| Retrocopy Name | CSTF2P1 |
|
| Species | Homo sapiens | |
| Coordinates (hg38) | chr10:51697690-51697887 UCSC | |
| Coordinates (T2T) | chr10:52546709-52546906 UCSC | |
| Coordinates (hg19) | chr10:53457450-53457647 UCSC | |
| Strand | - | |
| Parental Sequence | NM_001306209.2 | |
| Parental seq. overlap | 180 bp | |
| Parental seq. overlap (%) | 7.1% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | CSTF2P1, located on chr10:51697690-51697887, is a retrocopy of the parental gene CSTF2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | CSTF2 |
| Full Name | cleavage stimulation factor subunit 2 |
| Also known as | CstF-64 |
| Coordinate | chrX:100820391-100841520 |
| Strand | + |
| Gene summary | This gene encodes a nuclear protein with an RRM (RNA recognition motif) domain. The protein is a member of the cleavage stimulation factor (CSTF) complex that is involved in the 3' end cleavage and polyadenylation of pre-mRNAs. Specifically, this protein binds GU-rich elements within the 3'-untranslated region of mRNAs. [provided by RefSeq, Jul 2008] |
| >CSTF2P1 |
| GGTGGAAGCCAGCCTAGCAGTTTTAGTCCTGGGCAGAGCCAGGTCACTCCACAGGATCAGGAGAAGGCAGCTTTGATCATGCAGGTTCTTCAACTGACTGCAGATCAGATTGCCATGCTGCCCCCTGAGCAAAGGCAGAGTATCCTGATTTTAAAGGAACAAATCCAGAAATCCACTGGAGCGTCTTGAAAGGTTTTA |
| >NM_001306209.2 |
| GCACCGGAAGCCGACTCAACAGAGCTATGGCGGGTTTGACTGTGAGAGACCCAGCGGTGGATCGTTCTCTACGTTCTGTGTTCGTGGGGAACATTCCTTATGAAGCTACTGAAGAGCAGTTGAAGGACATCTTTTCTGAGGTTGGACCTGTTGTTAGTTTCAGATTGGTATACGATAGAGAGACAGGAAAGCCAAAGGGTTATGGCTTCTGTGAATACCAAGACCAAGAGACAGCACTTAGTGCCATGCGGAACCTGAATGGGCGCGAATTCAGTGGGAGAGCACTTCGAGTGGACAATGCTGCCAGTGAAAAGAACAAAGAAGAGCTGAAGAGCCTTGGCACTGGTGCCCCTGTCATTGAGTCACCTTATGGAGAGACCATCAGTCCTGAGGATGCCCCTGAGTCCATTAGCAAAGCAGTTGCCAGCCTTCCACCAGAGCAGATGTTTGAGCTGATGAAACAAATGAAGCTCTGTGTCCAGAATAGTCCCCAGGAGGCACGGAACATGTTACTTCAGAACCCTCAACTGGCTTATGCTTTGCTGCAAGCACAGGTAGTGATGAGAATTGTGGATCCGGAAATTGCCCTGAAAATTCTGCATCGCCAGACAAATATCCCAACGCTGATTGCAGGCAACCCTCAGCCAGTCCATGGTGCTGGGCCTGGCTCAGGATCCAATGTGTCAATGAACCAGCAGAATCCTCAGGCCCCTCAGGCCCAGTCTTTGGGTGGAGTTCCAGCACCAGGGCAAATGCCAGCTGCTGTCACAGGACCTGGCCCTGGTTCCTTAGCTCCTGGAGGAGGAATGCAGGCTCAGGTTGGAATGCCAGGAAGTGGACCAGTGTCCATGGAACGGGGGCAAGTGCCGATGCAAGACCCCAGAGCAGCTATGCAGCGGGGATCCTTGCCTGCGAATGTCCCAACCCCTCGAGGCTTGTTAGGAGATGCTCCGAATGATCCACGGGGAGGCACTTTACTTTCTGTAACTGGAGAGGTAGAGCCTAGAGGTTACTTGGGACCACCTCATCAGGGTCCACCCATGCACCATGTCCCTGGCCATGAGAGCCGAGGACCACCCCCACATGAACTGAGGGGAGGGCCATTACCCGAGCCCAGACCTCTAATGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGGGTCCACCCTTGGATGGCAGAGGTGGAAGGGATCCCCGAGGAATAGATGCACGAGGGATGGAGGCCCGAGCCATGGAGGCAAGAGGGTTAGATGCCAGAGGATTAGAGGCCCGTGCAATGGAGGCCCGTGCGATGGAAGCTCGTGCAATGGAGGCCCGAGCGATGGAGGCCCGTGCAATGGAAGTCCGAGGGATGGAGGCCAGAGGCATGGATACCAGAGGCCCAGTGCCTGGCCCCAGAGGACCTATACCTAGTGGAATGCAGGGTCCCAGTCCAATTAACATGGGGGCGGTTGTCCCCCAGGGATCCAGACAGGTCCCAGTCATGCAGGGAACAGGAATGCAAGGAGCAAGTATACAGGGTGGAAGCCAGCCTGGCGGCTTTAGTCCCGGGCAGAACCAAGTCACTCCACAGGATCATGAGAAGGCTGCTTTGATTATGCAGGTTCTACAACTGACTGCAGACCAGATTGCCATGTTGCCTCCTGAGCAAAGGCAGAGTATCCTGATTTTAAAGGAACAAATACAGAAATCCACTGGAGCACCTTGATAGGTTTTCAAAAATACCTGGCAAGAAATCTGGAAATTCTATAATTTTGTTGAAATATTGAAAAAAGATGACCTGCATCCTAACCCTTGAATGACTCAAATCAGTGCCAGGTGGAGGACTCCCATCACCTTCTCTCAGAACAAAATCACTTCATTTTATTGTCTTAGTTTGTATATTTTCTGTGACTTGAAATAAACTTTGAACACAATTTTAGTACACTGCAAATTGATACACATGACCTTTTTGCTTTTAAAAAGCTTAACACTAAGGGTGAAACCTTAGATGTGTTTTCTACCCTTACTGCAGTATTGTACTTTAACATATTGCCATAGTTTTGTTTTTAAGTTAACCACTTATTCTTCTTGATGATATTTGAGAATTTCTCAGAAGCAATGTTTTCTGGAACTTGGTTTTTGTTTAGTTTGCTTCCAGTAAGAATTATTATAAGGCTTTGCCCTCTGAAAATATTCTAGCACTTCGGAGTCTTCTAGGAGAAAATATCACATGCTTAGAGCTATAAAATGGTCAGAAGGCTAACAGAGCAAAGAGCCTAGCACAGCTGTGTGTTTAGTTTAGAAAAATCCAAATATCAAAATGCATTTGTTTCAATAGCAGGTCTGAACATGTATAATTCAGAGTTAAGACAAAAATTGTTTTAGCACTGGTTTGAGTGTGTCAGCAACACAAGAGACTGTTGACATTTACTTGTGTGTTCTTAAACTTATCAGTCTAGGCAGTCAACTTTGAAAGTTTAAAAAGCCACTGATTTTTCACATGCTCAAGATGAAATAAAAACAGAAATCAAATGAA |
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