Retrocopy Name | PCBP2P2 |
|
Species | Rhinolophus ferrumequinum | |
Coordinates | scaffold_m29_p_14:20954418-20954858 UCSC | |
Strand | - | |
Parental Sequence | PCBP2_x4 | |
Parental seq. overlap | 371 bp | |
Parental seq. overlap (%) | 10.2% | |
Genomic Region |
Intragenic (LOC00819) |
|
Retrocopy Summary | PCBP2P2, located on scaffold_m29_p_14:20954418-20954858, is a retrocopy of the parental gene PCBP2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | PCBP2 |
Full Name | N/A |
Also known as | NULL |
Coordinate | scaffold_m29_p_10:52940080-52963100 |
Strand | + |
Gene summary | N/A |
>PCBP2P2 |
TGACCTGGAGGGACCACCTCTAGATGCCTACTCGATCCAAGGACAACACACCATTTCTCCGCTCGATCTGGCCAAGCTGAACCAGGTGGCAAGACAACAGTCTCACTTTGCCATGATGCACGGCGGGACCGGATTCGCCGGAATTGACTCCAGCTCTCCAGAGGTGAAAGGCTATTGGGCAAGTTTGGATGCATCTACTCAAACCACCCATGAACTCACCATTCCAAATAACTTAATTGGCTGTATAATCGGGCGCCAAGGCGCCAACATTAATGAGATCCGCCAGATGTCCGGGGCCCAGATCAAAATTGCCAATCCAGTGGAAGGCTCCTCTGGTAGGCAGGTTACTATCACTGGTTCTGCTGCCAGTATTAGTCTGGCCCAATATCTAATCAATGCCAGGCTTTCCTCTGAGAAGGGCATGGGGTGCAGCTAGAACAG |
>PCBP2_x4 |
CTTTATCCATGGCGACTGCCAACTCTCTCTGCACTTACGCCTGGGCTTTCCAACCAGCCCACTAGGGGCCACTAGTTTCCTCCCTGCCCCCGTGCTGCCGCTCTATCATAGACTTCGCCATCTGCCACCAGCTGTTGTCTCGCTGGTGCCGGCGCTGTCCGTGGGGCCGCTCTAGGCTATTGGGAGGCCGTCCGCTTAGCGTGAGGAAGGTTTGGACGACGCAGTCGCCTCGCCGGCCCCCGGGGCGTTTAGCGCTTCCGGGGTCGGAGGGTGCGCGGGGTTGAAAGCAGGCCGCTCCGCCCCGTCCCCCTCCCAGACcagcagaggcagcagccggagcagccgcagcCTGCGCCCTCTcccgcccgcccgccctccgcccgcccgcccgccctccgccgccctccacccgcccCGGGGTCTCTTtcccccttcctcctcctcctcctccacccccccttcctcctccgcccgcccgcggggcccccctcgccttcccgcccgcccctattgttccgcccccggcctcccgcccttccccttcccgcccgcTCCCCTTTTCCCCTCAGTCGCCTCGCGCCTGCAGTTTTTGGCTTTCACCCCCACCAGTGACCAAAGACTTGACCACTCAAAGTCCAGCTCTCCAGAACACTGCTCGACATGGACACCGGTGTGATTGAAGGTGGATTAAACGTCACTCTCACCATCCGGCTACTTATGCATGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGAGAATCAGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTATCACTTTGGCTGGACCCACTAATGCCATCTTCAAAGCCTTTGCTATGATCATTGACAAACTGGAAGAGGACATCAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAGACCCCCAGTCACTCTAAGGCTGGTGGTCCCTGCTAGTCAGTGTGGCTCTCTCATTGGGAAAGGTGGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTCCCCAACTCAACTGAGCGGGCCATCACTATTGCTGGCATTCCGCAATCCATCATTGAGTGTGTGAAACAGATCTGCGTGGTCATGTTGGAGACTCTCTCCCAGTCCCCTCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCGTCCAGTTCTCCGGTCATCTTTGCAGGTGGTCAGgacaggtacagcacaggcagcgacagtgcgagctttccccacaccaccccgtccatgtgcctcaaccctgacctggagggaccacctctagagGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGACGCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGGGGTTTGGATGCATCTGCTCAGACTACTTCTCATGAACTCACCATTCCAAATGATTTGATTGGCTGCATAATCGGGCGTCAGGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCGAACCCAGTGGAAGGCTCTACTGACAGGCAGGTTACCATCACTGGATCTGCTGCCAGCATCAGCCTGGCTCAGTACCTAATCAATGTCAGGCTTTCTTCGGAGACGGGTGGCATGGGGAGCAGCTAGAACAATGCAGATTTCATCCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTTTAAATAGTTTGTAAATTTTCAGTTTCTACACACACTTTATCATCCACTCGTGATTTTTTAATTAAAGCGTTTTAATTCCTTTCTTTGTTCAGCTGTTAATGCTGAGATCCATATTTAGTTTTATAAGCTTCTCCCTGTtttttttttgttttgttttgtttttgtttttttggctcatgaatttttttttttctgtttGTCATGGAAATGTAAGAGTGGAATATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGATTCATGTGGGTTTTATTCCTGTTGTCTTGCTGTTGTTTTTTGCACCTTTTATCCCTCAAAGGACAAGGACCCTGCGTGGGTTTTGAATATAAGCCTTTATTCCAATTAAGATGTTTTCTTCTGTTTTACCACTCCATCTTTTTTTGTAGCCCTTGATCCTATTTTCCCTTGAGCCTGCATTGCAAAATGACCTAATAGTTATAGCAAGCTGGCTGTGTCCTTGGTTCCAAAGATCGAGGGTTATACATTTTCCTAGGACTGATCTGCAAAGAGTCGGCAAGCACATCCACTGGTGGTGGAGGGGGGGTGAAGGACACACATGCACACACATGGAGGCAGGTGGATGTGTGTCTAACGGATTCAGGGCGCTGGGAATGTCTATCTCCTTGTCCAAGCTAAAAACTTCAGTGTCTGGTTTTTAGTAGCTGCTCATTTACAGACCTCTCCATATTAGGAGTGGGTGTTTTAAGATCTTCTGTCCTAAAGTCCTTCAGAATGAGTTACCTGCTCCTATTTATGCAGATAAATTTAGAAGGTTGGAGTGATGATGGTGTGAAATGATGTTCATTTAGTTAGAGAAGCATAAAAGAAGTAACTTGTCTAGAGCCTTCAGATCATGTCTGGAGTCCAAGGCTCCTATTTCAAACCATGTGTGCTGCCCCATATTTTCACCAAGAAAACCCTCAACAGCTGGGCCTGCATGGAGTTGGTTATATTTCACGGTTTTTCACAGGGGTTACAATATGACAGTCCCCACCCCAATCAAGCACCAAGATAAAAGCAGGGACTTAAACAACACCCCAGTTCTTTAGCCTGAGCCATCACATGCTTTCACAAGCTCCTAACCTCCCCCCAGACCCTAAGCCAGGGCTTGGGCAGAGAAATGGAGGGACAAAGAAATAAAGTTACATTGCCACCTGAGAAACCTCAGAGGGGAGGACCCAGCCTTAGTCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGTAAACGGAAAACAAAAAGTGCAGTTAAGTGGCTCCCTTTCCTTCTCCCCAGGGTTTTTGGGGGAAAGGGTATGGAGGAGCATAGGAAACCAAGTCTGGCTTTCCTATTGCCTGACCACTTGCTGAACTTAATGGGGTGAAGCAGGAAGGGGCGTTTGCCCTTACCACAGCTCTAGGGCCGCCCTTGTCCTTCGTTTCCACAGCTGCCAGTGTCCCTAGAGTGTATCAGGTGAATTGGGCAGGGGTCGGTCTCCCTTGAGCCTAACTTACGGCTGGGACAGCCCTGTCTTTGCTGATTATGTGGCGCatatatattatttatataaatatttctctatgtaCAGGAAGCAGAGTGGCTTTCATGGAGGGAGGGAGGCGGGGGGTTGCAAGGCTTCACCGCTGTGGCAGTTGTCCAGTTCCGTGCTGTCACAGTCTGAGTCCTCGGAATTGGGAGGGCC |
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