACACAGCCTGCTGGCCAGGCAAAGGTAAGACCCAGGGAAGGGGAGTATCTAGGCCTTGAGAAGGTCCTGGAACAGACACCTCTTCTGCCCCGTACACACAGCAAGACCCACGCGAGACAACTTCAGGTGGTGTCAAGTGATGTGAAGTGAACAAGCAGTGGTGAGAAGAAGTGCTGGGTTGTCAGGGAAGGCCTCGTGGGGACCCCAGTGGAGAAAGGAGCCATTCTGGGAAGCTTTGGAACCGGGGGTGCTGGGCATGGGGCAAAAACACAGGTGTGGGGACAAGCGTGGGGTGTCTGAGGAGCAGAGGGGGGCCTGTGGGTGGAGGGTGGTGGAGAGGGAGCCGCAGCAGCCAGGCAGGGTCCAAGCAAACTCGGCCTCACAGACCATCCAGAGGAGTTTAGGCTTCTCTCTAGGCAGACACAGAGGCACTGGAAGGTTTGGAGCAGGAAGTGACTATGTATACACACAGACCTTATCGCTAATCCCCCGGCTGTCTGAACACGGGTGTTCTCACTTTACGAGCAAAGAGCCTGAGGTGCTCTTTGGAGACAGTAAGAGGGGTGCCCAGGGGCCGCCAGCCTGGTTTCGAGTCTGCCCTGCACCGTGTCTGTCGGCCGTGGTTGGCCGAGTGCCCGACTGCTGCCTCGGGAAGGGGCGGGTGGGGGCGGGGAGAGACCCGTGTGCCACTGAGAAAGCACAGGACACGTCGTGAGTGCACTCTGCCTGAAGCTGGCAGCTCTGGTAGGGTTTCAGGAGATGTCGAGACTGCTGTGGGTCCCTGTATGTCAAATGTGCCGGTATGCTCATTAATATTCCACTGTGCCTAAACgtttttatttgaatattctttggaagtaggacgaaatggtggactacactgatctttgaatattgaacaagactttgatccctggagtaaaaccatacgtggccggggcatagaattcttctgcatttctgaattctatttgctaatgttttgtgaagaattttgcatctgaattcaggagggatgttggtatacagttttctcttttttgtgctgtgtctgattttggtacccaggcaatgctctcctaagatgaggtgggaagtggcctctcatttcctggaagtgtacatcacggattaatattaactcttaaaacatttggcagagttctactggacctggagatttcatttttgggagttttaaaaATTAATAGTTAagccctggctggtgtgactcaatggattgagtgccggcccgcgaacttaagggtcgctggttcaattccaggtcagggcacaggcctgggttgtgggtcaggttcccagtagggggcgtgtgagaggcgaccacacattgatgtttctcttcctctctttctccctcccttcccctctctctaaaaataaatgaaatcttt |
PMID - Link | Title |
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