| Retrocopy Name | Cstf2P1 |
|
| Species | Rattus norvegicus | |
| Coordinates | chr1:249576687-249576918 UCSC | |
| Strand | + | |
| Parental Sequence | NM_001131014.1 | |
| Parental seq. overlap | 190 bp | |
| Parental seq. overlap (%) | 4.4% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Cstf2P1, located on chr1:249576687-249576918, is a retrocopy of the parental gene Cstf2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Cstf2 |
| Full Name | cleavage stimulation factor subunit 2 |
| Also known as | - |
| Coordinate | chrX:104882726-104909746 |
| Strand | + |
| Gene summary | Predicted to enable mRNA binding activity. Involved in cellular response to nerve growth factor stimulus. Predicted to be located in cleavage body. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human CSTF2 (cleavage stimulation factor subunit 2). [provided by Alliance of Genome Resources, Apr 2022] |
| >Cstf2P1 |
| GATGCAGGGGGCTGGCATGCAAGGAGCCAGTAAGCAAGGTGCGGGCCAGCCTAGTAGTTTTAGCCCGGGGCAAAGCCAGGTAACTCCTCAAGATCAAGAAAAAGCAGCTTTGATCATGCAGGTTCTTCAGCTGACTGCAGATCAGATTGCCATGCTGCCTCCTGAGCAAAGGCAGAGCATTTTGATTTTAAAGGAACAAATCCAGAAATCTACGGGTGCTTCTTGAAAGGTT |
| >NM_001131014.1 |
| GGGTGAGCCATGGCGGGTTTGCCTGTTAGAGACCCTGCGGTGGATCGTTCTCTGCGTTCTGTATTCGTGGGGAACATTCCTTATGAAGCTACTGAAGAACAACTGAAGGACATCTTCTCTGAGGTTGGGCCTGTTGTTAGTTTCAGATTGGTATACGATAGGGAGACAGGAAAACCAAAGGGTTATGGCTTCTGCGAATACCAAGACCAAGAGACAGCACTTAGTGCCATGCGGAACTTGAATGGGCGTGAATTCAGTGGGAGAGCACTTCGAGTGGACAATGCTGCCAGTGAAAAGAACAAAGAGGAACTGAAGAGCCTTGGCACTGGTGCACCTGTCATAGAGTCACCTTATGGAGAAAGCATCAGCCCTGAGGATGCCCCTGAATCCATTAGCAAAGCTGTTGCCAGTCTTCCGCCAGAACAGATGTTTGAACTGATGAAACAAATGAAGCTCTGTGTCCAGAATAGTCCCCAGGAAGCACGAAACATGTTGCTTCAGAACCCACAGCTGGCTTATGCTTTGCTGCAAGCACAGGTAGTGATGAGAATTGTGGATCCTGAGATTGCCCTGAAAATTCTGCACCGCCAGACAAATATCCCAACGCTGATTTCAGGCAACCCTCAGCCAGTCCATGTTGCCGGACCTGGCTCAGGACCCAATGTTTCAATGAACCAGCAGAATCCTCAGGCCCCTCAGGCTCAATCTTTGAGTGGAATGCATGTCAATGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCACCAGTGCAGATGGCAGCTGCTGTAGCAGGACCTGGCCCTGGTTCCTTAGCCCCTGCAGGAGTCATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCTGCCAACGTCCCAACTCCTCGTGGTCTTTTAGGTGATGCTCCCAATGATCCACGGGGAGGCACTTTAATGACCGTAACTGGAGAAGTAGAACCTAGAGCTTACCTGGGACCACCACCACCACCTCATCAGGGCCCACCGATGCACCACGTTCCTGGCCATGAAGGTCGTGGACCACCACCGCATGACATGAGAGGAGGACCGTTAGCTGAGCCCAGACCGTTAATGGCAGAGCCAAGAGGACCTATGCTAGATCAGAGGGGTCCACCGTTGGATGCCAGAGGTGGAAGAGATCCCCGAGGATTAGATGCACGAGGGATGGAGGCCAGAGCCATGGAAGCCAGAGGACTGGAAGCCCGTGCCATGGAAGCCCGTGCCATGGAAGCCCGTGCCATGGAAGCTCGTGCCATGGAGGCCCGAGCCATGGAGGCTCGTGCCATGGAGGCCAGAGGCATGGATACCAGAGGCCCAGTACCTGGACCTAGAGGACCTATACCTAGTGGAATCCAAGGCCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGTCCCAGTCATgcagggagcaggcatgcaaggagcaagcatgcaaggtggaagCCAGCCTGGTGGCTTTAGTCCTGGACAGAGCCAAGTCACACCCCAGGATCATGAGAAGGCTGCTTTGATTATGCAGGTCCTTCAACTCACTGCAGACCAGATTGCCATGCTGCCTCCTGAGCAAAGACAGAGCATCCTAATCTTAAAGGAACAGATACAGAAATCCACCGGGGCACCTTGAAAGGTTCTCAAAAATACCTGGCAACAAATCTGGAAATGTAATTCCATAACATTGTTGAAATGTTGAAAACATAGTGACTTCTGCATCTAACCCCCCTGGATGACTCAGATTGGTACCAGGTGGAGGACCTGCATCACCATTTCTCCAAAGGAAAACAGTTCATTCTGATGTCGTAGTTTGTATATTTTCTGTGATGTTAAATAAACATTGAACATAAGTTTAACATATTACAAATTGAAATACATAATCCTTTTGCTGTTAAGAAGCTAACACCAAGGATAAAAGCTTAGCTGTGATTTCTGACCTTACTGCAGTGTCATTCTTTAATCTTACATTGCCGTAGCTCTATTCTTACTTTAGCATAAACATTTATTCTTCTTAATGATACTTGAGAATTTCTCAGAAACAATGTTTTTAGGAACTTTGTTTTTTGTTGAATTTGCTTTCAGCAAGGTAATAAGACTTTGGCCCTTGAAAACTTTCCAGTCTTAGAGTTTTCTGGGAGAAAAAAAGCATGTGGTTAGAACTACAAACAATTAGAAGACCAACAAGCGAAGAGCATACCACAGGGGTGTGTTTGGTTTAAGGAATGCCAATTCTCAAACTGTGGTTTTAGTCAGTTGCAGGTCTGGACATACATAAGACAAAGATTGTTTTGGCACTGGTTTGAATGTGAATCAACAACCTAAGACTGTTGTAAAGCTCTTCTGTCTATGTATCAACTTTACAAGGTTTTCTACATGTTCAAATTTAATAAAGAAAACCAAGTGAACAAACTATATTCCATTCTTTCAGAAAATTGCAAAGCTTTCAGCCCTATCATCTTCTCTAAATCCATTCCAAAAACTCCCAACAGAAAACCCTAAAACTTTTACATTTTCAAGTCTTTTAAGAGGACCAAGTACAGGATGGCAAATTGCCCATTATGGTTGCCTGCTACTTTCAAAGTACTACCTACTTGAAAGGTAATTAGTGCCATTAGCCTGTGCTAACTTGCAGGTTGTCTTGCCTTTTGTTCTCCCGTAGTGGCATTAAGGAGGAACATGGTTTCTCTCTACCAGGTCCACCTCAAGACATTTGAAGAGTTGCCGTAATAATTAGTGAAGCTCACTAGCACTAATTGTGAGCTCGTTTGTATTCCCAGAGCCCTACTCTGCATTAGGATTATGGGCACGTGAACTAAAATCACTACTTACGGCATAAAAAGCATAATCATGCCAAGGAAAAGAAAGCAAAGCTATTAAAATGGAGGGATTCTTCTCCAGACATTGATAATGAAAATTTGCTGGATATGTCATACTATAAGCTATGAAGAAAAGCGCAGAACAACAAGCACTCCTACCTGTTCCACTCATCCCCAGTTCAATCGGGTGTTAATTATGCATGCAGTTCATTGTTTTCATTACCTTCTGTGCCTCCTGCATAAGCAGTCCTTGATGTGTTGGTTTTGACAGCTGTTAGACTTAAAAGCACCAATGTATTTAGATGCAGAGACAAAGAGGAAAATATTTCTAGTTGGGAGCTTGGGTTTTACACAACCAATTCCAAATCAAGATAAGTAATGCTGAAGTTATTTGGAAAACAGTTGTCTAACAGAAACTATATCCTGAGAATCCAGCAGTTTCCCAAAGCCTTCTTAAACTTAATTTGGTTAGTAGACCTCAGGTGAATAAGTTGACAAGAGCGGTGGCATCCCAGTTCATCATTATGGAAACACTCATCAGTGgtttgtttgtttgtttgtttgtttgtttgCTGTTATTTTTACTGTTGTAATAATTCAATTAGCTACTCCACGTTTATGATCTGCCTTTATATGTTCAGACTAATGACTGACAAGTGATCCCACTGATCCTTCAAGCTATAGGTACTTAGATAAATTACGAAAACAAAGTTGTTCACTCTTGATCTATGGTACAAATTAGATGGTCCAGTGCTATCTATAGATTCATTCTGTTAAATGTATGAGGTCCATTGCCTGAGTACAATGAAGTGTGGGGGTTTTTTTCTTCCTCAAGGAGCCTGCACCTTTTCTTGAAATCCATCATAACTAACATCCCAGAGCCAGTGTGGTTATTGTCCTGGTGGATAGGAAAAATGAACATGTTTGTAGGAAAAAGAATGACATCTTAGTGGATGATTCCTCATTGAGTAAGACCTGGAAAACAGTCAAAATTATAACTTTTTATTTTCTTTTTATAACACATTCATAAACAAAACTCTTTAACAACAACAACAAAAAATGGAAAGAGCTTCTGTTAAATTACCCCACGATGTAGGTCAGGCCTTTCCAGTTATTTCAAACAATACAAACTGGCAATATAGTTGGCTTCTAACTATAATACAAATTTGATTCCAGTTAATATACTTAAGATATTACTAGGGAAAGTCAGCAAAATTGTTCAATAAGCAAAGATGAAGATTATTTTGGCACAGTAAAGTATAAATTGTTGGTCACACTGGATGATAAGCTCATGTATAACGATGTACTTAGTGGGTATGATATGGGAGTGGGAATCTTGGTAATTTTATGTTTATTATTTATGATTATTGTTTTGTCGTGGATTCAATAAATATTTTAAAATCA |
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