| Retrocopy Name | CCDC85AP1 |
|
| Species | Sus scrofa | |
| Coordinates | chr7:120597010-120597248 UCSC | |
| Strand | - | |
| Parental Sequence | XM_021088215.1 | |
| Parental seq. overlap | 196 bp | |
| Parental seq. overlap (%) | 5.1% | |
| Genomic Region |
Intragenic (CCDC85C) |
|
| Retrocopy Summary | CCDC85AP1, located on chr7:120597010-120597248, is a retrocopy of the parental gene CCDC85A. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | CCDC85A |
| Full Name | coiled-coil domain containing 85A |
| Also known as | - |
| Coordinate | chr3:84958384-85165696 |
| Strand | - |
| Gene summary | N/A |
| >CCDC85AP1 |
| CGGACGAGGAGCTGCTGCGCTGGAGCAAGGAGGAGCTGGCGCGGCGGCTGCGGCGCGCGGAGGGCGAGAAGGTGGGCCTCATGCTTGAGCACGGCGGCCTGATGCGCGACGTGAACCGGCGGCTGCAGCAGCACCTGCTGGAGATCCGCGGCCTCAAGGACGTGAACCAGCGGCTGCAGGACGACAACCAGGAGCTGCGCGAGCTCTGCTGTTTCCTCGACGACGACCGGCAGAAGGGG |
| >XM_021088215.1 |
| GGTGTGGGAGGTGAGGccggctgcgggcggccccggctccaggctcctcctcctgccggtccagcctttacccccaccctccaccctccTCGGCTCGGAGCTGCAAATCCTAGGCTTCCCCAGCAACCTGGGAGCGGCATCGGGCACAGTGAAGGCAGTAGGGGGAGCGCAGCCGGGCGGCCGCGCTGATTCCTTGGGCATTAGTGGTGGCATTAGATTAGCCCCGGAGGCACCGCGGAGCCCGGCACGCCCCAGCGGGGGCTAGAGAAGGGAAGCCGGGGCTGTAGCTGGGCGGGGGAGAGGAAAGTGAGCTTGTCTGAGTGCGTGTGTGCGAGAGTGTGGGGGGCGACAGGTTCAATTTAGGGCTGCAGAGAGGGCAGGGGAACCGGGGTGCGGCCCCCGAGGGTCTCCCGCCGCGGCCACCGCTTCCCCGCGCCCCTCACCATGGACTTGCGCGGAGTTGGGATGCGCCTCGGCCGCAGCGCGCGGATGGCTGCCCGGCCCTGGGGGTGCGCGGGCACGCGCGCGGGAATGGCGAGGTAGGATGGCGGTCCAGCGCGACCCCTGCCGCCCCAACCCAGAGGCCCCCGGGCAGTGCAGCTGACTCGCTGGAGCGCTTAGGGGTGTGGGCGGAGGCCGCCCCGCAGCGCCAGCGTCTTCAGGAGTCGCTTCGCCTCTTCCACCCACTCGCACCTGCCACCGTGCGGATACCATGTCGAAGGCGGCAGGAGGTGCATCGGCGGCGGCGGCGGAAAGTTGTCCCCCAACCTCTGCCGGCCAGTCTGCGGCCGCCGCCGTGGAGGACCTATCCAAAGTGTCGGACGAGGAGCTGCTGCAGTGGAGCAAGGAGGAGCTGATCCGCTGCCTGCGGCGCGCAGAGGCCGAGAAGGTGAGCGCGATGCTGGACCACAGCAACCTCATCCGCGAGGTGAATCGCCGCCTGCAGCTGCACCTCGGCGAGATCCGCGGGCTCAAGGATATTAACCAGAAACTCCAGGAGGACAACCAGGAACTGAGGGACCTCTGCTGTTTCCTGGATGATGACCGGCAGAAGGGCAAGAGGGTGTCTCGGGAGTGGCAGAGACTGGGCCGCTACACGGCTGGGGTGATGCACAAGGAAGTGGCCTTATACTTGCAGAAGCTGAAGGAGCTGGAGGTGAAGCAGGAGGAAGTGGTGAAGGAGAATATGGAGCTCAAGGAGCTGTGTGTGCTGCTGGATGAGGAGAAGGGTGCGGGCTGCGCGGGCAGCCGCTGCTCCATCGACAGCCAGGCCAGCCTGTGCCAGCTCACTGCCACCTCAGCGCCCTATGTGCGGGATGTGGGCGATGGCAGCAGCACCTCCAGCACGGGCAGCACCGACAGCCCCGATCACAAACACCATGCCAGCGGAGGCAGCCCTGAGCACTTGCAGAAGCCCCGGGGCGAGGGCAGCCCAGAGCACTCTAAGCACAGGAGCACCAGCCCCGAGCATCTGCAGAAACCCCGGGCCCCAGGGACCCCAGATCACCCCAAAGCACTCAAAGGACCCAGCCCCGAGCACCACAAACCCTTGTGCAAGGGCAGCCCGGAACAGCAAAGGCACCCCCACGCGGGGAGCAGCCCTGAAACCCTGCCGAAGCACGTGCTAAGTGGGAGCCCCGAGCACTTCCAGAAGCACAGGCCCGGAGGCAGCCCCGAGCATGCCAGGCATAGCGGAGGGAGCCCTGAGCATCTTCAGAAACACGCCCTCGGTGGAAGCCTGGAGCATCTACCCAGAGCCAGGGGCACCAGCCCGGAGCACCTCAAACAGCATTATGGGGGAAGCCCGGATCACAAACACGTGggcggaggtggcggcggcagcggcggaggcagcAGGGAGGGCACCCTTCGAAGGCAGGCGCAAGAGGATGTGTCACCCCATCACCGGAATGTCTACAGTGGCATGAACGAATCAACCTTGTCCTATGTTAGGCAGCTGGAGGCAAGAGTCAGACAGCTGGAGGAAGAAAATCGCATGCTGCCCCAGGTTGTATGGAGGAAACTTGGAGATGCTGCAGGTTCGTGTCCTGGAATTAGGCAACATTTGTCTGGGAACCAGTACAAAGGACCAATGTGAGAAGCACTCTCTTTCGAACATGACATCACCACTGCCAGAGTGATAAAAGAGAAGAGTGATTTTCATGATCTTTGAGTAACAGAGTGATTGTACATTGCACATATTTTCCCTCTAAGACATTTAGTATAACTGAAGCTGTATTTTATGTCTCTCACTTAGATGTTCACAACAGTCAATCTCAAGGTAGTTTGGAAAAATCACCATTTTGGTACCAATATTTTCATTAGAACTGAAACATTTTTGACTCTTCGGATCTAAGATTATAATTGGGAAATCTGCGTGATTGGAAGAGTCCAGTAGAGCCTCAGTGGTTTTGATAGAATTGAATCATTGCATATAATGGTGGGAGTGTTCTGCCATGTGGTTCAAGATAAAAGCTGATTTCCAGCTTCCCACGTTGGGAGTTGGTGACCTAGTTCTTATATTTTAGTCAATAAGACACTAGTTCCTGATGCATTATTAATTTGGATGCAAGATAAGGTTAGGTTTCTGGGATTTTTTTTTGACTTTTGAGGTGCTAAAAATAACATATAAATTTTCCTTACCAGCTAGAAGGGTAGCAAGACTTTGTAGAGTGCTTATCAGAGAGTACCATTTATTTCAGTTGATCAAAATAAATATATCTGTTCTTTTCACCTTGATGTATTGTTCATGAAGACACATCTTGGGGACATATCAACCTCCATCTTCATTCAGTGTATTCATTGATGTTACTATTAACAATTTCAAGCAAACATAATTTTTCTAAGTGTTTCCAGCTGTGAGATGTCACTTTCTACAATTTAGTTTCTAGACATGCTGTTATATTTAATAAACTTTCTGTAAACTTTAAAATATTGCACTGCATTTATGAAAAAAGCTTTCTTTGCCTACAGCAGCTATCTAACATTTTATGAAACTGACGCATGTCCTTCATTATTGAAGCTAAAAGCTCTTGTTCAGATTGCTTGAGGTTTGGAAAGGAGGTGTGCTAGCTTTGCTTAGTTTTCATTTTTGGTTATATATATATATAATAATAGACTGTGTGTATTGGAAATGCTATGATAGGTATTTTGTGTTTATCCAAATGCAATGATAGTTTCTTGTATGAATGTGCAAGAGGCCTGTGACAGAATGCTAAGTTTTTATTGTAGTTTAAGATTATAAAAGTAGGAATGCAACAATTCCCAGTTTTCAGATTTCCCCTAAATTACTCAGATTTGATTCATAGCAGGTATTCTGTTGTTGCTCTTATTTTTAAATGGGATCATTACACATGTATTAGTTGTTATTGGTGAAGGAATGTGAAGGAGTTTCATTATTTTTTAAACGTTATTGTGATGAAAAAGCAGCCCTCTATTTTCAAAATATTTATGAATTAATTTGCTATAGAATTATCTCTCTAATTATCATAATTGGGTTACCATTTAAGTTTTTCTTTTAAAATGTTGTTTTAATTATATTATTACTCTATAAAAGAAAATTGCTTGCTATATTTACACTTTCTCTTGAAAAGCTTTCACCCTTAAATTGTTGTATTCCTACACTCTGAAGACATTTAAAACAAGTTTTTGTGGCTGCAGTAGAGCCTGCTGAAGCTAATACAAGGAACACTGGTCTTTTGACAAAATACTTGTGTAAATTTTGATACTGTATTAAAACTATTTTTTTAAAGTTCTGCATAAAATTGAGTATCAAGTATATGTGTTCATCTTAGCAATGGTAATAAATTATTTAATCTCAA |
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