Retrocopy Name | LOC100072403P1 |
|
Species | Equus caballus | |
Coordinates | chr29:29660879-29661451 UCSC | |
Strand | + | |
Parental Sequence | XM_023645097.1 | |
Parental seq. overlap | 451 bp | |
Parental seq. overlap (%) | 28% | |
Genomic Region |
Intragenic (TUBAL3) |
|
Retrocopy Summary | LOC100072403P1, located on chr29:29660879-29661451, is a retrocopy of the parental gene LOC100072403. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | LOC100072403 |
Full Name | N/A |
Also known as | TUBA3D |
Coordinate | chr7:35859550-35867159 |
Strand | + |
Gene summary | N/A |
>LOC100072403P1 |
AGGGCCCTTGAATGTGGACCTAATTGAATTCCAGACCAACCTGGTACCTTATCCGAGAATACATTTCCCCATGACCACCTTTGCCCCCATCATCTCTGCTGACAAAGCCTACCACGAGGAGCTCTCCGTGTCAGACATCACTGCGGCTTGCTTTGAGTTCTCCAACCAGCTGGTCAAGTGTGATCCTCGACTGGGGAAGTACATGGCCTGCTGCCTACTCTACAGAGGGGATGTGGTCCCTAAGGATGTGAATGCAGCGATTGCAGCCATGAAGTCAAGGAACTCTGTTCGGTTTGTAGATTGGTGTCCAACTGGTTTCAAGGTAGGCATCAACAATCAACCCCCCGTGGCGATGCCAGGAGGGGACCTGGCCAAGGTCCAGAGGGCTGTCTGCATGCTGAGCAACACCACAGCAATTGTGGAGGCGTGGGCCCGCCTGGACCACAAGTTTGACCTCATGTATGCCAAGAGGGCATTTCTACATTGGTACATCAGAGAAGGCATGGAAGAAGGCGAGTTCTCAGAAGCCAGGGAAGATTTGGCAGCCCTGGAGAAGGATTATGAAGAAGTGGG |
>XM_023645097.1 |
CTGGGGACCAATGGCAGTGAGGCAGCGCAGGCGGCTCTGGGGAGCGCGCGCAGGCGCAGCCGTTGCGGTGGAGGAACGGTTGGGTGGAGGAGCGGTTGAGGTCCAGCAGCAGTTGAGGTCGAGGAGCGGCGTCGGGTGGCAAGGAGCTCACCATGCGCGAGTGCATCTCTATCCACGTGGGGCAGGCAGGGGTCCAGATCGGCAATGCCTGCTGGGAATTGTACTGCCTTGAACATGGAATTCAGCCTGATGGTCAAATGCCAAGTGACAAAACCATCGGCGGTGGGGATGACTCATTCAACACGTTCTTCAGTGAGACTGGGGCTGGCAAACATGTGCCCAGAGCGGTGTTTGTGGACCTGGAGCCCACTGTAGTCGATGAAGTGCGCACAGGGACCTATAGGCAGCTATTCCACCCAGAGCAGCTGATCACCGGGAAGGAAGATGCAGCCAATAATTATGCCAGAGGCCATTACACCATCGGCAAGGAGATTGTCGACCTGGTCCTGGACCGGATCCGCAAACTGGCAGATCTGTGCACGGGGCTGCAGGGCTTCCTCATCTTCCACAGCTTCGGAGGCGGCACCGGCTCTGGGTTTGCATCTCTGCTCATGGAGCGCCTCTCGGTGGACTATGGCAAGAAGTCCAAGCTTGAATTTGCCATTTACCCAGCCCCCCAGGTTTCCACGGCTGTAGTGGAGCCCTACAACTCCATCCTGACCACCCACACAACCCTGGAACATTCTGATTGTGCCTTCATGGTGGACAACGAAGCCATCTACGACATATGTCGGCGCAATCTAGATATCGAGCGGCCCACGTACACCAACCTCAATCGCCTGATCGGACAGATCGTGTCCTCCATCACCGCCTCCCTGCGATTTGATGGGGCCCTGAATGTGGACTTGACAGAATTCCAGACCAACCTGGTCCCGTACCCCCGCATCCACTTCCCCCTGGCCACCTATGCCCCAGTCATCTCAGCCGAGAAGGCCTACCACGAGCAGCTGTCTGTGGCTGAGATCACCAATGCTTGCTTTGAGCCAGCCAACCAGATGGTCAAGTGTGACCCTCGCCATGGCAAGTACATGGCCTGCTGCATGTTGTACAGGGGCGATGTGGTTCCAAAAGACGTCAACGCGGCCATCGCCACCATTAAGACCAAGCGCACCATCCAATTTGTGGATTGGTGCCCAACTGGATTTAAGGTGGGCATCAACTACCAGCCCCCCACCGTCGTCCCTGGGGGAGACCTGGCCAAGGTGCAGCGGGCTGTGTGCATGCTGAGTAACACCACTGCCATCGCCGAGGCCTGGGCCCGCCTAGACCATAAGTTTGATCTCATGTACGCAAAGCGAGCCTTTGTGCACTGGTATGTGGGAGAAGGCATGGAGGAAGGAGAGTTCTCTGAGGCCCGGGAGGACCTGGCAGCGCTGGAGAAAGACTATGAAGAGGTGGGCGTGGATTCTGTGGAAGCAGAGGCTGAAGAAGGGGAAGAATACTGAGTGGGAGACCATGCTGAACGCCATCCCTTTGTATCCTCCCCCTACTATAACATTACAAGGTATGCTTACCTATTAAAGTTTCTGTATTAAACCTC |
PMID - Link | Title |
---|